Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0332
         (306 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   0.72 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   2.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   2.9  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    20   5.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    19   8.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    19   8.8  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    19   8.8  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          19   8.8  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 0.72
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -2

Query: 287 YFFWIVILYYVILRKLVRLSVMNQSISTFNNYRYLFVLSET 165
           +FF+ ++LY +    L+R   +N+ I    +  +LF++  T
Sbjct: 160 HFFYQLLLYLITDMILMRYKELNRVILDNMSRNHLFLVRRT 200


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 195 LPLSIRAIGDSANAHDGAAVRSGANHSDK 109
           L L   A+G SAN   G +  +  N + K
Sbjct: 331 LSLHCAAVGGSANIMSGCSTSTSTNINTK 359


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -2

Query: 290 CYFFWIVILYYV 255
           CYF ++  +YY+
Sbjct: 148 CYFIYLFTVYYI 159


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 5.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 233 LSVMNQSISTFNNYRY 186
           LS  N + + +NNY Y
Sbjct: 243 LSTTNSTTNCYNNYPY 258


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 287 YFFWIVILYYVILRKL 240
           YFF++  +Y    RKL
Sbjct: 87  YFFYLSYIYTTYSRKL 102


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 287 YFFWIVILYYVILRKL 240
           YFF++  +Y    RKL
Sbjct: 43  YFFYLSYIYTTYSRKL 58


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 221 NQSISTFNNYR 189
           NQ+ S +NNY+
Sbjct: 218 NQAYSNYNNYQ 228


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 221 NQSISTFNNYR 189
           NQ+ S +NNY+
Sbjct: 238 NQAYSNYNNYQ 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,324
Number of Sequences: 336
Number of extensions: 838
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5518292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)