Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0324
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    24   3.8  
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    23   6.6  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.6  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   8.8  

>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 40  GLWGSGDGQPTSG 78
           GLWGSG+G  T G
Sbjct: 359 GLWGSGNGTNTFG 371


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +2

Query: 170 CYHHESRRKRSRLNYASSRSIDTKIHLTIHLSYGALG 280
           CY+  S   R  L   +   I+  +    HL YG  G
Sbjct: 35  CYYDGSNALREGLGKVTVSDIELALPFCTHLMYGYAG 71


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +2

Query: 173 YHHESRRKRSRLNYASSRSIDTKIHLTIHLSYGALGPQ*ASV 298
           +HH+    + R+ Y   R+++ K    +  SY   G Q A V
Sbjct: 426 HHHQQVHNQQRILYCFCRNVECK---ELEKSYHTFGAQIADV 464


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 19  EMERDRIGLWGSGDGQPTSGLSGLDHLKHP 108
           E+ +  IGL GSG G P+S    ++ +  P
Sbjct: 728 ELMQRSIGLGGSGAGGPSSSPPVMESIPPP 757


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,943
Number of Sequences: 2352
Number of extensions: 17639
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)