Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0326
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051613-1|AAK93037.1|  905|Drosophila melanogaster GH25768p pro...    80   2e-15
AE014134-604|AAF51107.2|  905|Drosophila melanogaster CG3248-PA ...    80   2e-15

>AY051613-1|AAK93037.1|  905|Drosophila melanogaster GH25768p protein.
          Length = 905

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 40/97 (41%), Positives = 63/97 (64%)
 Frame = -3

Query: 625  VVKEVQKRIKAHLAPLQRSMQLYFSQ*GD*IYLVQTD*ENVVGYFVQIEQLLVNAGYSYE 446
            +++E Q+ IKA LA LQRSMQLY S       + +    N++  FV++EQLL   GYS +
Sbjct: 743  IIQETQRLIKAKLAVLQRSMQLYLSNRDTEFIIFRPIRNNIIQSFVKLEQLLTTNGYSTD 802

Query: 445  DTLIVACPTPEQISVFISSASLISHSEPVLPYGTKAK 335
            D +I +CP+ EQ+S+ +SSAS+++ +E V  +   A+
Sbjct: 803  DMIITSCPSAEQVSILLSSASILA-AEGVASFAAAAR 838


>AE014134-604|AAF51107.2|  905|Drosophila melanogaster CG3248-PA
            protein.
          Length = 905

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 40/97 (41%), Positives = 63/97 (64%)
 Frame = -3

Query: 625  VVKEVQKRIKAHLAPLQRSMQLYFSQ*GD*IYLVQTD*ENVVGYFVQIEQLLVNAGYSYE 446
            +++E Q+ IKA LA LQRSMQLY S       + +    N++  FV++EQLL   GYS +
Sbjct: 743  IIQETQRLIKAKLAVLQRSMQLYLSNRDTEFIIFRPIRNNIIQSFVKLEQLLTTNGYSTD 802

Query: 445  DTLIVACPTPEQISVFISSASLISHSEPVLPYGTKAK 335
            D +I +CP+ EQ+S+ +SSAS+++ +E V  +   A+
Sbjct: 803  DMIITSCPSAEQVSILLSSASILA-AEGVASFAAAAR 838


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,825,876
Number of Sequences: 53049
Number of extensions: 443252
Number of successful extensions: 1003
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)