Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0331
         (670 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            28   0.31 
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   3.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.0  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   6.6  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   6.6  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -2

Query: 285  SRCILQPRLFKTNVQSLSKFKTG 217
            SR ILQ +L+  N QSL+ FK G
Sbjct: 3267 SRHILQHKLYSNNSQSLNNFKFG 3289


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +3

Query: 408 EENQGCGWCLCTICVNNXXXXXXXXVDSR 494
           EE  G G C+C +CV          +D R
Sbjct: 558 EECSGRGQCVCGVCVCERRPNPDELIDGR 586


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 285  SRCILQPRLFKTNVQSLSKFKTG 217
            SR ILQ + +  N QSL+ F  G
Sbjct: 3270 SRHILQHKFYSNNSQSLNNFTFG 3292


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -1

Query: 601 AIKLGNARVFPVTTL*NDGQ*IVIRLTIGRIGTGPPL 491
           ++ LGN   FP T L N G   VI   I  +  G P+
Sbjct: 92  SVGLGNVWRFPFTALENGGGAFVIPYLIVLLLVGRPI 128


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -1

Query: 601 AIKLGNARVFPVTTL*NDGQ*IVIRLTIGRIGTGPPL 491
           ++ LGN   FP T L N G   VI   I  +  G P+
Sbjct: 92  SVGLGNVWRFPFTALENGGGAFVIPYLIVLLLVGRPI 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,937
Number of Sequences: 2352
Number of extensions: 13588
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)