Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0341
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      32   0.004
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      32   0.004
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    25   0.40 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    25   0.40 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   3.8  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   3.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   3.8  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   5.0  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 32.3 bits (70), Expect = 0.004
 Identities = 23/59 (38%), Positives = 34/59 (57%)
 Frame = +3

Query: 129 PLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPPSISRQLSLHHKSTWSCRKEKVT 305
           PL+LT   I+K+PI  VAP+   E  ++ +HE DLP  +S +LS ++       K K T
Sbjct: 265 PLNLT---IKKMPIAIVAPFTIVE-PKLNKHE-DLPQDLSMKLSKNNDQCLDLSKTKET 318


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 32.3 bits (70), Expect = 0.004
 Identities = 23/59 (38%), Positives = 34/59 (57%)
 Frame = +3

Query: 129 PLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPPSISRQLSLHHKSTWSCRKEKVT 305
           PL+LT   I+K+PI  VAP+   E  ++ +HE DLP  +S +LS ++       K K T
Sbjct: 157 PLNLT---IKKMPIAIVAPFTIVE-PKLNKHE-DLPQDLSMKLSKNNDQCLDLSKTKET 210


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 194 TVVWCHKLNRQFFNV*LSQVKRRLF 120
           T+ WC+KL  QF  V  S+V+  LF
Sbjct: 308 TISWCYKLQEQF--VTNSEVRTELF 330


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 194 TVVWCHKLNRQFFNV*LSQVKRRLF 120
           T+ WC+KL  QF  V  S+V+  LF
Sbjct: 308 TISWCYKLQEQF--VTNSEVRTELF 330


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/52 (23%), Positives = 23/52 (44%)
 Frame = +3

Query: 105 STTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPPSISRQLS 260
           +T P K    +    +IE++ +  V  +HS  +H      +  P  ++  LS
Sbjct: 44  ATAPQKPDKWEDVMADIERVIMPGVTHWHSPRFHAYFPTANSYPAIVADILS 95


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 626 FQWVSNKHLFLFFIF 582
           F+W+S+  ++ +FIF
Sbjct: 78  FRWLSSTSIYAYFIF 92


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 626 FQWVSNKHLFLFFIF 582
           F+W+S+  ++ +FIF
Sbjct: 78  FRWLSSTSIYAYFIF 92


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 545 FENVTGTLVTCSTLVT*FDYAYDT 474
           F+N    L T S  +T F Y YD+
Sbjct: 234 FQNFLFVLSTFSICITQFYYCYDS 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,465
Number of Sequences: 336
Number of extensions: 2773
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)