Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0354
(719 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64799-1|AAA58647.1| 359|Homo sapiens histamine H2 receptor pro... 31 5.5
D49783-1|BAA08618.1| 359|Homo sapiens Human histamine H2 recept... 31 5.5
BC054510-1|AAH54510.1| 397|Homo sapiens HRH2 protein protein. 31 5.5
AY136744-1|AAN01270.1| 359|Homo sapiens histamine receptor H2 p... 31 5.5
AB041384-1|BAA94469.1| 359|Homo sapiens histamine H2 receptor p... 31 5.5
AB023486-1|BAA84279.1| 359|Homo sapiens histamine H2 receptor p... 31 5.5
BC122871-1|AAI22872.1| 205|Homo sapiens chromosome 6 open readi... 30 7.3
BC119778-1|AAI19779.1| 205|Homo sapiens chromosome 6 open readi... 30 7.3
AL354892-5|CAI19977.1| 205|Homo sapiens protein ( Human DNA seq... 30 7.3
AK056013-1|BAB71073.1| 205|Homo sapiens protein ( Homo sapiens ... 30 7.3
BC009973-1|AAH09973.1| 650|Homo sapiens dihydrouridine synthase... 30 9.6
BC008362-1|AAH08362.1| 613|Homo sapiens DUS3L protein protein. 30 9.6
AL365411-1|CAB96955.1| 465|Homo sapiens hypothetical protein, s... 30 9.6
AK023958-1|BAB14740.1| 650|Homo sapiens protein ( Homo sapiens ... 30 9.6
>M64799-1|AAA58647.1| 359|Homo sapiens histamine H2 receptor
protein.
Length = 359
Score = 30.7 bits (66), Expect = 5.5
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 21 RQISSMEPLLFPFFSSPVDGSIKLIRPSVIMRTSSTLSRAL-LNHPTDISSGTSITTVCR 197
R + M+PL +P +PV +I L+ VI T S LS L N + S G T+ C+
Sbjct: 116 RYCAVMDPLRYPVLVTPVRVAISLVLIWVISITLSFLSIHLGWNSRNETSKGNHTTSKCK 175
>D49783-1|BAA08618.1| 359|Homo sapiens Human histamine H2 receptor
protein.
Length = 359
Score = 30.7 bits (66), Expect = 5.5
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 21 RQISSMEPLLFPFFSSPVDGSIKLIRPSVIMRTSSTLSRAL-LNHPTDISSGTSITTVCR 197
R + M+PL +P +PV +I L+ VI T S LS L N + S G T+ C+
Sbjct: 116 RYCAVMDPLRYPVLVTPVRVAISLVLIWVISITLSFLSIHLGWNSRNETSKGNHTTSKCK 175
>BC054510-1|AAH54510.1| 397|Homo sapiens HRH2 protein protein.
Length = 397
Score = 30.7 bits (66), Expect = 5.5
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 21 RQISSMEPLLFPFFSSPVDGSIKLIRPSVIMRTSSTLSRAL-LNHPTDISSGTSITTVCR 197
R + M+PL +P +PV +I L+ VI T S LS L N + S G T+ C+
Sbjct: 116 RYCAVMDPLRYPVLVTPVRVAISLVLIWVISITLSFLSIHLGWNSRNETSKGNHTTSKCK 175
>AY136744-1|AAN01270.1| 359|Homo sapiens histamine receptor H2
protein.
Length = 359
Score = 30.7 bits (66), Expect = 5.5
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 21 RQISSMEPLLFPFFSSPVDGSIKLIRPSVIMRTSSTLSRAL-LNHPTDISSGTSITTVCR 197
R + M+PL +P +PV +I L+ VI T S LS L N + S G T+ C+
Sbjct: 116 RYCAVMDPLRYPVLVTPVRVAISLVLIWVISITLSFLSIHLGWNSRNETSKGNHTTSKCK 175
>AB041384-1|BAA94469.1| 359|Homo sapiens histamine H2 receptor
protein.
Length = 359
Score = 30.7 bits (66), Expect = 5.5
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 21 RQISSMEPLLFPFFSSPVDGSIKLIRPSVIMRTSSTLSRAL-LNHPTDISSGTSITTVCR 197
R + M+PL +P +PV +I L+ VI T S LS L N + S G T+ C+
Sbjct: 116 RYCAVMDPLRYPVLVTPVRVAISLVLIWVISITLSFLSIHLGWNSRNETSKGNHTTSKCK 175
>AB023486-1|BAA84279.1| 359|Homo sapiens histamine H2 receptor
protein.
Length = 359
Score = 30.7 bits (66), Expect = 5.5
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 21 RQISSMEPLLFPFFSSPVDGSIKLIRPSVIMRTSSTLSRAL-LNHPTDISSGTSITTVCR 197
R + M+PL +P +PV +I L+ VI T S LS L N + S G T+ C+
Sbjct: 116 RYCAVMDPLRYPVLVTPVRVAISLVLIWVISITLSFLSIHLGWNSRNETSKGNHTTSKCK 175
>BC122871-1|AAI22872.1| 205|Homo sapiens chromosome 6 open reading
frame 122 protein.
Length = 205
Score = 30.3 bits (65), Expect = 7.3
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = -2
Query: 682 PAQVNCNTTHY---RANWGT-GAPPSSPAAIVKGSLSAKAVRVSPMRFVRPVSTLPGPTS 515
P Q C H + + GT A P +P +I K S SAK+++ PVS L T
Sbjct: 120 PRQRKCRRQHSTGRKPHCGTRSAAPRNPKSIHKRSFSAKSLKNKTRNESPPVSALVSRTK 179
Query: 514 *RVLRLALPCTQQTSSTEP 458
+ +L C Q +SS P
Sbjct: 180 TQPGQLHF-CCQPSSSQAP 197
>BC119778-1|AAI19779.1| 205|Homo sapiens chromosome 6 open reading
frame 122 protein.
Length = 205
Score = 30.3 bits (65), Expect = 7.3
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = -2
Query: 682 PAQVNCNTTHY---RANWGT-GAPPSSPAAIVKGSLSAKAVRVSPMRFVRPVSTLPGPTS 515
P Q C H + + GT A P +P +I K S SAK+++ PVS L T
Sbjct: 120 PRQRKCRRQHSTGRKPHCGTRSAAPRNPKSIHKRSFSAKSLKNKTRNESPPVSALVSRTK 179
Query: 514 *RVLRLALPCTQQTSSTEP 458
+ +L C Q +SS P
Sbjct: 180 TQPGQLHF-CCQPSSSQAP 197
>AL354892-5|CAI19977.1| 205|Homo sapiens protein ( Human DNA
sequence from clone RP1-266L20 on chromosome 6 Contains
two novel genes, the TCTE3 gene for
t-complex-associated-testis-expressed
3,t-complex-associated-testis-expressed 3).
Length = 205
Score = 30.3 bits (65), Expect = 7.3
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = -2
Query: 682 PAQVNCNTTHY---RANWGT-GAPPSSPAAIVKGSLSAKAVRVSPMRFVRPVSTLPGPTS 515
P Q C H + + GT A P +P +I K S SAK+++ PVS L T
Sbjct: 120 PRQRKCRRQHSTGRKPHCGTRSAAPRNPKSIHKRSFSAKSLKNKTRNESPPVSALVSRTK 179
Query: 514 *RVLRLALPCTQQTSSTEP 458
+ +L C Q +SS P
Sbjct: 180 TQPGQLHF-CCQPSSSQAP 197
>AK056013-1|BAB71073.1| 205|Homo sapiens protein ( Homo sapiens
cDNA FLJ31451 fis, clone NT2NE2000980. ).
Length = 205
Score = 30.3 bits (65), Expect = 7.3
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = -2
Query: 682 PAQVNCNTTHY---RANWGT-GAPPSSPAAIVKGSLSAKAVRVSPMRFVRPVSTLPGPTS 515
P Q C H + + GT A P +P +I K S SAK+++ PVS L T
Sbjct: 120 PRQRKCRRQHSTGRKPHCGTRSAAPRNPKSIHKRSFSAKSLKNKTRNESPPVSALVSRTK 179
Query: 514 *RVLRLALPCTQQTSSTEP 458
+ +L C Q +SS P
Sbjct: 180 TQPGQLHF-CCQPSSSQAP 197
>BC009973-1|AAH09973.1| 650|Homo sapiens dihydrouridine synthase
3-like (S. cerevisiae) protein.
Length = 650
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 682 PAQVNCNTTHYRANWGTGAPPSSPAAIVKGSLSAKAVRVSP 560
P Q NC A GT PPSSP VR+ P
Sbjct: 255 PRQENCGAQQVPAGPGTSTPPSSPVRTCGPLTDEDVVRLRP 295
>BC008362-1|AAH08362.1| 613|Homo sapiens DUS3L protein protein.
Length = 613
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 682 PAQVNCNTTHYRANWGTGAPPSSPAAIVKGSLSAKAVRVSP 560
P Q NC A GT PPSSP VR+ P
Sbjct: 218 PRQENCGAQQVPAGPGTSTPPSSPVRTCGPLTDEDVVRLRP 258
>AL365411-1|CAB96955.1| 465|Homo sapiens hypothetical protein,
similar to (AF091072.1) predicted protein [Homo sapiens]
protein.
Length = 465
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 682 PAQVNCNTTHYRANWGTGAPPSSPAAIVKGSLSAKAVRVSP 560
P Q NC A GT PPSSP VR+ P
Sbjct: 238 PRQENCGAQQVPAGPGTSTPPSSPVRTCGPLTDEDVVRLRP 278
>AK023958-1|BAB14740.1| 650|Homo sapiens protein ( Homo sapiens
cDNA FLJ13896 fis, clone THYRO1001703, weakly similar to
NIFR3-LIKE PROTEIN. ).
Length = 650
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 682 PAQVNCNTTHYRANWGTGAPPSSPAAIVKGSLSAKAVRVSP 560
P Q NC A GT PPSSP VR+ P
Sbjct: 255 PRQENCGAQQVPAGPGTSTPPSSPVRTCGPLTDEDVVRLRP 295
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,019,491
Number of Sequences: 237096
Number of extensions: 2865166
Number of successful extensions: 6419
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6419
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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