Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0340
(634 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 187 7e-48
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 187 7e-48
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 187 7e-48
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 187 7e-48
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 187 7e-48
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 187 7e-48
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 187 7e-48
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 187 7e-48
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 187 7e-48
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 187 7e-48
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 183 1e-46
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 124 7e-29
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 118 3e-27
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 118 3e-27
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 117 8e-27
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 117 8e-27
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 102 2e-22
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 99 3e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 70 1e-12
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.008
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.008
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 29 2.1
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 4.8
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 4.8
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 4.8
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 4.8
Z81050-2|CAB02852.1| 526|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.4
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 187 bits (455), Expect = 7e-48
Identities = 85/91 (93%), Positives = 87/91 (95%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA 508
APLNPKANREKMTQIMFETFNTPAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQA 139
Score = 118 bits (284), Expect = 3e-27
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +3
Query: 93 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 70.9 bits (166), Expect = 7e-13
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT +VLD DGV HTVPIYEGYALPHAILR L
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 187 bits (455), Expect = 7e-48
Identities = 85/91 (93%), Positives = 87/91 (95%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA 508
APLNPKANREKMTQIMFETFNTPAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQA 139
Score = 117 bits (281), Expect = 8e-27
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = +3
Query: 93 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 71.3 bits (167), Expect = 5e-13
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT IVLD DGV HTVPIYEGYALPHAILR L
Sbjct: 139 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 187 bits (455), Expect = 7e-48
Identities = 85/91 (93%), Positives = 87/91 (95%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA 508
APLNPKANREKMTQIMFETFNTPAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQA 139
Score = 118 bits (284), Expect = 3e-27
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +3
Query: 93 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 70.9 bits (166), Expect = 7e-13
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT +VLD DGV HTVPIYEGYALPHAILR L
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 187 bits (455), Expect = 7e-48
Identities = 85/91 (93%), Positives = 87/91 (95%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA 508
APLNPKANREKMTQIMFETFNTPAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQA 139
Score = 118 bits (284), Expect = 3e-27
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +3
Query: 93 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 70.9 bits (166), Expect = 7e-13
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT +VLD DGV HTVPIYEGYALPHAILR L
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 187 bits (455), Expect = 7e-48
Identities = 85/91 (93%), Positives = 87/91 (95%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA 508
APLNPKANREKMTQIMFETFNTPAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQA 139
Score = 118 bits (284), Expect = 3e-27
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +3
Query: 93 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 70.9 bits (166), Expect = 7e-13
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT +VLD DGV HTVPIYEGYALPHAILR L
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 187 bits (455), Expect = 7e-48
Identities = 85/91 (93%), Positives = 87/91 (95%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA 508
APLNPKANREKMTQIMFETFNTPAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQA 139
Score = 115 bits (277), Expect = 2e-26
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +3
Query: 93 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 71.3 bits (167), Expect = 5e-13
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT IVLD DGV HTVPIYEGYALPHAILR L
Sbjct: 139 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 187 bits (455), Expect = 7e-48
Identities = 85/91 (93%), Positives = 87/91 (95%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA 508
APLNPKANREKMTQIMFETFNTPAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQA 139
Score = 118 bits (284), Expect = 3e-27
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +3
Query: 93 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 70.9 bits (166), Expect = 7e-13
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT +VLD DGV HTVPIYEGYALPHAILR L
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 187 bits (455), Expect = 7e-48
Identities = 85/91 (93%), Positives = 87/91 (95%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA 508
APLNPKANREKMTQIMFETFNTPAMYVAIQA
Sbjct: 65 APLNPKANREKMTQIMFETFNTPAMYVAIQA 95
Score = 70.9 bits (166), Expect = 7e-13
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT +VLD DGV HTVPIYEGYALPHAILR L
Sbjct: 95 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 137
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 187 bits (455), Expect = 7e-48
Identities = 85/91 (93%), Positives = 87/91 (95%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA 508
APLNPKANREKMTQIMFETFNTPAMYVAIQA
Sbjct: 95 APLNPKANREKMTQIMFETFNTPAMYVAIQA 125
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +3
Query: 147 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 40
Score = 70.9 bits (166), Expect = 7e-13
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT +VLD DGV HTVPIYEGYALPHAILR L
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 167
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 187 bits (455), Expect = 7e-48
Identities = 85/91 (93%), Positives = 87/91 (95%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA 508
APLNPKANREKMTQIMFETFNTPAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQA 139
Score = 118 bits (284), Expect = 3e-27
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +3
Query: 93 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 70.9 bits (166), Expect = 7e-13
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT +VLD DGV HTVPIYEGYALPHAILR L
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 183 bits (445), Expect = 1e-46
Identities = 82/91 (90%), Positives = 86/91 (94%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA 508
APLNPK+NREKMTQIMFETFNTPAMYV IQA
Sbjct: 108 APLNPKSNREKMTQIMFETFNTPAMYVNIQA 138
Score = 111 bits (268), Expect = 3e-25
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +3
Query: 99 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 53
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/43 (76%), Positives = 35/43 (81%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT IVLD DGV HTVPIYEGYALPHAI R L
Sbjct: 138 AVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDL 180
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 124 bits (298), Expect = 7e-29
Identities = 52/93 (55%), Positives = 73/93 (78%), Gaps = 2/93 (2%)
Frame = +2
Query: 236 GTEG-LLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLL 409
G +G + +G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLL
Sbjct: 50 GLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLL 109
Query: 410 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 508
T+APLNP NRE+ +I FETFN PA+Y+ +QA
Sbjct: 110 TDAPLNPLKNRERSAEIFFETFNVPALYIQMQA 142
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT +VLD DGV H VPI +G+A+ HAI R L
Sbjct: 142 AVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDL 184
Score = 52.0 bits (119), Expect = 3e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +3
Query: 117 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 233
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 118 bits (284), Expect = 3e-27
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +3
Query: 93 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 349
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 118 bits (284), Expect = 3e-27
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +3
Query: 93 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 349
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 117 bits (281), Expect = 8e-27
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = +3
Query: 93 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 349
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 117 bits (281), Expect = 8e-27
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = +3
Query: 93 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDM 340
G + +GDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 102 bits (245), Expect = 2e-22
Identities = 47/97 (48%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 RDGRYGTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 397
R G + L++G+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 398 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 508
+LLTE PLNP +NREKM Q+MFE + ++YVA+QA
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQA 142
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++L+LYA G T +V+D DGV H P+YEG+AL H R +
Sbjct: 142 AVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDI 184
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 117 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 209
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 98.7 bits (235), Expect = 3e-21
Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 LGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 430
+GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN
Sbjct: 67 IGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNT 126
Query: 431 KANREKMTQIMFETFNTPAMYVAIQA 508
NRE +IMFE+FN P +Y+A+QA
Sbjct: 127 PENREYTAEIMFESFNVPGLYIAVQA 152
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 93 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 200
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 538 TRIVLDFRDGVFHTVPIYEGYALPHAI 618
T +V+D DGV H +P+ +GY + I
Sbjct: 171 TGLVIDSGDGVTHCIPVADGYVIGSCI 197
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/72 (41%), Positives = 45/72 (62%)
Frame = +2
Query: 305 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 484
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 485 AMYVAIQACSRC 520
A Y++ C
Sbjct: 154 AYYLSKNVVLSC 165
Score = 35.1 bits (77), Expect = 0.042
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +1
Query: 508 LLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILR 624
+LS +A GRT +++D VP+++GYA+ HA+++
Sbjct: 162 VLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVK 200
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 102 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 200
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 260 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 439
+E K + ++ PIE G V NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPAL 106
Query: 440 REKMTQIMFETF 475
+ ++I+F+ F
Sbjct: 107 PDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 260 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 439
+E K + ++ PIE G V NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPAL 106
Query: 440 REKMTQIMFETF 475
+ ++I+F+ F
Sbjct: 107 PDVSSEILFDYF 118
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 30.7 bits (66), Expect = 0.91
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = -2
Query: 354 CQIFSMSSQLVTIPC-SMGYLRVRIP---LLLCASSPNKSPSVPYRPSRPDG 211
CQ+FS QLVT+ SMG +++++ L L AS + P++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Frame = +2
Query: 392 EHPVLL--TEAPLNPKANREKMTQIMFE-TFNTPAMY-------VAIQACSRCTRXVVPP 541
+HP+LL T+ P+ N + + F+ T+++ M V I C + +R +
Sbjct: 724 QHPMLLFSTQQPMTCTPNSQNSCPLGFQCTYSSIRMLYFCCRDIVRIDKCLQGSRPEIWQ 783
Query: 542 VSCWTSATVSSTPCPSTKDTHFPTPF 619
+ A CPST + PTPF
Sbjct: 784 STAEPRACSRDAQCPSTTSCYAPTPF 809
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +2
Query: 431 KANREKMTQIMFETFNTPAMYVAIQACSRCTRXVVPPVSCWTSATVSSTPCPSTKDTHFP 610
K+ +E T I F T P S T +VP S T+ T ++TP P T T P
Sbjct: 428 KSTKEPKTTI-FTTTPVPCPTTTSTTTSATT--LVPTTSSSTTTTTTTTPVPVTSTTTEP 484
Query: 611 T 613
T
Sbjct: 485 T 485
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 197 RGKAPPSGRDGRYGTEGLLLGDEAQSKRG 283
RGKA +GRDGR G EG Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 376 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 501
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 172 ASSPAKPALHIPEPLSTTNAATSS 101
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 376 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 501
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 172 ASSPAKPALHIPEPLSTTNAATSS 101
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 376 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 501
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 172 ASSPAKPALHIPEPLSTTNAATSS 101
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 376 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 501
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 172 ASSPAKPALHIPEPLSTTNAATSS 101
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>Z81050-2|CAB02852.1| 526|Caenorhabditis elegans Hypothetical
protein C50B6.3 protein.
Length = 526
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -2
Query: 564 VAEVQHDTGGTTXRVQREQAWMATYMAGVLNVSNMIWVI 448
+AE+ +T G T V R W+ +++ +L+ +++IW I
Sbjct: 110 LAEIFANTPGNTSEVGRISTWLTSHLGALLH-NDVIWKI 147
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 147 KAGFAGDDAPRAVFPSIVGRPRHQG 221
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,269,977
Number of Sequences: 27780
Number of extensions: 379851
Number of successful extensions: 1558
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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