Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0357
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 222 2e-58
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 222 2e-58
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 222 2e-58
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 222 2e-58
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 222 2e-58
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 222 2e-58
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 222 2e-58
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 222 2e-58
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 222 2e-58
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 222 2e-58
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 218 3e-57
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 137 8e-33
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 110 8e-25
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 105 2e-23
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 105 2e-23
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 104 5e-23
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 104 5e-23
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 96 2e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 79 2e-15
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 39 0.003
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 39 0.003
U80844-4|AAB37974.1| 192|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.9
Z81542-3|CAB04415.1| 308|Caenorhabditis elegans Hypothetical pr... 27 9.1
U52517-1|AAA97927.1| 846|Caenorhabditis elegans hum-3 protein. 27 9.1
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 9.1
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 9.1
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 9.1
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 9.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 222 bits (543), Expect = 2e-58
Identities = 106/133 (79%), Positives = 106/133 (79%)
Frame = +2
Query: 254 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 433
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 434 APLNPKANREKMTQIMFETFNTPAMTCHPSXXXXXXXXXXXXXXXXDSRDSVFHTVPIYE 613
APLNPKANREKMTQIMFETFNTPAM DS D V HTVPIYE
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYE 168
Query: 614 GYALPHAILAFGL 652
GYALPHAIL L
Sbjct: 169 GYALPHAILRLDL 181
Score = 105 bits (253), Expect = 2e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +3
Query: 111 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 263
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 222 bits (543), Expect = 2e-58
Identities = 106/133 (79%), Positives = 106/133 (79%)
Frame = +2
Query: 254 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 433
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 434 APLNPKANREKMTQIMFETFNTPAMTCHPSXXXXXXXXXXXXXXXXDSRDSVFHTVPIYE 613
APLNPKANREKMTQIMFETFNTPAM DS D V HTVPIYE
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE 168
Query: 614 GYALPHAILAFGL 652
GYALPHAIL L
Sbjct: 169 GYALPHAILRLDL 181
Score = 104 bits (250), Expect = 5e-23
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +3
Query: 111 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 263
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 222 bits (543), Expect = 2e-58
Identities = 106/133 (79%), Positives = 106/133 (79%)
Frame = +2
Query: 254 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 433
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 434 APLNPKANREKMTQIMFETFNTPAMTCHPSXXXXXXXXXXXXXXXXDSRDSVFHTVPIYE 613
APLNPKANREKMTQIMFETFNTPAM DS D V HTVPIYE
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYE 168
Query: 614 GYALPHAILAFGL 652
GYALPHAIL L
Sbjct: 169 GYALPHAILRLDL 181
Score = 105 bits (253), Expect = 2e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +3
Query: 111 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 263
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 222 bits (543), Expect = 2e-58
Identities = 106/133 (79%), Positives = 106/133 (79%)
Frame = +2
Query: 254 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 433
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 434 APLNPKANREKMTQIMFETFNTPAMTCHPSXXXXXXXXXXXXXXXXDSRDSVFHTVPIYE 613
APLNPKANREKMTQIMFETFNTPAM DS D V HTVPIYE
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYE 168
Query: 614 GYALPHAILAFGL 652
GYALPHAIL L
Sbjct: 169 GYALPHAILRLDL 181
Score = 105 bits (253), Expect = 2e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +3
Query: 111 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 263
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 222 bits (543), Expect = 2e-58
Identities = 106/133 (79%), Positives = 106/133 (79%)
Frame = +2
Query: 254 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 433
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 434 APLNPKANREKMTQIMFETFNTPAMTCHPSXXXXXXXXXXXXXXXXDSRDSVFHTVPIYE 613
APLNPKANREKMTQIMFETFNTPAM DS D V HTVPIYE
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYE 168
Query: 614 GYALPHAILAFGL 652
GYALPHAIL L
Sbjct: 169 GYALPHAILRLDL 181
Score = 105 bits (253), Expect = 2e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +3
Query: 111 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 263
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 222 bits (543), Expect = 2e-58
Identities = 106/133 (79%), Positives = 106/133 (79%)
Frame = +2
Query: 254 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 433
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 434 APLNPKANREKMTQIMFETFNTPAMTCHPSXXXXXXXXXXXXXXXXDSRDSVFHTVPIYE 613
APLNPKANREKMTQIMFETFNTPAM DS D V HTVPIYE
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE 168
Query: 614 GYALPHAILAFGL 652
GYALPHAIL L
Sbjct: 169 GYALPHAILRLDL 181
Score = 103 bits (246), Expect = 2e-22
Identities = 44/51 (86%), Positives = 50/51 (98%)
Frame = +3
Query: 111 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 263
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 222 bits (543), Expect = 2e-58
Identities = 106/133 (79%), Positives = 106/133 (79%)
Frame = +2
Query: 254 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 433
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 434 APLNPKANREKMTQIMFETFNTPAMTCHPSXXXXXXXXXXXXXXXXDSRDSVFHTVPIYE 613
APLNPKANREKMTQIMFETFNTPAM DS D V HTVPIYE
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYE 168
Query: 614 GYALPHAILAFGL 652
GYALPHAIL L
Sbjct: 169 GYALPHAILRLDL 181
Score = 105 bits (253), Expect = 2e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +3
Query: 111 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 263
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 222 bits (543), Expect = 2e-58
Identities = 106/133 (79%), Positives = 106/133 (79%)
Frame = +2
Query: 254 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 433
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 434 APLNPKANREKMTQIMFETFNTPAMTCHPSXXXXXXXXXXXXXXXXDSRDSVFHTVPIYE 613
APLNPKANREKMTQIMFETFNTPAM DS D V HTVPIYE
Sbjct: 65 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYE 124
Query: 614 GYALPHAILAFGL 652
GYALPHAIL L
Sbjct: 125 GYALPHAILRLDL 137
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 222 bits (543), Expect = 2e-58
Identities = 106/133 (79%), Positives = 106/133 (79%)
Frame = +2
Query: 254 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 433
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 434 APLNPKANREKMTQIMFETFNTPAMTCHPSXXXXXXXXXXXXXXXXDSRDSVFHTVPIYE 613
APLNPKANREKMTQIMFETFNTPAM DS D V HTVPIYE
Sbjct: 95 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYE 154
Query: 614 GYALPHAILAFGL 652
GYALPHAIL L
Sbjct: 155 GYALPHAILRLDL 167
Score = 67.3 bits (157), Expect = 9e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 165 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 263
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 37
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 222 bits (543), Expect = 2e-58
Identities = 106/133 (79%), Positives = 106/133 (79%)
Frame = +2
Query: 254 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 433
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 434 APLNPKANREKMTQIMFETFNTPAMTCHPSXXXXXXXXXXXXXXXXDSRDSVFHTVPIYE 613
APLNPKANREKMTQIMFETFNTPAM DS D V HTVPIYE
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYE 168
Query: 614 GYALPHAILAFGL 652
GYALPHAIL L
Sbjct: 169 GYALPHAILRLDL 181
Score = 105 bits (253), Expect = 2e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +3
Query: 111 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 263
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 218 bits (533), Expect = 3e-57
Identities = 101/128 (78%), Positives = 105/128 (82%)
Frame = +2
Query: 254 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 433
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 434 APLNPKANREKMTQIMFETFNTPAMTCHPSXXXXXXXXXXXXXXXXDSRDSVFHTVPIYE 613
APLNPK+NREKMTQIMFETFNTPAM + D+ D V HTVPIYE
Sbjct: 108 APLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYE 167
Query: 614 GYALPHAI 637
GYALPHAI
Sbjct: 168 GYALPHAI 175
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = +3
Query: 117 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 263
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 137 bits (331), Expect = 8e-33
Identities = 61/126 (48%), Positives = 82/126 (65%), Gaps = 1/126 (0%)
Frame = +2
Query: 263 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAP 439
D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+AP
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAP 113
Query: 440 LNPKANREKMTQIMFETFNTPAMTCHPSXXXXXXXXXXXXXXXXDSRDSVFHTVPIYEGY 619
LNP NRE+ +I FETFN PA+ DS D V H VPI +G+
Sbjct: 114 LNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGF 173
Query: 620 ALPHAI 637
A+ HAI
Sbjct: 174 AMKHAI 179
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +3
Query: 135 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 251
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 110 bits (265), Expect = 8e-25
Identities = 56/132 (42%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Frame = +2
Query: 239 RDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 415
R G KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 416 PVLLTEAPLNPKANREKMTQIMFETFNTPAMTCHPSXXXXXXXXXXXXXXXXDSRDSVFH 595
+LLTE PLNP +NREKM Q+MFE + ++ DS D V H
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTH 165
Query: 596 TVPIYEGYALPH 631
P+YEG+AL H
Sbjct: 166 ICPVYEGFALHH 177
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 135 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 227
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 105 bits (253), Expect = 2e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +3
Query: 111 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 263
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 254 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 367
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 105 bits (253), Expect = 2e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +3
Query: 111 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 263
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 254 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 367
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 104 bits (250), Expect = 5e-23
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +3
Query: 111 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 263
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 254 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 367
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 104 bits (250), Expect = 5e-23
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +3
Query: 111 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 263
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +2
Query: 254 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 358
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 95.9 bits (228), Expect = 2e-20
Identities = 52/134 (38%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Frame = +2
Query: 263 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 439
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE P
Sbjct: 64 DFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPP 123
Query: 440 LNPKANREKMTQIMFETFNTP--------AMTCHPSXXXXXXXXXXXXXXXXDSRDSVFH 595
LN NRE +IMFE+FN P + S DS D V H
Sbjct: 124 LNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTH 183
Query: 596 TVPIYEGYALPHAI 637
+P+ +GY + I
Sbjct: 184 CIPVADGYVIGSCI 197
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 111 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 218
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/106 (34%), Positives = 58/106 (54%)
Frame = +2
Query: 323 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 502
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 503 AMTCHPSXXXXXXXXXXXXXXXXDSRDSVFHTVPIYEGYALPHAIL 640
A + DS + VP+++GYA+ HA++
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVV 199
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 120 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 218
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +2
Query: 227 PPSGRDGRYGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRV 400
P S ++ +K +V E + +L Y PIE G V NWD ++IW TF + V
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDV 87
Query: 401 APEEHPVLLTEAPLNPKANREKMTQIMFETF 493
+ LT+ A + ++I+F+ F
Sbjct: 88 EASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +2
Query: 227 PPSGRDGRYGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRV 400
P S ++ +K +V E + +L Y PIE G V NWD ++IW TF + V
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDV 87
Query: 401 APEEHPVLLTEAPLNPKANREKMTQIMFETF 493
+ LT+ A + ++I+F+ F
Sbjct: 88 EASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U80844-4|AAB37974.1| 192|Caenorhabditis elegans Hypothetical
protein C07D8.2 protein.
Length = 192
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 251 YGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 430
+GQ +G A + G L+ P+EH I T + + +L P E P+L+
Sbjct: 66 HGQHGQQLGAPAHTNGGTTRLQQPLEHRIQTTTQGVLQ----GKREQLEQGPTETPLLVQ 121
Query: 431 EAP 439
+AP
Sbjct: 122 QAP 124
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 165 KAGFAGDDAPRAVFPSIVGRPRHQG 239
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z81542-3|CAB04415.1| 308|Caenorhabditis elegans Hypothetical
protein F49A5.4 protein.
Length = 308
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 561 YSCWTPATVFSTPCPFTRDTHFPTPFLRL 647
+ C PAT++ C + D + TP+ L
Sbjct: 177 FVCELPATIYDNTCEYNYDNYCYTPYFEL 205
>U52517-1|AAA97927.1| 846|Caenorhabditis elegans hum-3 protein.
Length = 846
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = -1
Query: 638 EWRGEVRIPRKWARCGKHCRG----SPARIPVVRRDGVQRE 528
+WR VR PRK C CR S A V RR+ +R+
Sbjct: 758 KWRKNVRRPRKSTSCNWRCRSRSSPSEAEEEVKRRNKEERD 798
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 190 ASSPAKPALHIPEPLSTTNAATSS 119
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 190 ASSPAKPALHIPEPLSTTNAATSS 119
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 190 ASSPAKPALHIPEPLSTTNAATSS 119
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 190 ASSPAKPALHIPEPLSTTNAATSS 119
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,422,997
Number of Sequences: 27780
Number of extensions: 408704
Number of successful extensions: 1304
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1278
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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