Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0324
(672 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0585 - 5237547-5237930,5237995-5238072,5238163-5238405,523... 130 1e-30
01_01_0629 - 4738519-4738607,4738700-4738828,4738921-4739011,473... 126 2e-29
01_06_0670 + 31069976-31070073,31070461-31070581,31070669-310707... 124 9e-29
02_05_0228 - 27010982-27011272,27011401-27011506,27011616-270117... 117 1e-26
01_06_0551 + 30159789-30159946,30160509-30160629,30160714-301607... 117 1e-26
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026... 95 5e-20
07_03_0474 + 18534071-18534238,18534349-18534445,18534992-185351... 89 3e-18
06_03_0382 - 20142830-20144329 31 0.63
05_05_0165 + 22851863-22852566,22852811-22852964,22853112-228532... 31 0.84
10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595 30 1.9
05_01_0110 - 741968-742279 30 1.9
04_03_0634 - 18211054-18212169,18213449-18214219 30 1.9
08_01_0680 - 5958066-5960253,5960707-5961503 29 3.4
03_06_0416 - 33780911-33781861 29 4.5
05_07_0222 - 28490262-28490792 28 5.9
12_01_0725 + 6428572-6428817 28 7.8
08_01_0017 + 132109-132924 28 7.8
>05_01_0585 -
5237547-5237930,5237995-5238072,5238163-5238405,
5238515-5238661,5238780-5238863,5238969-5239040,
5239153-5239248,5239345-5239410,5239537-5239642,
5239749-5239900,5240238-5240433,5240791-5240879
Length = 570
Score = 130 bits (313), Expect = 1e-30
Identities = 64/137 (46%), Positives = 85/137 (62%)
Frame = +3
Query: 252 QYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDK 431
+YI +M L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G +YRRP+GL+I++ DK
Sbjct: 87 RYIAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKDK 146
Query: 432 GHVYDVLKNWPETDVRAIVVTDGERXXXXXXXXXXXXXSLWANSRSTPRFGGIKPSINGL 611
G + +VLKNWPE ++ IVVTDGER GG++PS L
Sbjct: 147 GKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSA-CL 205
Query: 612 PITI*RGYEQPSPCLDQ 662
PITI G S D+
Sbjct: 206 PITIDVGTNNESLLNDE 222
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +1
Query: 82 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPL 249
SG L+ P NKG+AF+ ER + GLLPP + +QE Q + ++ Y PL
Sbjct: 30 SGYTLLRDPRHNKGLAFSEAERDAHYLRGLLPPSIVSQELQEKKLMHNLRNYTVPL 85
>01_01_0629 -
4738519-4738607,4738700-4738828,4738921-4739011,
4739103-4739177,4739529-4739618,4739742-4739840,
4739934-4739987,4740084-4740131,4740232-4740330,
4740458-4740541,4740650-4740721,4740812-4740907,
4741012-4741077,4741148-4741253,4741350-4741501,
4741634-4741708,4741792-4741912,4742968-4743209,
4743328-4743381
Length = 613
Score = 126 bits (303), Expect = 2e-29
Identities = 58/124 (46%), Positives = 82/124 (66%)
Frame = +3
Query: 252 QYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDK 431
+Y+ +M L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G ++R+P+GL++++ DK
Sbjct: 156 RYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRQPQGLYVSLKDK 215
Query: 432 GHVYDVLKNWPETDVRAIVVTDGERXXXXXXXXXXXXXSLWANSRSTPRFGGIKPSINGL 611
G V DVL+NWPE +++ IVVTDGER GG++PS L
Sbjct: 216 GKVLDVLRNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSA-CL 274
Query: 612 PITI 623
PITI
Sbjct: 275 PITI 278
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +1
Query: 82 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPL 249
SG L+ P NKG+AF+ +ER + GLLPP V +Q+ QV+ ++ +Y PL
Sbjct: 99 SGYTLLRDPHHNKGLAFSEKERDAHYLRGLLPPAVVSQDLQVKKIMHNLRQYSVPL 154
>01_06_0670 +
31069976-31070073,31070461-31070581,31070669-31070743,
31070863-31071014,31071171-31071276,31071409-31071474,
31071562-31071657,31071764-31071835,31071925-31072008,
31072147-31072245,31072721-31072768,31072857-31072910,
31072991-31073089,31073182-31073271,31073371-31073448,
31073584-31073658,31073806-31073896,31074014-31074142,
31074235-31074323
Length = 573
Score = 124 bits (298), Expect = 9e-29
Identities = 57/124 (45%), Positives = 81/124 (65%)
Frame = +3
Query: 252 QYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDK 431
+Y+ LM L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G ++RRP+GL+I++ +K
Sbjct: 90 RYMALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEK 149
Query: 432 GHVYDVLKNWPETDVRAIVVTDGERXXXXXXXXXXXXXSLWANSRSTPRFGGIKPSINGL 611
G + ++L+NWPE ++ IVVTDGER GG++PS L
Sbjct: 150 GRILELLRNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSA-CL 208
Query: 612 PITI 623
PITI
Sbjct: 209 PITI 212
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +1
Query: 82 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPL 249
SG L+ P NKG++FT +ER + GLLPP V +QE Q + ++ +++ PL
Sbjct: 33 SGHSLLRDPRHNKGLSFTEKERDAHYLRGLLPPVVLSQELQEKRLLQNVRQFQVPL 88
>02_05_0228 -
27010982-27011272,27011401-27011506,27011616-27011767,
27011919-27011930
Length = 186
Score = 117 bits (281), Expect = 1e-26
Identities = 46/76 (60%), Positives = 64/76 (84%)
Frame = +3
Query: 279 DRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHVYDVLKN 458
+R+E LFY+ + DNV E++P+VYTPTVG ACQK+G +YRRP+GL+I++ DKG + +VLKN
Sbjct: 5 ERSERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKDKGKILEVLKN 64
Query: 459 WPETDVRAIVVTDGER 506
WPE ++ IV+TDGER
Sbjct: 65 WPERSIQVIVITDGER 80
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +2
Query: 509 LGLGDLGACGMGIPVGKLALYTAL 580
LGLGDLG GMGIPVGKL+LYTAL
Sbjct: 82 LGLGDLGCQGMGIPVGKLSLYTAL 105
>01_06_0551 +
30159789-30159946,30160509-30160629,30160714-30160788,
30160877-30161028,30161103-30161208,30161298-30161363,
30161623-30161694,30161849-30161932,30162108-30162206,
30162841-30162888,30162986-30163039,30163137-30163235,
30163321-30163410,30163503-30163580,30163699-30163773,
30163866-30163956,30164282-30164410,30164501-30164589
Length = 561
Score = 117 bits (281), Expect = 1e-26
Identities = 47/85 (55%), Positives = 68/85 (80%)
Frame = +3
Query: 252 QYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDK 431
+Y+ +M L + NE LFY+ + DNV E++P+VYTPTVG ACQK+G ++ RP+GL+I++ +K
Sbjct: 110 KYMAMMDLQEGNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFSRPQGLYISLKEK 169
Query: 432 GHVYDVLKNWPETDVRAIVVTDGER 506
G + +VLKNWPE ++ IVVTDGER
Sbjct: 170 GKILEVLKNWPERSIQVIVVTDGER 194
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Frame = +2
Query: 509 LGLGDLGACGMGIPVGKLALYTALRRHQALNQWS--THHYLTWVR 637
LGLGDLG GMGIPVGKLALYTAL + +++ H ++T V+
Sbjct: 196 LGLGDLGCQGMGIPVGKLALYTALGGVRPSAEYADFLHEFMTAVK 240
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +1
Query: 82 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPL 249
SG + L+ P NKG+AF ER+ + GLLPP + +QE Q +I +Y+ PL
Sbjct: 53 SGYNLLRDPRYNKGLAFNERERETHYLRGLLPPAIVSQELQERKIMHNIRQYQLPL 108
>10_08_0551 +
18702081-18702251,18702328-18702424,18702533-18702651,
18702757-18702924,18703296-18703424,18703659-18703719,
18703813-18703916,18704173-18704279,18704319-18704493,
18704657-18704770,18704883-18704966,18705536-18705608,
18705689-18705775,18705863-18705917,18706007-18706078,
18706470-18706532,18706640-18706754,18706844-18706915
Length = 621
Score = 95.1 bits (226), Expect = 5e-20
Identities = 39/78 (50%), Positives = 54/78 (69%)
Frame = +3
Query: 273 LLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHVYDVL 452
L DRNE L+YR + DN+ + PI+YTPTVGL C+ + ++RRPRG++ + DKG + ++
Sbjct: 119 LHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFRRPRGMYFSAKDKGEMMSMI 178
Query: 453 KNWPETDVRAIVVTDGER 506
NWP V IVVTDG R
Sbjct: 179 YNWPAEKVDMIVVTDGSR 196
Score = 44.4 bits (100), Expect = 8e-05
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +1
Query: 85 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVE 210
G D L P NK AF + ER LG+ GLLPPRV + E+Q +
Sbjct: 46 GTDILHDPWFNKDTAFPMTERDRLGLRGLLPPRVMSFEQQYD 87
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2
Query: 509 LGLGDLGACGMGIPVGKLALYTA 577
LGLGDLG G+GIP+GKL +Y A
Sbjct: 198 LGLGDLGVQGIGIPIGKLDVYVA 220
>07_03_0474 +
18534071-18534238,18534349-18534445,18534992-18535122,
18535191-18535286,18535459-18535464,18535521-18535688,
18535892-18536020,18536613-18536673,18536928-18537031,
18537137-18537220,18538433-18538461,18538506-18538617,
18539200-18539313,18539767-18539832,18540237-18540309,
18540396-18540482,18540710-18540764,18540869-18540940,
18541039-18541101,18541177-18541294,18541377-18541451
Length = 635
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/80 (48%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Frame = +3
Query: 273 LLDRNEHLFYR--FVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHVYD 446
L DRNE ++Y+ + DN+ E PIVYTPTVGL CQ + ++RRPRG++ + D+G +
Sbjct: 154 LHDRNETMYYKAEVLIDNIEEHAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMMS 213
Query: 447 VLKNWPETDVRAIVVTDGER 506
++ NWP V IVVTDG R
Sbjct: 214 MVYNWPADQVDMIVVTDGSR 233
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 85 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVE 210
G D L P N+G F++ ER LG+ GLLPP V + ++Q++
Sbjct: 45 GSDILHDPWFNRGTGFSMTERDRLGLRGLLPPNVVSSQQQID 86
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +2
Query: 509 LGLGDLGACGMGIPVGKLALYTA 577
LGLGDLG G+GI +GKL LY A
Sbjct: 235 LGLGDLGVHGIGIAIGKLDLYVA 257
>06_03_0382 - 20142830-20144329
Length = 499
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1
Query: 567 SASLPTGMPIPQAPKSPRPK 508
SASLP +P+P P+ PRPK
Sbjct: 340 SASLPLPLPLPPRPRMPRPK 359
>05_05_0165 +
22851863-22852566,22852811-22852964,22853112-22853261,
22853769-22853930,22854070-22854242,22854330-22854396,
22854556-22854722,22855216-22855374,22856187-22856276,
22856392-22856483,22856587-22856681,22857328-22857405,
22858364-22858459,22859132-22859206,22859290-22859381,
22859462-22859624,22859734-22859794,22860016-22860116,
22860567-22860614
Length = 908
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -2
Query: 122 PLLRPGCLRWSRPERPL--VGCPSPEPHNPIRSRSIS 18
PL PGC R R R L + PSP P + RS+S+S
Sbjct: 22 PLRSPGCRRRRRRGRVLSALSSPSPSPSSASRSQSVS 58
>10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595
Length = 514
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -2
Query: 158 PKS*RSSMVKAMPLLRPGCLRWSRPERPLVG-CPSPEPHNPIRS 30
P+S SS K +PL RP SRPE P S P P S
Sbjct: 217 PQSSHSSYSKILPLFRPKSNSRSRPESPAASDAASQTPFRPTES 260
>05_01_0110 - 741968-742279
Length = 103
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -3
Query: 607 PLIEGLMPPKRGVEREFAHRDAHPAGAQIAQAQIRSPSVTT 485
PL G PP+RG+ER A R A A +A + SP TT
Sbjct: 16 PLPGGPAPPRRGLERRIAAR-GRRAVAWEPRAAVGSPRATT 55
>04_03_0634 - 18211054-18212169,18213449-18214219
Length = 628
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 567 SASLPTGMPIPQAPKSPRPKYVLRRLQQWRGRPSPASS 454
S S+P +P+P P SPR R RP P ++
Sbjct: 2 SPSMPQPLPLPSPPSSPRSGATTTTTTSVRARPRPPTA 39
>08_01_0680 - 5958066-5960253,5960707-5961503
Length = 994
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 4 KCTYSEMERDRIGLWGSGDGQPTSGLSGLDHLKHPGL 114
K Y E R+ IG WGSG G+ + HL + L
Sbjct: 380 KKEYWESIRNSIGTWGSGTNPTLEGMRQILHLSYKDL 416
>03_06_0416 - 33780911-33781861
Length = 316
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -1
Query: 411 RGPLVGGTQARTSDRPGQPSECTQLASFQPRYPRRNGRTDAHCGPRAP 268
R P GGT +R + P P+ P P R GR PRAP
Sbjct: 17 RSPTAGGTPSRLAVAPPSPTTPQCAIPASPHTPGR-GRAPPPATPRAP 63
>05_07_0222 - 28490262-28490792
Length = 176
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 552 TGMPIPQAPKSPRPKYVLRRLQQWRGRPSPASS*EHRIHV 433
+GM +P AP+ P+ V RR Q RP + E R+ V
Sbjct: 96 SGMSLPNAPEGLWPRRVPRRKQLPAARPGQLTDFEQRLVV 135
>12_01_0725 + 6428572-6428817
Length = 81
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -2
Query: 146 RSSMVKAMPLLRP-GCLRWSRPERPLVGCPSPEP-HNP 39
R+ V+ P++ P GC R E CP+P P H+P
Sbjct: 44 RALQVRPSPVVEPSGCCSGHRSEAVASWCPNPTPCHDP 81
>08_01_0017 + 132109-132924
Length = 271
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2
Query: 254 LLSGFSYLSIESLHSSTCSSC 192
L +GFS+ S +S HSSTCS C
Sbjct: 85 LSAGFSFASRDS-HSSTCSCC 104
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,568,607
Number of Sequences: 37544
Number of extensions: 522743
Number of successful extensions: 1637
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1633
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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