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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0347
         (666 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          35   8e-04
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          35   8e-04
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          35   8e-04
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          35   8e-04
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          35   8e-04
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          35   8e-04
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          35   8e-04
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    35   8e-04
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    25   0.65 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               24   1.1  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    23   2.0  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    23   2.0  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   3.5  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   6.0  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    22   6.0  

>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 34.7 bits (76), Expect = 8e-04
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = -2

Query: 491 KAIIEMERLIESLEKEREISTNNNTELTKKIEKLENQIKTAEKSSTKTN 345
           K I E E +   L K  EI T + T L   IEK EN+ KT +K +  +N
Sbjct: 168 KPIFEREEIKNILNKTNEI-TEHRTVLAVNIEKSENETKTCKKYAISSN 215


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 34.7 bits (76), Expect = 8e-04
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = -2

Query: 491 KAIIEMERLIESLEKEREISTNNNTELTKKIEKLENQIKTAEKSSTKTN 345
           K I E E +   L K  EI T + T L   IEK EN+ KT +K +  +N
Sbjct: 168 KPIFEREEIKNILNKTNEI-TEHRTVLAVNIEKSENETKTCKKYAISSN 215


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 34.7 bits (76), Expect = 8e-04
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = -2

Query: 491 KAIIEMERLIESLEKEREISTNNNTELTKKIEKLENQIKTAEKSSTKTN 345
           K I E E +   L K  EI T + T L   IEK EN+ KT +K +  +N
Sbjct: 168 KPIFEREEIKNILNKTNEI-TEHRTVLAVNIEKSENETKTCKKYAISSN 215


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 34.7 bits (76), Expect = 8e-04
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = -2

Query: 491 KAIIEMERLIESLEKEREISTNNNTELTKKIEKLENQIKTAEKSSTKTN 345
           K I E E +   L K  EI T + T L   IEK EN+ KT +K +  +N
Sbjct: 168 KPIFEREEIKNILNKTNEI-TEHRTVLAVNIEKSENETKTCKKYAISSN 215


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 34.7 bits (76), Expect = 8e-04
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = -2

Query: 491 KAIIEMERLIESLEKEREISTNNNTELTKKIEKLENQIKTAEKSSTKTN 345
           K I E E +   L K  EI T + T L   IEK EN+ KT +K +  +N
Sbjct: 168 KPIFEREEIKNILNKTNEI-TEHRTVLAVNIEKSENETKTCKKYAISSN 215


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 34.7 bits (76), Expect = 8e-04
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = -2

Query: 491 KAIIEMERLIESLEKEREISTNNNTELTKKIEKLENQIKTAEKSSTKTN 345
           K I E E +   L K  EI T + T L   IEK EN+ KT +K +  +N
Sbjct: 168 KPIFEREEIKNILNKTNEI-TEHRTVLAVNIEKSENETKTCKKYAISSN 215


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 34.7 bits (76), Expect = 8e-04
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = -2

Query: 491 KAIIEMERLIESLEKEREISTNNNTELTKKIEKLENQIKTAEKSSTKTN 345
           K I E E +   L K  EI T + T L   IEK EN+ KT +K +  +N
Sbjct: 168 KPIFEREEIKNILNKTNEI-TEHRTVLAVNIEKSENETKTCKKYAISSN 215


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 34.7 bits (76), Expect = 8e-04
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = -2

Query: 491 KAIIEMERLIESLEKEREISTNNNTELTKKIEKLENQIKTAEKSSTKTN 345
           K I E E +   L K  EI T + T L   IEK EN+ KT +K +  +N
Sbjct: 168 KPIFEREEIKNILNKTNEI-TEHRTVLAVNIEKSENETKTCKKYAISSN 215


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 22/68 (32%), Positives = 36/68 (52%)
 Frame = -2

Query: 548 NERNKSSFKRTR*TISKLQKAIIEMERLIESLEKEREISTNNNTELTKKIEKLENQIKTA 369
           N  +  SFK    T S L +   +ME+L+    K RE    ++ + + K++  +++IKT 
Sbjct: 627 NTTSMESFKPPTLTESLLNRHNEDMEKLMML--KHREF--RSSIKASDKLK--DSRIKTT 680

Query: 368 EKSSTKTN 345
           EK ST  N
Sbjct: 681 EKLSTDPN 688


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 16/60 (26%), Positives = 33/60 (55%)
 Frame = -2

Query: 464 IESLEKEREISTNNNTELTKKIEKLENQIKTAEKSSTKTNEFTDTLTAERDSAIKMLEEK 285
           + +LE E++  +    + ++ I+ LEN +   ++   +TN+ T   TA+   A K L++K
Sbjct: 348 VVALEAEKKNLSKVIDQHSQLIDTLENVLAIVDRLMDETNQLTLQETAD---AFKDLQDK 404


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -2

Query: 407 KKIEKLENQIKTAEKSSTKTNEFTDTLTAERDSAI 303
           + IEK E + +   K S K     D L AER+  I
Sbjct: 37  RTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGI 71


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -2

Query: 407 KKIEKLENQIKTAEKSSTKTNEFTDTLTAERDSAI 303
           + IEK E + +   K S K     D L AER+  I
Sbjct: 37  RTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGI 71


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -3

Query: 658 KDSRIKIKEYDSLFAEYEEAKSKLQSYKTENTELLNEMKEINQVLKERGELYQNCKKPL 482
           K SRI I+    ++ +  + +    S K E   LLN +   +  +KE  E  +  K+ L
Sbjct: 492 KSSRINIERMKQVYQQLNKYRGNGVSLKGETVGLLNALPPSS--MKETEEEKKKTKQSL 548


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 586 QSYKTENTELLNEMKEINQVLKERGELYQN 497
           Q Y+  + E   ++KE  Q+ +  G + QN
Sbjct: 667 QQYQVVSVEQYQQLKEQGQISQVGGGIQQN 696


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -3

Query: 616 AEYEEAKSKLQSYKTENTELLNEMKEINQVLKE 518
           AEY     K+Q  K      + +++E+++ LK+
Sbjct: 257 AEYRRNFKKMQEEKIFEPHRIPQLQEVSEFLKK 289


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,921
Number of Sequences: 438
Number of extensions: 1888
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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