Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0355
(671 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein. 37 0.076
BC146674-1|AAI46675.1| 788|Homo sapiens Unknown (protein for MG... 34 0.40
BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein. 34 0.53
BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein. 34 0.53
Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein. 33 1.2
X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein. 33 1.2
X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein. 33 1.2
S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain pro... 33 1.2
BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein. 33 1.2
AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein. 33 1.2
AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein p... 33 1.2
BC009732-1|AAH09732.1| 354|Homo sapiens Unknown (protein for IM... 32 1.6
AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple ... 31 2.8
AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein. 31 2.8
BC047881-1|AAH47881.1| 413|Homo sapiens family with sequence si... 31 3.8
AL138824-5|CAI12251.1| 413|Homo sapiens family with sequence si... 31 3.8
AF097027-1|AAF07850.1| 413|Homo sapiens autosomal highly conser... 31 3.8
AF097026-1|AAF07849.1| 413|Homo sapiens autosomal highly conser... 31 3.8
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 31 5.0
AK097452-1|BAC05058.1| 225|Homo sapiens protein ( Homo sapiens ... 30 6.6
>X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein.
Length = 2628
Score = 36.7 bits (81), Expect = 0.076
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -3
Query: 177 SSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYIL 34
SSQ+ + FDG GY+ + L Q+++ F T++PNGL+ L
Sbjct: 2300 SSQNEDPSFHFDGSGYSVVEKS--LPATVTQIIMLFNTFSPNGLLLYL 2345
>BC146674-1|AAI46675.1| 788|Homo sapiens Unknown (protein for
MGC:164982) protein.
Length = 788
Score = 34.3 bits (75), Expect = 0.40
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -3
Query: 279 QDPARVSIARWLPTTAGTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYL 103
Q P++ + A L + GT+ S+ G P+ ++ + S FDGR + GR YL
Sbjct: 719 QAPSKPAQALLLNSIQGTEGSIEGFLEAPKMEMSQAPSSVMSLHFDGRAQDSRTGRDYL 777
>BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein.
Length = 559
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 147 FDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYILKASVFEA 13
FDG GYA + GY + L FRT + NG++ + + +A
Sbjct: 379 FDGSGYAALVKEGYKVQSDVNITLEFRTSSQNGVLLGISTAKVDA 423
>BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein.
Length = 747
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 147 FDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYILKASVFEA 13
FDG GYA + GY + L FRT + NG++ + + +A
Sbjct: 567 FDGSGYAALVKEGYKVQSDVNITLEFRTSSQNGVLLGISTAKVDA 611
>Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein.
Length = 1823
Score = 32.7 bits (71), Expect = 1.2
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 192 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYIL 34
RDKL +QS Y FDG GYA + R Q + + RT A NGLI ++
Sbjct: 1037 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1091
>X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein.
Length = 1816
Score = 32.7 bits (71), Expect = 1.2
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 192 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYIL 34
RDKL +QS Y FDG GYA + R Q + + RT A NGLI ++
Sbjct: 1030 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1084
>X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein.
Length = 1581
Score = 32.7 bits (71), Expect = 1.2
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 192 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYIL 34
RDKL +QS Y FDG GYA + R Q + + RT A NGLI ++
Sbjct: 795 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 849
>S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain protein.
Length = 1816
Score = 32.7 bits (71), Expect = 1.2
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 192 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYIL 34
RDKL +QS Y FDG GYA + R Q + + RT A NGLI ++
Sbjct: 1030 RDKLAFTQSRAASYFFDGSGYAVVRDIPRRGKFGQVTRFDIEVRTPADNGLILLM 1084
>BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein.
Length = 1816
Score = 32.7 bits (71), Expect = 1.2
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 192 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYIL 34
RDKL +QS Y FDG GYA + R Q + + RT A NGLI ++
Sbjct: 1030 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1084
>AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein.
Length = 1823
Score = 32.7 bits (71), Expect = 1.2
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 192 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYIL 34
RDKL +QS Y FDG GYA + R Q + + RT A NGLI ++
Sbjct: 1037 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1091
>AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein
protein.
Length = 1852
Score = 32.7 bits (71), Expect = 1.2
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 192 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYIL 34
RDKL +QS Y FDG GYA + R Q + + RT A NGLI ++
Sbjct: 1066 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1120
>BC009732-1|AAH09732.1| 354|Homo sapiens Unknown (protein for
IMAGE:3877337) protein.
Length = 354
Score = 32.3 bits (70), Expect = 1.6
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -3
Query: 270 ARVSIARWLPTTAGTKSSLTGNSTEPRDKLISSQSGPQEYRF 145
A VSIA P T G+ S+TGN R KL+ S + F
Sbjct: 306 AEVSIASLRPETVGSADSITGNFGTERPKLLGPPSTQLRFHF 347
>AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple
domains 2 protein.
Length = 3487
Score = 31.5 bits (68), Expect = 2.8
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = -3
Query: 246 LPTTAGTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFR 67
+P G + +L+ TEP I+ GPQ+ + + + SNQVLL F
Sbjct: 2214 VPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFH 2273
Query: 66 TYAPNGLIYILKASVFEAT 10
A G I+ + S + T
Sbjct: 2274 RDAATGGIFAIAFSAYPLT 2292
>AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein.
Length = 3631
Score = 31.5 bits (68), Expect = 2.8
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = -3
Query: 246 LPTTAGTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFR 67
+P G + +L+ TEP I+ GPQ+ + + + SNQVLL F
Sbjct: 2212 VPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFH 2271
Query: 66 TYAPNGLIYILKASVFEAT 10
A G I+ + S + T
Sbjct: 2272 RDAATGGIFAIAFSAYPLT 2290
>BC047881-1|AAH47881.1| 413|Homo sapiens family with sequence
similarity 8, member A1 protein.
Length = 413
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +3
Query: 144 RTCTLEGQTARRSIYPWVLWSYLSTMTWYQRLSATILQWRPSPDP 278
R L + R ++ W+ SY +TW+ L+A P P P
Sbjct: 104 RPARLSAREYSRQVHEWLWQSYCGYLTWHSGLAAFPAYCSPQPSP 148
>AL138824-5|CAI12251.1| 413|Homo sapiens family with sequence
similarity 8, member A1 protein.
Length = 413
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +3
Query: 144 RTCTLEGQTARRSIYPWVLWSYLSTMTWYQRLSATILQWRPSPDP 278
R L + R ++ W+ SY +TW+ L+A P P P
Sbjct: 104 RPARLSAREYSRQVHEWLWQSYCGYLTWHSGLAAFPAYCSPQPSP 148
>AF097027-1|AAF07850.1| 413|Homo sapiens autosomal highly conserved
protein protein.
Length = 413
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +3
Query: 144 RTCTLEGQTARRSIYPWVLWSYLSTMTWYQRLSATILQWRPSPDP 278
R L + R ++ W+ SY +TW+ L+A P P P
Sbjct: 104 RPARLSAREYSRQVHEWLWQSYCGYLTWHSGLAAFPAYCSPQPSP 148
>AF097026-1|AAF07849.1| 413|Homo sapiens autosomal highly conserved
protein protein.
Length = 413
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +3
Query: 144 RTCTLEGQTARRSIYPWVLWSYLSTMTWYQRLSATILQWRPSPDP 278
R L + R ++ W+ SY +TW+ L+A P P P
Sbjct: 104 RPARLSAREYSRQVHEWLWQSYCGYLTWHSGLAAFPAYCSPQPSP 148
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane helix
receptor protein.
Length = 346
Score = 30.7 bits (66), Expect = 5.0
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +1
Query: 388 LC*SVVSALHV*VCVFMMCACYEVSVSLCVI*CRLYLSACI 510
+C V + V +CV++ C C VSVSLCV C LS C+
Sbjct: 105 VCLCVYLHISVYLCVYV-CICVCVSVSLCVSVCAC-LSLCV 143
Score = 29.9 bits (64), Expect = 8.7
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +3
Query: 402 CECVTC--VSVCFYDVRVLRSECEFVCYIVPVIFKCVYHECVIKFIVCC 542
C+CV+C VSVC Y + V C VC + V CV F+ C
Sbjct: 5 CDCVSCVSVSVCLY-LYVCVCICVSVCVCICVSVCVCICVCVSVFVCVC 52
>AK097452-1|BAC05058.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ40133 fis, clone TESTI2012231. ).
Length = 225
Score = 30.3 bits (65), Expect = 6.6
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = -2
Query: 538 HTIN-FITHS*YTHLNITGTI*HTNSHSLRNTRTS*KHTLTHVTHSQHFNTISNISHYR 365
HTI+ TH+ +T +IT + +S ++ NT T HT T TH H ++I+ Y+
Sbjct: 2 HTIHTHTTHTIHTQ-HITYHSHNPHSPTIHNTHTHHSHTHTIWTHHTHTTHTTHINSYK 59
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,240,085
Number of Sequences: 237096
Number of extensions: 2868846
Number of successful extensions: 7030
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6984
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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