Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0319
         (657 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201638-1|ABA27097.1|  527|Homo sapiens oxidative-stress respon...    30   8.3  
BC008726-1|AAH08726.1|  527|Homo sapiens oxidative-stress respon...    30   8.3  
AF087893-1|AAP97192.1|  295|Homo sapiens DCHT2 protein.                30   8.3  
AB029024-1|BAA83053.2|  467|Homo sapiens KIAA1101 protein protein.     30   8.3  
AB017642-1|BAA75674.1|  527|Homo sapiens oxidative-stress respon...    30   8.3  

>DQ201638-1|ABA27097.1|  527|Homo sapiens oxidative-stress
           responsive 1 protein.
          Length = 527

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 164 GKTLALPNLIALQHIPLSPAGVIAKRPAPIAFPTVAQP 277
           G  L +P  I+  H+P  PAG IA +P  ++ P  A+P
Sbjct: 379 GTLLQVPEQISA-HLP-QPAGQIATQPTQVSLPPTAEP 414


>BC008726-1|AAH08726.1|  527|Homo sapiens oxidative-stress
           responsive 1 protein.
          Length = 527

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 164 GKTLALPNLIALQHIPLSPAGVIAKRPAPIAFPTVAQP 277
           G  L +P  I+  H+P  PAG IA +P  ++ P  A+P
Sbjct: 379 GTLLQVPEQISA-HLP-QPAGQIATQPTQVSLPPTAEP 414


>AF087893-1|AAP97192.1|  295|Homo sapiens DCHT2 protein.
          Length = 295

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 164 GKTLALPNLIALQHIPLSPAGVIAKRPAPIAFPTVAQP 277
           G  L +P  I+  H+P  PAG IA +P  ++ P  A+P
Sbjct: 147 GTLLQVPEQISA-HLP-QPAGQIATQPTQVSLPPTAEP 182


>AB029024-1|BAA83053.2|  467|Homo sapiens KIAA1101 protein protein.
          Length = 467

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 164 GKTLALPNLIALQHIPLSPAGVIAKRPAPIAFPTVAQP 277
           G  L +P  I+  H+P  PAG IA +P  ++ P  A+P
Sbjct: 319 GTLLQVPEQISA-HLP-QPAGQIATQPTQVSLPPTAEP 354


>AB017642-1|BAA75674.1|  527|Homo sapiens oxidative-stress
           responsive 1 protein.
          Length = 527

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 164 GKTLALPNLIALQHIPLSPAGVIAKRPAPIAFPTVAQP 277
           G  L +P  I+  H+P  PAG IA +P  ++ P  A+P
Sbjct: 379 GTLLQVPEQISA-HLP-QPAGQIATQPTQVSLPPTAEP 414


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,644,968
Number of Sequences: 237096
Number of extensions: 2357200
Number of successful extensions: 12258
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12258
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)