Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0336
         (589 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    24   3.2  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    23   5.5  
EF426163-1|ABO26406.1|  155|Anopheles gambiae unknown protein.         23   9.7  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = -3

Query: 431 CTLSCSNNFGQGMSP*RCCMTRAPCW*RCQCHG 333
           CT+  S   G G    R  +T  PCW     HG
Sbjct: 419 CTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHG 451


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = +1

Query: 232 VRCKLEPRSLRRHGNEVYLVYQHHRVNPVSCGLEP*HWHRYQHGALVMQHLQGLMPWPKL 411
           +R K+ P + ++ G+E + ++QH          +  H  R     L  Q +Q ++PWP L
Sbjct: 141 LRRKMLPYARQKFGDEEHYIFQHDN--------DSKHTSRTVKCYLANQDVQ-VLPWPAL 191

Query: 412 LEQLS 426
              L+
Sbjct: 192 SPDLN 196


>EF426163-1|ABO26406.1|  155|Anopheles gambiae unknown protein.
          Length = 155

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -3

Query: 269 CLLSDLGSSLQRTSLQES*LRCPDCPMTKTGSCSGS 162
           CL +D        S   S +R  DC +  T  C+G+
Sbjct: 98  CLFNDKSMCSLMQSALPSEIRIVDCDLCTTELCNGA 133


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,815
Number of Sequences: 2352
Number of extensions: 10524
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)