Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0341
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81581-14|CAH10785.1|  628|Caenorhabditis elegans Hypothetical p...    29   2.1  
Z81581-12|CAB70244.3|  635|Caenorhabditis elegans Hypothetical p...    29   2.1  
Z81581-2|CAD56595.1|  672|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z81581-1|CAD56594.1|  655|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z75534-3|CAH04714.1|  628|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z75534-2|CAA99825.4|  635|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z82280-6|CAB05267.2|  460|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z46934-6|CAA87045.3|  371|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z81581-14|CAH10785.1|  628|Caenorhabditis elegans Hypothetical
           protein F08A10.1d protein.
          Length = 628

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = +3

Query: 87  WIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPPSISRQLSLH 266
           W+V++ S     Q  L+L    +  LPI+F+AP+ +D +H+   +  ++  SI     L+
Sbjct: 289 WMVAL-SFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHDKTLYAVNVFLSIMMFFRLY 347

Query: 267 HKSTWSCR 290
               W CR
Sbjct: 348 ----WLCR 351


>Z81581-12|CAB70244.3|  635|Caenorhabditis elegans Hypothetical
           protein F08A10.1a protein.
          Length = 635

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = +3

Query: 87  WIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPPSISRQLSLH 266
           W+V++ S     Q  L+L    +  LPI+F+AP+ +D +H+   +  ++  SI     L+
Sbjct: 296 WMVAL-SFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHDKTLYAVNVFLSIMMFFRLY 354

Query: 267 HKSTWSCR 290
               W CR
Sbjct: 355 ----WLCR 358


>Z81581-2|CAD56595.1|  672|Caenorhabditis elegans Hypothetical
           protein F08A10.1c protein.
          Length = 672

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = +3

Query: 87  WIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPPSISRQLSLH 266
           W+V++ S     Q  L+L    +  LPI+F+AP+ +D +H+   +  ++  SI     L+
Sbjct: 316 WMVAL-SFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHDKTLYAVNVFLSIMMFFRLY 374

Query: 267 HKSTWSCR 290
               W CR
Sbjct: 375 ----WLCR 378


>Z81581-1|CAD56594.1|  655|Caenorhabditis elegans Hypothetical
           protein F08A10.1b protein.
          Length = 655

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = +3

Query: 87  WIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPPSISRQLSLH 266
           W+V++ S     Q  L+L    +  LPI+F+AP+ +D +H+   +  ++  SI     L+
Sbjct: 316 WMVAL-SFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHDKTLYAVNVFLSIMMFFRLY 374

Query: 267 HKSTWSCR 290
               W CR
Sbjct: 375 ----WLCR 378


>Z75534-3|CAH04714.1|  628|Caenorhabditis elegans Hypothetical
           protein F08A10.1d protein.
          Length = 628

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = +3

Query: 87  WIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPPSISRQLSLH 266
           W+V++ S     Q  L+L    +  LPI+F+AP+ +D +H+   +  ++  SI     L+
Sbjct: 289 WMVAL-SFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHDKTLYAVNVFLSIMMFFRLY 347

Query: 267 HKSTWSCR 290
               W CR
Sbjct: 348 ----WLCR 351


>Z75534-2|CAA99825.4|  635|Caenorhabditis elegans Hypothetical
           protein F08A10.1a protein.
          Length = 635

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = +3

Query: 87  WIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPPSISRQLSLH 266
           W+V++ S     Q  L+L    +  LPI+F+AP+ +D +H+   +  ++  SI     L+
Sbjct: 296 WMVAL-SFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHDKTLYAVNVFLSIMMFFRLY 354

Query: 267 HKSTWSCR 290
               W CR
Sbjct: 355 ----WLCR 358


>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical protein
            T01H10.8 protein.
          Length = 2692

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +3

Query: 39   VTSETSLRYYKKIRNRWIVSIWSTTPHKQPPLDLTELN--IEKLPIQFVAPYHSDEYHEV 212
            V SE + RY+   RN  I  I       QP  D++E+N  +EKL     AP +    +E+
Sbjct: 1770 VESEIASRYWLDQRNEVISKINLKGRTPQPYCDVSEINFSLEKLQKSLAAPRNMKRINEI 1829


>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical protein
            T01H10.8 protein.
          Length = 2692

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +3

Query: 39   VTSETSLRYYKKIRNRWIVSIWSTTPHKQPPLDLTELN--IEKLPIQFVAPYHSDEYHEV 212
            V SE + RY+   RN  I  I       QP  D++E+N  +EKL     AP +    +E+
Sbjct: 1770 VESEIASRYWLDQRNEVISKINLKGRTPQPYCDVSEINFSLEKLQKSLAAPRNMKRINEI 1829


>Z82280-6|CAB05267.2|  460|Caenorhabditis elegans Hypothetical
           protein R05A10.6 protein.
          Length = 460

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
 Frame = +3

Query: 45  SETSLRYYKKIRNRWIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHEVLRHE 224
           ++  LR+Y+  +NR     W+  P K   + +       LP QF           VLR  
Sbjct: 372 AQAVLRHYRSTKNRMYQPNWNEIPDKFGVMPI--FKSVPLPEQFSKDLEEAVVQRVLRVY 429

Query: 225 SDLP---PSISRQLSLHHKSTWSCRKEKVTF 308
             +P    SI +QL+   K    C++  V F
Sbjct: 430 DSVPVNCSSIPKQLANSLKYPDPCKEPWVAF 460


>Z46934-6|CAA87045.3|  371|Caenorhabditis elegans Hypothetical
           protein ZK1320.7 protein.
          Length = 371

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 108 TTPHKQPPLDLTELNIEKLPIQFV 179
           TT ++ PP  L  LN E++P++FV
Sbjct: 3   TTNYQLPPQKLGNLNPEQVPVEFV 26


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,185,603
Number of Sequences: 27780
Number of extensions: 252778
Number of successful extensions: 688
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)