Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0326
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.9  
AM269505-2|CAK30049.1|   12|Tribolium castaneum mlpt peptide 2 p...    22   3.9  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
 Frame = -3

Query: 535 IYLVQTD*EN-VVGYFVQIEQLLVNAGYSYEDTLIVACPTPEQISVFISSASLISHSEPV 359
           I+ ++TD  N + G   QI    +NA    ++      PTPE         +  + SEP 
Sbjct: 360 IWSIETDDFNGLSGTKYQILNA-INAALKSDEIPPEPVPTPEP------QPTQTTESEPT 412

Query: 358 LPYGTKAKPSVVRKPSVTSVPEKLEE 281
                  + S  +KP  T  PE   E
Sbjct: 413 QASEQPTESSTTQKPQTTKTPESGNE 438


>AM269505-2|CAK30049.1|   12|Tribolium castaneum mlpt peptide 2
           protein.
          Length = 12

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 205 GGKLRPSGQY 234
           GGKL P+GQY
Sbjct: 3   GGKLDPTGQY 12


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,468
Number of Sequences: 336
Number of extensions: 2580
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)