Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0341
         (639 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060444-1|AAL25483.1|  162|Drosophila melanogaster LD47606p pro...    50   2e-06
AE014296-1228|AAF50580.1|  162|Drosophila melanogaster CG8600-PA...    50   2e-06

>AY060444-1|AAL25483.1|  162|Drosophila melanogaster LD47606p
           protein.
          Length = 162

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 81  NRWIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEY-HEVLRHESDLPP 239
           NRW+VSIWS TPH QPPLD TEL       +F    H   +  +V+    DL P
Sbjct: 66  NRWLVSIWSATPHNQPPLDFTELKDASYFQRFHPTTHQQVFPDDVVIGVDDLEP 119


>AE014296-1228|AAF50580.1|  162|Drosophila melanogaster CG8600-PA
           protein.
          Length = 162

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 81  NRWIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEY-HEVLRHESDLPP 239
           NRW+VSIWS TPH QPPLD TEL       +F    H   +  +V+    DL P
Sbjct: 66  NRWLVSIWSATPHNQPPLDFTELKDASYFQRFHPTTHQQVFPDDVVIGVDDLEP 119


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,783,334
Number of Sequences: 53049
Number of extensions: 460853
Number of successful extensions: 1122
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)