Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0354
         (719 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   2.2  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.9  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   3.8  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   8.9  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 86   YRTIDRAGEEGKQQRLHAADLATVHQSS 3
            + T+D + E+GK+  L   +L T  Q S
Sbjct: 1027 FETVDFSKEDGKEHHLQIMNLKTYTQYS 1054


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 357 SAASDKNALCAHWLTEADDALNSEWISHGAIWNNHRTA 244
           S ASD   L   W+    +   + W+S     +NHR A
Sbjct: 324 STASDFKQLIDRWVANVPNGSVTNWVSGN--HDNHRVA 359


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 303 DALNSEWISHGAIWNNHRTAISGRGWKK 220
           D L+SEW S     +N +      GW+K
Sbjct: 194 DDLSSEWDSDYTDKSNEKKIPKSSGWRK 221


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 282 STQNLARRQPQLASERTEHFCR*LPNPARIQTQ 380
           S   +   +PQ++ +RT      L NPA IQ+Q
Sbjct: 405 SQSTIQTLRPQVSPDRTSPMEYRLYNPALIQSQ 437


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 397 KPKRRLPAVL 426
           KPKRRLP +L
Sbjct: 402 KPKRRLPHIL 411


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,247
Number of Sequences: 438
Number of extensions: 4878
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)