Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0322
         (660 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.6  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   3.4  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    23   3.4  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    23   3.4  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    22   4.5  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   7.9  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   7.9  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 398  LRVAPEEHPVLLTEAPLNPKANREKM 475
            LR+ P  H V+ T   +NP  + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = -2

Query: 266 SVPYDHHALMAGPSHDRGEHGARSIISCETGLAHT 162
           + P+ HH+  A P H      A S       + HT
Sbjct: 428 ATPHHHHSHAATPHHQHSTPLAHSSYPAAIQIGHT 462


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +2

Query: 227 KAPPSGRDGRMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD 361
           K  P G  G  G+K      E   KRG++  +  ++    T +DD
Sbjct: 180 KRAPMGFYGTRGKKIILDALEELDKRGVMDFQIGLQRKKDTTFDD 224


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +2

Query: 227 KAPPSGRDGRMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD 361
           K  P G  G  G+K      E   KRG++  +  ++    T +DD
Sbjct: 180 KRAPMGFYGTRGKKIILDALEELDKRGVMDFQIGLQRKKDTTFDD 224


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -1

Query: 552 ERVQREHGLDGDVHGGVLNV 493
           +RV  ++G+ GD +GG LN+
Sbjct: 62  QRVYDKNGMTGDAYGG-LNI 80


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 71  IKRPAVTANREKQIPIAGR 15
           IK P + ANR K   IAG+
Sbjct: 284 IKLPKLAANRAKLEEIAGK 302


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 162 GMCKAGFAGD 191
           GMCK G +GD
Sbjct: 130 GMCKEGISGD 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,079
Number of Sequences: 438
Number of extensions: 4639
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)