Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0347
(666 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 35 8e-04
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 35 8e-04
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 35 8e-04
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 35 8e-04
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 35 8e-04
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 35 8e-04
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 35 8e-04
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 35 8e-04
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 25 0.65
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 24 1.1
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 23 2.0
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 23 2.0
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 3.5
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 6.0
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 22 6.0
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 34.7 bits (76), Expect = 8e-04
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = -2
Query: 491 KAIIEMERLIESLEKEREISTNNNTELTKKIEKLENQIKTAEKSSTKTN 345
K I E E + L K EI T + T L IEK EN+ KT +K + +N
Sbjct: 168 KPIFEREEIKNILNKTNEI-TEHRTVLAVNIEKSENETKTCKKYAISSN 215
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 34.7 bits (76), Expect = 8e-04
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = -2
Query: 491 KAIIEMERLIESLEKEREISTNNNTELTKKIEKLENQIKTAEKSSTKTN 345
K I E E + L K EI T + T L IEK EN+ KT +K + +N
Sbjct: 168 KPIFEREEIKNILNKTNEI-TEHRTVLAVNIEKSENETKTCKKYAISSN 215
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 34.7 bits (76), Expect = 8e-04
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = -2
Query: 491 KAIIEMERLIESLEKEREISTNNNTELTKKIEKLENQIKTAEKSSTKTN 345
K I E E + L K EI T + T L IEK EN+ KT +K + +N
Sbjct: 168 KPIFEREEIKNILNKTNEI-TEHRTVLAVNIEKSENETKTCKKYAISSN 215
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 34.7 bits (76), Expect = 8e-04
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = -2
Query: 491 KAIIEMERLIESLEKEREISTNNNTELTKKIEKLENQIKTAEKSSTKTN 345
K I E E + L K EI T + T L IEK EN+ KT +K + +N
Sbjct: 168 KPIFEREEIKNILNKTNEI-TEHRTVLAVNIEKSENETKTCKKYAISSN 215
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 34.7 bits (76), Expect = 8e-04
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = -2
Query: 491 KAIIEMERLIESLEKEREISTNNNTELTKKIEKLENQIKTAEKSSTKTN 345
K I E E + L K EI T + T L IEK EN+ KT +K + +N
Sbjct: 168 KPIFEREEIKNILNKTNEI-TEHRTVLAVNIEKSENETKTCKKYAISSN 215
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 34.7 bits (76), Expect = 8e-04
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = -2
Query: 491 KAIIEMERLIESLEKEREISTNNNTELTKKIEKLENQIKTAEKSSTKTN 345
K I E E + L K EI T + T L IEK EN+ KT +K + +N
Sbjct: 168 KPIFEREEIKNILNKTNEI-TEHRTVLAVNIEKSENETKTCKKYAISSN 215
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 34.7 bits (76), Expect = 8e-04
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = -2
Query: 491 KAIIEMERLIESLEKEREISTNNNTELTKKIEKLENQIKTAEKSSTKTN 345
K I E E + L K EI T + T L IEK EN+ KT +K + +N
Sbjct: 168 KPIFEREEIKNILNKTNEI-TEHRTVLAVNIEKSENETKTCKKYAISSN 215
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 34.7 bits (76), Expect = 8e-04
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = -2
Query: 491 KAIIEMERLIESLEKEREISTNNNTELTKKIEKLENQIKTAEKSSTKTN 345
K I E E + L K EI T + T L IEK EN+ KT +K + +N
Sbjct: 168 KPIFEREEIKNILNKTNEI-TEHRTVLAVNIEKSENETKTCKKYAISSN 215
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 25.0 bits (52), Expect = 0.65
Identities = 22/68 (32%), Positives = 36/68 (52%)
Frame = -2
Query: 548 NERNKSSFKRTR*TISKLQKAIIEMERLIESLEKEREISTNNNTELTKKIEKLENQIKTA 369
N + SFK T S L + +ME+L+ K RE ++ + + K++ +++IKT
Sbjct: 627 NTTSMESFKPPTLTESLLNRHNEDMEKLMML--KHREF--RSSIKASDKLK--DSRIKTT 680
Query: 368 EKSSTKTN 345
EK ST N
Sbjct: 681 EKLSTDPN 688
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 24.2 bits (50), Expect = 1.1
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = -2
Query: 464 IESLEKEREISTNNNTELTKKIEKLENQIKTAEKSSTKTNEFTDTLTAERDSAIKMLEEK 285
+ +LE E++ + + ++ I+ LEN + ++ +TN+ T TA+ A K L++K
Sbjct: 348 VVALEAEKKNLSKVIDQHSQLIDTLENVLAIVDRLMDETNQLTLQETAD---AFKDLQDK 404
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 407 KKIEKLENQIKTAEKSSTKTNEFTDTLTAERDSAI 303
+ IEK E + + K S K D L AER+ I
Sbjct: 37 RTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGI 71
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 407 KKIEKLENQIKTAEKSSTKTNEFTDTLTAERDSAI 303
+ IEK E + + K S K D L AER+ I
Sbjct: 37 RTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGI 71
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.6 bits (46), Expect = 3.5
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = -3
Query: 658 KDSRIKIKEYDSLFAEYEEAKSKLQSYKTENTELLNEMKEINQVLKERGELYQNCKKPL 482
K SRI I+ ++ + + + S K E LLN + + +KE E + K+ L
Sbjct: 492 KSSRINIERMKQVYQQLNKYRGNGVSLKGETVGLLNALPPSS--MKETEEEKKKTKQSL 548
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 586 QSYKTENTELLNEMKEINQVLKERGELYQN 497
Q Y+ + E ++KE Q+ + G + QN
Sbjct: 667 QQYQVVSVEQYQQLKEQGQISQVGGGIQQN 696
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -3
Query: 616 AEYEEAKSKLQSYKTENTELLNEMKEINQVLKE 518
AEY K+Q K + +++E+++ LK+
Sbjct: 257 AEYRRNFKKMQEEKIFEPHRIPQLQEVSEFLKK 289
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,921
Number of Sequences: 438
Number of extensions: 1888
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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