Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0340
(634 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 186 1e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 185 2e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 185 2e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 184 6e-47
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 183 1e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 183 1e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 182 2e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 182 2e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 182 2e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 164 5e-41
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 159 2e-39
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 153 9e-38
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 103 1e-22
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 93 1e-19
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 82 3e-16
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 66 2e-11
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 57 8e-09
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 55 5e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 47 9e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.090
At1g16690.2 68414.m01999 transcription factor-related similar to... 31 0.84
At1g16690.1 68414.m01998 transcription factor-related similar to... 31 0.84
At4g36960.1 68417.m05238 RNA recognition motif (RRM)-containing ... 30 1.5
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 29 2.6
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 29 3.4
At5g02810.1 68418.m00223 pseudo-response regulator 7 (APRR7) ide... 28 4.5
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 4.5
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.8
At2g46450.1 68415.m05780 cyclic nucleotide-regulated ion channel... 27 7.8
At1g55420.1 68414.m06339 DC1 domain-containing protein contains ... 27 7.8
At1g17540.1 68414.m02157 protein kinase-related similar to serin... 27 7.8
At1g02110.1 68414.m00137 proline-rich family protein contains pr... 27 7.8
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 186 bits (452), Expect = 1e-47
Identities = 84/91 (92%), Positives = 87/91 (95%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA 508
APLNPKANREKMTQIMFETFNTPAMYVAIQA
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQA 140
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +3
Query: 102 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
Score = 71.3 bits (167), Expect = 5e-13
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT IVLD DGV HTVPIYEGYALPHAILR L
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 185 bits (451), Expect = 2e-47
Identities = 84/91 (92%), Positives = 86/91 (94%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA 508
APLNPKANREKMTQIMFETFNTPAMYVAIQA
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQA 140
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +3
Query: 102 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
Score = 71.3 bits (167), Expect = 5e-13
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT IVLD DGV HTVPIYEGYALPHAILR L
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 185 bits (451), Expect = 2e-47
Identities = 84/91 (92%), Positives = 86/91 (94%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA 508
APLNPKANREKMTQIMFETFNTPAMYVAIQA
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQA 140
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +3
Query: 102 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
Score = 71.3 bits (167), Expect = 5e-13
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT IVLD DGV HTVPIYEGYALPHAILR L
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 184 bits (447), Expect = 6e-47
Identities = 83/91 (91%), Positives = 86/91 (94%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA 508
APLNPKANREKMTQIMFETFN PAMYVAIQA
Sbjct: 110 APLNPKANREKMTQIMFETFNVPAMYVAIQA 140
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +3
Query: 102 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
Score = 71.3 bits (167), Expect = 5e-13
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT IVLD DGV HTVPIYEGYALPHAILR L
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 82/91 (90%), Positives = 85/91 (93%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA 508
APLNPKANREKMTQIMFETFN PAMYVAIQA
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAMYVAIQA 140
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +3
Query: 102 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
Score = 71.3 bits (167), Expect = 5e-13
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT IVLD DGV HTVPIYEGYALPHAILR L
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 82/91 (90%), Positives = 85/91 (93%)
Frame = +2
Query: 236 GTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 415
G + +GDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 416 APLNPKANREKMTQIMFETFNTPAMYVAIQA 508
APLNPKANREKMTQIMFETFN PAMYVAIQA
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAMYVAIQA 140
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +3
Query: 102 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
Score = 71.3 bits (167), Expect = 5e-13
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT IVLD DGV HTVPIYEGYALPHAILR L
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 80/85 (94%), Positives = 85/85 (100%)
Frame = +2
Query: 254 LGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 433
+GDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPK 115
Query: 434 ANREKMTQIMFETFNTPAMYVAIQA 508
ANREKMTQIMFETFN+PAMYVAIQA
Sbjct: 116 ANREKMTQIMFETFNSPAMYVAIQA 140
Score = 90.6 bits (215), Expect = 7e-19
Identities = 38/51 (74%), Positives = 45/51 (88%)
Frame = +3
Query: 102 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+Y
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAY 55
Score = 68.5 bits (160), Expect = 3e-12
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT IVLD DGV HTVPIYEG++LPHAILR L
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDL 182
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 182 bits (443), Expect = 2e-46
Identities = 80/85 (94%), Positives = 85/85 (100%)
Frame = +2
Query: 254 LGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 433
+GDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPK 115
Query: 434 ANREKMTQIMFETFNTPAMYVAIQA 508
ANREKMTQIMFETFN+PAMYVAIQA
Sbjct: 116 ANREKMTQIMFETFNSPAMYVAIQA 140
Score = 90.6 bits (215), Expect = 7e-19
Identities = 38/51 (74%), Positives = 45/51 (88%)
Frame = +3
Query: 102 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+Y
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAY 55
Score = 68.5 bits (160), Expect = 3e-12
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT IVLD DGV HTVPIYEG++LPHAILR L
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDL 182
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 80/85 (94%), Positives = 85/85 (100%)
Frame = +2
Query: 254 LGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 433
+GDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPK 115
Query: 434 ANREKMTQIMFETFNTPAMYVAIQA 508
ANREKMTQIMFETFN+PAMYVAIQA
Sbjct: 116 ANREKMTQIMFETFNSPAMYVAIQA 140
Score = 90.6 bits (215), Expect = 7e-19
Identities = 38/51 (74%), Positives = 45/51 (88%)
Frame = +3
Query: 102 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+Y
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAY 55
Score = 68.5 bits (160), Expect = 3e-12
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLYA GRTT IVLD DGV HTVPIYEG++LPHAILR L
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDL 182
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 164 bits (398), Expect = 5e-41
Identities = 69/85 (81%), Positives = 80/85 (94%)
Frame = +2
Query: 254 LGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 433
+GDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK
Sbjct: 57 VGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPK 116
Query: 434 ANREKMTQIMFETFNTPAMYVAIQA 508
NREKMTQIMFE+F P+MY+ IQA
Sbjct: 117 VNREKMTQIMFESFAFPSMYIGIQA 141
Score = 89.4 bits (212), Expect = 2e-18
Identities = 38/51 (74%), Positives = 46/51 (90%)
Frame = +3
Query: 102 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 254
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTF 56
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++LSLY+ GRTT IVLD DGV HTVPIYEGYALPHAILR L
Sbjct: 141 AVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 183
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 159 bits (385), Expect = 2e-39
Identities = 67/87 (77%), Positives = 81/87 (93%)
Frame = +2
Query: 248 LLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 427
L +GD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLN
Sbjct: 9 LFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLN 68
Query: 428 PKANREKMTQIMFETFNTPAMYVAIQA 508
PKA+REKMTQIMFETF P+MY+ +QA
Sbjct: 69 PKADREKMTQIMFETFAVPSMYIGMQA 95
Score = 58.0 bits (134), Expect = 5e-09
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +1
Query: 511 LSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
LSL+A GRTT VLD DGV + VPIYEG ALPHAILR L
Sbjct: 97 LSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDL 137
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 153 bits (371), Expect = 9e-38
Identities = 70/96 (72%), Positives = 80/96 (83%)
Frame = +2
Query: 221 RDGRYGTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 400
RDG E + G+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYV-GEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 401 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 508
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQS 129
Score = 62.5 bits (145), Expect = 2e-10
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
S+L LY+ GRTT +VLD + V HTVP+YEGYALPH ILR L
Sbjct: 129 SVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDL 171
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +3
Query: 117 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 212
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 103 bits (246), Expect = 1e-22
Identities = 41/87 (47%), Positives = 59/87 (67%)
Frame = +2
Query: 248 LLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 427
+++G+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLN
Sbjct: 53 IVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLN 112
Query: 428 PKANREKMTQIMFETFNTPAMYVAIQA 508
P NREKM + MFE +N +++ IQA
Sbjct: 113 PSKNREKMIETMFEKYNFAGVFIQIQA 139
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +1
Query: 505 SLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAILRFGL 633
++L+LYA G T +V+D DGV H VP+ +GY+ PH R +
Sbjct: 139 AVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNV 181
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 117 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 209
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 93.1 bits (221), Expect = 1e-19
Identities = 44/88 (50%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = +2
Query: 254 LGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 424
+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL
Sbjct: 70 IGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPL 129
Query: 425 NPKANREKMTQIMFETFNTPAMYVAIQA 508
P +RE +I+FETFN P +Y+A+ +
Sbjct: 130 TPPESREYTGEILFETFNVPGLYIAVNS 157
Score = 35.9 bits (79), Expect = 0.022
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 114 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 200
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 538 TRIVLDFRDGVFHTVPIYEGYALPHAI 618
T +V+D DG H VP+ EGY + I
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCI 199
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 81.8 bits (193), Expect = 3e-16
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +2
Query: 248 LLLGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 424
L +G +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PL
Sbjct: 75 LYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPL 134
Query: 425 NPKANREKMTQIMFETFNTPAMYVA 499
N + REK ++MFE + PA+++A
Sbjct: 135 NTQQQREKAAELMFEKYKVPALFMA 159
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 102 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 203
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 31.5 bits (68), Expect = 0.48
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 481 ARHVRRHPSLLSLYAXGRTTRIVLDFRDGVFHTVPIYEGYALPHAIL 621
A + ++P L S +A GR T +V+D G P+++GY L A++
Sbjct: 155 ALFMAKNPVLTS-FATGRATSLVVDCGGGSTTISPVHDGYVLQKAVV 200
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 65.7 bits (153), Expect = 2e-11
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +2
Query: 224 DGRYGTEGLLLGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 400
D G L G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 401 VLLTEAPLNPKANREK 448
+LL E PLN + REK
Sbjct: 121 MLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 8e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 102 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 203
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 57.2 bits (132), Expect = 8e-09
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 302 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 478
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 479 TPAMYVAIQA 508
Y + QA
Sbjct: 117 VSGFYASEQA 126
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 114 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 206
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 54.8 bits (126), Expect = 5e-08
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +2
Query: 293 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 472
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 473 FNTPAMYVA 499
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 117 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 209
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 47.2 bits (107), Expect = 9e-06
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 302 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 478
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 479 TPAMYVAIQA 508
PA+ + A
Sbjct: 145 VPAVAFGVDA 154
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 117 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 218
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.090
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 238 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 101
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 30.7 bits (66), Expect = 0.84
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +2
Query: 248 LLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 427
LL D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYN 220
Query: 428 PKANREK 448
REK
Sbjct: 221 VFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 30.7 bits (66), Expect = 0.84
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +2
Query: 248 LLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 427
LL D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYN 220
Query: 428 PKANREK 448
REK
Sbjct: 221 VFRPREK 227
>At4g36960.1 68417.m05238 RNA recognition motif (RRM)-containing
protein similar to SP|P48809 Heterogeneous nuclear
ribonucleoprotein 27C (hnRNP 48) {Drosophila
melanogaster}; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM);
non-consensus TA donor splice site at exon 6
Length = 379
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -2
Query: 630 SKTQNGVGKCVSFVDGHGVEDTVAEVQHDTGGTTXRVQR 514
SK G+G ++F VED + + HD GGTT V R
Sbjct: 128 SKQHRGIG-FITFSSADSVEDLMEDT-HDLGGTTVAVDR 164
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 233 YGTEGLLLGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 370
Y +G LG+E SK+ I+ ++ ++ + W+D+ K H N
Sbjct: 180 YYKDGEPLGEEEDSKKEIIFRRHIVDRMPIDGWNDVWKKLHQQIVN 225
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +1
Query: 415 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSLLSLYAXGRTTRIVLDFRDGVFHTV 582
GSP+ +G + E+D D + NI+H + +H + LY R D +G F V
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLYGKMSYGRGPEDDENGRFPPV 149
>At5g02810.1 68418.m00223 pseudo-response regulator 7 (APRR7)
identical to pseudo-response regulator 7 GI:10281004
from [Arabidopsis thaliana]
Length = 727
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -3
Query: 587 MGTVWKTPSRKSSTIRVVRPXAYSESRLGWRRTWRAC*MFRT*SGSSS 444
MG V+K S K + +V+P +E ++ W+ WR C ++ SGS S
Sbjct: 165 MGLVFKCLS-KGAVDFLVKPIRKNELKILWQHVWRRC---QSSSGSGS 208
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2
Query: 348 IFSMSSQLVTIPCSMGYLRVRIPLLLCASSPNKSPSVP 235
IFS SS+LVT P S+ +R R ++L SS + P
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSSSSGGGGKP 47
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 214 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 92
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At2g46450.1 68415.m05780 cyclic nucleotide-regulated ion channel,
putative (CNGC12) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc3) GI:4581201 from
[Arabidopsis thaliana]
Length = 636
Score = 27.5 bits (58), Expect = 7.8
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = -2
Query: 270 CASSPNKSPSVPYRPS 223
C+SSP+ SP VP++P+
Sbjct: 612 CSSSPDMSPPVPHKPA 627
>At1g55420.1 68414.m06339 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 725
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -2
Query: 399 GCSSGATRSSL*K-V*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPNKSPSVPY 232
GC S + S + + C+ F + + T+PC Y R PL LC + S Y
Sbjct: 529 GCGSDSCSSYFLECIKCKSF-LGIKCATLPCEAHYTHDRHPLTLCYEEEEDTTSGQY 584
>At1g17540.1 68414.m02157 protein kinase-related similar to
serine/threonine protein kinase Fen [Lycopersicon
esculentum] GI:1809259
Length = 733
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 421 PQ-PQGQQREDDPDHVRNIQHARHVRRHPSLLS 516
PQ PQG P + QH H +HPS++S
Sbjct: 160 PQTPQGPHTPQGPQTPQAPQHPPHPSKHPSMMS 192
>At1g02110.1 68414.m00137 proline-rich family protein contains
proline-rich domain, INTERPRO:IPR000694
Length = 679
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 288 RIPLLLCASSPNKSPSVPYRPSRPDGGAFPRS 193
R+P +L SSP+ SP+ + P+ + RS
Sbjct: 107 RLPHILSDSSPSSSPATSFYPTAHQNSTYSRS 138
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,535,738
Number of Sequences: 28952
Number of extensions: 363610
Number of successful extensions: 1124
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1295224128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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