Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0355
(671 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 22 4.6
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 4.6
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 4.6
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 8.1
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 8.1
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 8.1
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 8.1
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 8.1
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 8.1
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 8.1
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 8.1
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 8.1
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = +2
Query: 170 CEEINLSLGSVELPVNDDLVPAVVGNHLAMETLAGSW 280
CE++ +SLG++++ + +P HL + + W
Sbjct: 22 CEKVYVSLGALKMHIRTHTLPCKC--HLCGKAFSRPW 56
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.2 bits (45), Expect = 4.6
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = +2
Query: 179 INLSLGSVELPVNDD----LVPAVVGNHLAMETLAGSWPGSELSPMSITTYGYP 328
+NL GS + N +VP V + + L S GSE S YG+P
Sbjct: 546 VNLKSGSNTIERNSHESVFVVPDEVPSDVLYNRLVVSEDGSETFKYSSQPYGFP 599
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.2 bits (45), Expect = 4.6
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = +2
Query: 179 INLSLGSVELPVNDD----LVPAVVGNHLAMETLAGSWPGSELSPMSITTYGYP 328
+NL GS + N +VP V + + L S GSE S YG+P
Sbjct: 546 VNLKSGSNTIERNSHESVFVVPDEVPSDVLYNRLVVSEDGSETFKYSSQPYGFP 599
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.4 bits (43), Expect = 8.1
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2
Query: 301 RGQLRTWPGSGEG 263
RGQLRT SGEG
Sbjct: 396 RGQLRTKIESGEG 408
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 599 LKS*YSYTFYQHTNDLYHITAYNKLY 522
L + Y+Y+ Y + N+ + Y KLY
Sbjct: 85 LSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 599 LKS*YSYTFYQHTNDLYHITAYNKLY 522
L + Y+Y+ Y + N+ + Y KLY
Sbjct: 85 LSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 599 LKS*YSYTFYQHTNDLYHITAYNKLY 522
L + Y+Y+ Y + N+ + Y KLY
Sbjct: 85 LSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 599 LKS*YSYTFYQHTNDLYHITAYNKLY 522
L + Y+Y+ Y + N+ + Y KLY
Sbjct: 85 LSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 599 LKS*YSYTFYQHTNDLYHITAYNKLY 522
L + Y+Y+ Y + N+ + Y KLY
Sbjct: 85 LSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 599 LKS*YSYTFYQHTNDLYHITAYNKLY 522
L + Y+Y+ Y + N+ + Y KLY
Sbjct: 85 LSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 599 LKS*YSYTFYQHTNDLYHITAYNKLY 522
L + Y+Y+ Y + N+ + Y KLY
Sbjct: 85 LSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 599 LKS*YSYTFYQHTNDLYHITAYNKLY 522
L + Y+Y+ Y + N+ + Y KLY
Sbjct: 85 LSNNYNYSNYNNYNNNNNYNNYKKLY 110
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,057
Number of Sequences: 438
Number of extensions: 5219
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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