Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0352
         (537 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   3.0  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   3.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   5.2  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   6.9  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   6.9  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.1  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   9.1  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 275 FALFQNRHAFDAVAFCAITALS 210
           F L   RH  DA  FC  +++S
Sbjct: 475 FPLLSQRHQIDAKMFCNESSVS 496


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +3

Query: 141 AVFIEIHFQEKRRFPVIL 194
           A+FI  +FQ++R  P+I+
Sbjct: 135 AMFIVPYFQDRREMPLIV 152


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +2

Query: 230 KMRQHQKRVYSETARIKTTEPLW 298
           K ++  K  Y+E   +  T+P+W
Sbjct: 264 KKKKTIKEKYTEDEELNKTKPIW 286


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 14/59 (23%), Positives = 24/59 (40%)
 Frame = -2

Query: 320 KRAISRRSIVALLFLFALFQNRHAFDAVAFCAITALSGFGPQ*NNRKSSFFLKMYLYEN 144
           K  +S   IVA L  +   Q+  + +         + G  P  NNR     L++ + E+
Sbjct: 171 KPEMSDSEIVAKLVAYTSAQSHSSVERAGLLGGVKMRGLQPDDNNRLRGETLEVAIKED 229


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 147 KQLYHQEAPTDQKIYS 100
           ++L+HQ+ P    IYS
Sbjct: 30  EELFHQKCPKPAPIYS 45


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 531 MAVKVSFHDIFL 496
           M V  +FHDIFL
Sbjct: 270 MVVPQNFHDIFL 281


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 531 MAVKVSFHDIFL 496
           M V  +FHDIFL
Sbjct: 95  MVVPQNFHDIFL 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,365
Number of Sequences: 336
Number of extensions: 2737
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)