Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0352
         (537 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55DC9 Cluster: PREDICTED: similar to CG16786-PA...    48   1e-04
UniRef50_Q7JRF0 Cluster: RE48511p; n=2; Sophophora|Rep: RE48511p...    44   0.003
UniRef50_UPI00015B5E60 Cluster: PREDICTED: similar to conserved ...    43   0.005
UniRef50_Q5TSF6 Cluster: ENSANGP00000028963; n=2; Culicidae|Rep:...    40   0.027
UniRef50_A6CGV0 Cluster: Sensor protein; n=1; Planctomyces maris...    33   5.5  
UniRef50_Q4QD23 Cluster: Putative uncharacterized protein; n=2; ...    32   7.3  
UniRef50_Q0VGC1 Cluster: KIAA0895 protein; n=26; Euteleostomi|Re...    32   7.3  
UniRef50_O94969 Cluster: KIAA0895 protein; n=10; Tetrapoda|Rep: ...    32   7.3  
UniRef50_UPI0000F21D11 Cluster: PREDICTED: hypothetical protein,...    32   9.6  

>UniRef50_UPI0000D55DC9 Cluster: PREDICTED: similar to CG16786-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG16786-PA, isoform A - Tribolium castaneum
          Length = 988

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +1

Query: 346 MTPVRAQGNLLTQTVYGFLDFTTTIGNT 429
           + P   QGN +TQTVYGFLDFTTTIGNT
Sbjct: 85  LPPAVNQGNYVTQTVYGFLDFTTTIGNT 112


>UniRef50_Q7JRF0 Cluster: RE48511p; n=2; Sophophora|Rep: RE48511p -
           Drosophila melanogaster (Fruit fly)
          Length = 779

 Score = 43.6 bits (98), Expect = 0.003
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = +1

Query: 373 LLTQTVYGFLDFTTTIGNT 429
           LLTQTVYGFLDFTTTIGNT
Sbjct: 21  LLTQTVYGFLDFTTTIGNT 39


>UniRef50_UPI00015B5E60 Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 987

 Score = 42.7 bits (96), Expect = 0.005
 Identities = 22/39 (56%), Positives = 23/39 (58%)
 Frame = +1

Query: 313 ALLAVAAHLSCMTPVRAQGNLLTQTVYGFLDFTTTIGNT 429
           A  A A     + P  A     TQTVYGFLDFTTTIGNT
Sbjct: 36  AAAAAANAEEVVLPAPAGPEFTTQTVYGFLDFTTTIGNT 74


>UniRef50_Q5TSF6 Cluster: ENSANGP00000028963; n=2; Culicidae|Rep:
           ENSANGP00000028963 - Anopheles gambiae str. PEST
          Length = 773

 Score = 40.3 bits (90), Expect = 0.027
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = +1

Query: 379 TQTVYGFLDFTTTIGNT 429
           TQTVYGFLDFTTTIGNT
Sbjct: 1   TQTVYGFLDFTTTIGNT 17


>UniRef50_A6CGV0 Cluster: Sensor protein; n=1; Planctomyces maris
           DSM 8797|Rep: Sensor protein - Planctomyces maris DSM
           8797
          Length = 520

 Score = 32.7 bits (71), Expect = 5.5
 Identities = 12/50 (24%), Positives = 27/50 (54%)
 Frame = +2

Query: 353 QYEHKEISSLRLSMDSWTSRQPLAIPVMVFFAPVKRLRQNRPRLKSQFKK 502
           Q  H  ++  + S+D+   R  L + V+    P++R+R ++P   + F++
Sbjct: 34  QSYHNTVNEFKYSLDNLPDRDRLVVSVVALNKPLQRIRHSKPAASAHFQQ 83


>UniRef50_Q4QD23 Cluster: Putative uncharacterized protein; n=2;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 417

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +3

Query: 309 NCSFGGGRPFKLYDTSTSTRKSPHSDCLWILGLHDNHWQY 428
           N    GGR + L  T T+ R++P    LW L LH N W +
Sbjct: 151 NAHVVGGRMYVLMGTPTAPREAP----LWYLDLHTNAWHH 186


>UniRef50_Q0VGC1 Cluster: KIAA0895 protein; n=26; Euteleostomi|Rep:
           KIAA0895 protein - Homo sapiens (Human)
          Length = 304

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = +1

Query: 232 NATASKACLF*NSANKNNRATMDRRLIALLAVAAHLSCMTPVRAQGNLLTQTVYGFLDFT 411
           ++T SK C   + +   +R+   RR+ AL+ V +  +     R     +T +V   + FT
Sbjct: 114 SSTYSKRCRKPSKSPNTSRSKDPRRMKALVPVTSSGTWYCLERRPAVFVTSSVSSPVKFT 173

Query: 412 TTIGNTGNGVLRP 450
             I  TGNG++ P
Sbjct: 174 HDISVTGNGIVLP 186


>UniRef50_O94969 Cluster: KIAA0895 protein; n=10; Tetrapoda|Rep:
           KIAA0895 protein - Homo sapiens (Human)
          Length = 540

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = +1

Query: 232 NATASKACLF*NSANKNNRATMDRRLIALLAVAAHLSCMTPVRAQGNLLTQTVYGFLDFT 411
           ++T SK C   + +   +R+   RR+ AL+ V +  +     R     +T +V   + FT
Sbjct: 147 SSTYSKRCRKPSKSPNTSRSKDPRRMKALVPVTSSGTWYCLERRPAVFVTSSVSSPVKFT 206

Query: 412 TTIGNTGNGVLRP 450
             I  TGNG++ P
Sbjct: 207 HDISVTGNGIVLP 219


>UniRef50_UPI0000F21D11 Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Danio rerio|Rep: PREDICTED: hypothetical
           protein, partial - Danio rerio
          Length = 292

 Score = 31.9 bits (69), Expect = 9.6
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +1

Query: 292 TMDRRLIALLAVAAHLSC--MTPVRAQGNLLTQTVYGFLDFTTTIGNTGNGVL 444
           +  R +I LL V   LS   + PV   GNLL    Y F   T    N+GN +L
Sbjct: 17  SFQRHIIGLLVVVGVLSVGIVLPVNFSGNLLENNAYSFGRTTIANLNSGNNLL 69


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,196,449
Number of Sequences: 1657284
Number of extensions: 10584381
Number of successful extensions: 24840
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 24285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24836
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34156095254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)