Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0319
         (657 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    27   0.69 
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    24   3.7  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   4.9  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   6.4  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   8.5  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 26.6 bits (56), Expect = 0.69
 Identities = 20/64 (31%), Positives = 25/64 (39%)
 Frame = +2

Query: 458 ERGLQRQRAKNRLSGRWPLREPSP*SSFLGSRCRKALNRNPKGSPRFKAWPGKPANVARK 637
           E G   +   +RLSG W  RE    SS L         ++P        WP  P  V  +
Sbjct: 358 ETGQWYRNVLSRLSGSWTARERD--SSVLEVIVSTLFPQHPPVD-----WPASPGQVLER 410

Query: 638 GREE 649
           G EE
Sbjct: 411 GEEE 414


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 270 ATVGKAIGAGLFAITPAGERGMC 202
           ATVG+++ +G    TP+G  G C
Sbjct: 19  ATVGQSLNSGDPCQTPSGTAGTC 41


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 160 DWENPGVTQLNRLAAHPPFASWRNSEEARTDRLPNS 267
           +W NP  T    + AHP  +  + + EAR   LP S
Sbjct: 321 EWINPA-TFPGVVQAHPARSFKQQNNEARAHHLPRS 355


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 169 NPGVTQLNRLAAHPPFASWRNS 234
           +PG     +L+ HPP AS R+S
Sbjct: 835 HPGAQTQPQLSQHPPGASGRSS 856


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +2

Query: 128 TIHWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIAFPTVAQP 277
           T++ P    ++ G   A P L+   + PL P  ++  RP P+  PT+  P
Sbjct: 82  TMNMPPRPGMIPGMPGAPPLLMG-PNGPLPPP-MMGMRPPPMMVPTMGMP 129


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,125
Number of Sequences: 2352
Number of extensions: 15859
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)