Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0344
         (673 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   3.5  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          22   4.6  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   8.1  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   8.1  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 358  LRVAPEEHPVLLTEAPLNPKANREKM 435
            LR+ P  H V+ T   +NP  + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 565 RAHLRRIPHSPH 600
           RAHL+R+ H P+
Sbjct: 507 RAHLKRLDHQPY 518


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = +3

Query: 519 TTGIRAGLRRRCLPHPCPSTKDTALPPRHPASGLNRSRPYRLPHEN 656
           + GI  G     +  P P+ K   LPP HP + +    P  L  EN
Sbjct: 81  SNGIHTGFGGSIITIP-PTRK---LPPLHPHTAMVTHLPQTLTSEN 122


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 534 HEYRWYDRTVQR 499
           HE+ W+ ++VQR
Sbjct: 127 HEHPWFKKSVQR 138


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 122 GMCKAGFAGD 151
           GMCK G +GD
Sbjct: 130 GMCKEGISGD 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,837
Number of Sequences: 438
Number of extensions: 5357
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)