Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0322
(660 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_56| Best HMM Match : Actin (HMM E-Value=0) 183 1e-46
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 183 1e-46
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 1e-19
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 3e-19
SB_54| Best HMM Match : Actin (HMM E-Value=0) 68 6e-12
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 55 4e-08
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 55 4e-08
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 54 1e-07
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 53 2e-07
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 49 4e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.039
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 34 0.089
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.63
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.63
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_12332| Best HMM Match : PI-PLC-X (HMM E-Value=0) 29 3.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 183 bits (445), Expect = 1e-46
Identities = 82/82 (100%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 95.1 bits (226), Expect = 5e-20
Identities = 43/46 (93%), Positives = 45/46 (97%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 55.2 bits (127), Expect = 4e-08
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = +1
Query: 511 MYVAIQAVLSLYAFRSYHPVSCWTPATVSSTPVPIYQGYALPHAILRLDL 660
MYVAIQAVLSLYA + + V+ T VPIY+GYALPHAI+RLDL
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPHAIIRLDL 181
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 183 bits (445), Expect = 1e-46
Identities = 82/82 (100%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 47 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 106
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 107 EAPLNPKANREKMTQIMFETFN 128
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +3
Query: 123 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 45
Score = 56.0 bits (129), Expect = 3e-08
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = +1
Query: 511 MYVAIQAVLSLYAFRSYHPVSCWTPATVSSTPVPIYQGYALPHAILRLDL 660
MYVAIQAVLSLYA + + V+ T VPIY+GYALPHAILRLDL
Sbjct: 132 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPHAILRLDL 180
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 183 bits (445), Expect = 1e-46
Identities = 82/82 (100%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 47 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 106
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 107 EAPLNPKANREKMTQIMFETFN 128
Score = 93.5 bits (222), Expect = 1e-19
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = +3
Query: 123 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 45
Score = 56.0 bits (129), Expect = 3e-08
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = +1
Query: 511 MYVAIQAVLSLYAFRSYHPVSCWTPATVSSTPVPIYQGYALPHAILRLDL 660
MYVAIQAVLSLYA + + V+ T VPIY+GYALPHAILRLDL
Sbjct: 132 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPHAILRLDL 180
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 183 bits (445), Expect = 1e-46
Identities = 82/82 (100%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 56.0 bits (129), Expect = 3e-08
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = +1
Query: 511 MYVAIQAVLSLYAFRSYHPVSCWTPATVSSTPVPIYQGYALPHAILRLDL 660
MYVAIQAVLSLYA + + V+ T VPIY+GYALPHAILRLDL
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPHAILRLDL 181
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 183 bits (445), Expect = 1e-46
Identities = 82/82 (100%), Positives = 82/82 (100%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 436
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANREKMTQIMFETFN 502
EAPLNPKANREKMTQIMFETFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 95.1 bits (226), Expect = 5e-20
Identities = 41/46 (89%), Positives = 45/46 (97%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +1
Query: 511 MYVAIQAVLSLYAFRSYHPVSCWTPATVSSTPVPIYQ--GYA 630
MYVAIQAVLSLYA + + VS T VPIY+ GY+
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVMDSGDGVSHT-VPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +3
Query: 123 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 45
Score = 91.5 bits (217), Expect = 6e-19
Identities = 41/44 (93%), Positives = 41/44 (93%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 388
MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 47 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 55.2 bits (127), Expect = 4e-08
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = +1
Query: 511 MYVAIQAVLSLYAFRSYHPVSCWTPATVSSTPVPIYQGYALPHAILRLDL 660
MYVAIQAVLSLYA + + V+ T VPIY+GYALPHAI+RLDL
Sbjct: 95 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPHAIIRLDL 143
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 92.3 bits (219), Expect = 3e-19
Identities = 42/88 (47%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +2
Query: 239 SGRDGRMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 415
S + G + KD VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 416 EHPVLLTEAPLNPKANREKMTQIMFETF 499
VLLTE PLNP NREKM ++MFE +
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENY 131
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 135 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 233
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +1
Query: 493 NIQHAPMYVAIQAVLSLYAFRSYHPVSCWTPATVSSTPVPIYQGYALPHAILRLDL 660
N Q +Y+AIQAVL+LYA V + V+ P+Y+G+ALPH RLD+
Sbjct: 130 NYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHI-CPVYEGFALPHLTRRLDI 184
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 68.1 bits (159), Expect = 6e-12
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = +2
Query: 368 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 502
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFN 2173
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 242
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = +1
Query: 511 MYVAIQAVLSLYAFRSYHPVSCWTPATVSSTPVPIYQGYALPHAILRLDL 660
MYVA+QAV++LYA VS T VP+Y GY LPHA R+DL
Sbjct: 2177 MYVAVQAVMALYASGRTTGTVFDCGDGVSHT-VPVYDGYWLPHATQRIDL 2225
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 242
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/55 (45%), Positives = 32/55 (58%)
Frame = +2
Query: 269 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 433
D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 283 DFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/59 (37%), Positives = 38/59 (64%)
Frame = +2
Query: 326 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 502
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYN 61
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 53.6 bits (123), Expect = 1e-07
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = +1
Query: 511 MYVAIQAVLSLYAFRSYHPVSCWTPATVSSTPVPIYQGYALPHAILRLDL 660
+YVAIQAVLSLYA V + VS VPIY+GYALPHAILRLDL
Sbjct: 11 VYVAIQAVLSLYASGRTTGVVFDSGDGVSHN-VPIYEGYALPHAILRLDL 59
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +2
Query: 416 EHPVLLTEAPLNPKANREKMTQIMFETFN 502
+HPVLLTEAPLNP+ NREK ++ FETFN
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFN 154
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = +1
Query: 511 MYVAIQAVLSLYAFRSYHPVSCWTPATVSSTPVPIYQGYALPHAILRLDL 660
+++++QAVLSLYA V VS + VPIY+G+A+PH+I+R D+
Sbjct: 158 LFISMQAVLSLYATGRTTGVVLDAGDGVSHS-VPIYEGFAMPHSIMRTDI 206
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +3
Query: 111 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLI 740
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 239 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 123
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 35.5 bits (78), Expect = 0.039
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Frame = +2
Query: 251 GRMGQKDS---YVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 412
GR G+ DS VG++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 413 EEHPVLLTEAPLNPKANRE 469
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.3 bits (75), Expect = 0.089
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 275 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 397
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 129 EVAALVVDNGSGMCKAGFAGDDAPRAV 209
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 31.1 bits (67), Expect = 0.83
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 122 AHLELVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPCS 3
A L L+KL CRC K +R + + + IP C C+
Sbjct: 1296 APLSLLKLTTCRCVKTACRRDDLCSCKANDIPCTEACLCT 1335
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2
Query: 110 LVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPC 6
L++L C C+K + KR + + Q+P C C
Sbjct: 620 LLELTTCSCEKSRCKRDDLCPCKSNQMPCTEACQC 654
>SB_12332| Best HMM Match : PI-PLC-X (HMM E-Value=0)
Length = 1038
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Frame = +1
Query: 382 YLLQ*AACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHA--PMY-VAIQAVLSLYAF 552
Y +Q P S H S + Q + D P V+++ H+ Y + Q
Sbjct: 439 YPIQYPVATPSNVNSLRHPMSSRYLIQIQSDTPSKVKSLPHSMSSRYPIQCQVATPFNVM 498
Query: 553 RSYHPVSCWTPATVSSTPVPIYQGYAL 633
HP+ TP+ V S P P+ Y +
Sbjct: 499 SLPHPMQVVTPSNVKSLPHPMLSRYPI 525
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,513,467
Number of Sequences: 59808
Number of extensions: 543208
Number of successful extensions: 1663
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1640
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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