Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0319
         (657 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g14040.1 68416.m01772 exopolygalacturonase / galacturan 1,4-a...    31   0.51 
At3g07850.1 68416.m00960 exopolygalacturonase / galacturan 1,4-a...    31   0.51 
At5g04320.1 68418.m00424 expressed protein                             31   0.67 
At5g57380.1 68418.m07169 fibronectin type III domain-containing ...    30   1.6  
At2g19190.1 68415.m02239 light-responsive receptor protein kinas...    30   1.6  
At3g46120.1 68416.m04991 calcineurin-like phosphoesterase family...    29   3.6  
At1g52940.1 68414.m05987 calcineurin-like phosphoesterase family...    29   3.6  
At2g18130.1 68415.m02110 purple acid phosphatase (PAP11) identic...    28   4.8  
At1g64960.1 68414.m07363 expressed protein                             27   8.3  
At1g27020.1 68414.m03294 expressed protein                             27   8.3  
At1g03080.1 68414.m00282 kinase interacting family protein simil...    27   8.3  

>At3g14040.1 68416.m01772 exopolygalacturonase / galacturan
           1,4-alpha-galacturonidase / pectinase identical to
           exopolygalacturonase [Arabidopsis thaliana] GI:311962;
           nearly identical to SP|P49063 Exopolygalacturonase clone
           GBGA483 precursor (EC 3.2.1.67) (ExoPG) (Galacturan
           1,4-alpha-galacturonidase) {Arabidopsis thaliana}
          Length = 445

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +2

Query: 500 GRWPLREPSP*SSFLGSRCRKALNRNPKGSPRFKAWPGKPANVA 631
           GR+P  +P       G   RK L +N     R K WPG P  +A
Sbjct: 293 GRYPNEQPVK-----GVTVRKCLIKNTDNGVRIKTWPGSPPGIA 331


>At3g07850.1 68416.m00960 exopolygalacturonase / galacturan
           1,4-alpha-galacturonidase / pectinase identical to
           SP|P49063 Exopolygalacturonase clone GBGA483 precursor
           (EC 3.2.1.67) (ExoPG) (Galacturan
           1,4-alpha-galacturonidase) {Arabidopsis thaliana}
          Length = 444

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +2

Query: 500 GRWPLREPSP*SSFLGSRCRKALNRNPKGSPRFKAWPGKPANVA 631
           GR+P  +P       G   RK L +N     R K WPG P  +A
Sbjct: 292 GRYPNEQPVK-----GVTVRKCLIKNTDNGVRIKTWPGSPPGIA 330


>At5g04320.1 68418.m00424 expressed protein
          Length = 419

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +2

Query: 398 RIDRDRVECCSSLEQESTIKERGLQRQRAKNRLSGRWPLREP 523
           R+  +  E C SL +   ++E  ++R+R   RLS R+ ++EP
Sbjct: 249 RLRHEEAEPCKSLHEGDEVRET-IKRRRVSLRLSARFDIQEP 289


>At5g57380.1 68418.m07169 fibronectin type III domain-containing
           protein / PHD finger protein-related contains Pfam
           profiles PF00041: Fibronectin type III domain, PF00628:
           PHD-finger
          Length = 600

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +2

Query: 404 DRDRVECCSSLEQESTIKERGLQRQRAKNRLSGR 505
           D+D  E CS+ E ES ++E  L +++A N++ GR
Sbjct: 434 DKDNTEHCSAGEVESELEEERLVKRKA-NKIDGR 466


>At2g19190.1 68415.m02239 light-responsive receptor protein kinase /
           senescence-responsive receptor-like serine/threonine
           kinase, putative (SIRK) similar to light repressible
           receptor protein kinase [Arabidopsis thaliana]
           gi|1321686|emb|CAA66376; contains Pfam profiles PF00069:
           Protein kinase domain and PF00560: Leucine Rich Repeat
          Length = 876

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 280 FRLRNCWEGDRCGPLRYYASWRKGDVLQGD 191
           +R++  W+GD C P+ Y  SW   D +Q D
Sbjct: 382 YRVKKNWQGDPCVPVDY--SWEGIDCIQSD 409


>At3g46120.1 68416.m04991 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 388

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 453 LKNVDSNVKGRKTVYQGDGHYVNHHPN 533
           L N  SN KG+  ++ GD  Y + HPN
Sbjct: 128 LYNYMSNPKGQAVLFAGDLSYADDHPN 154


>At1g52940.1 68414.m05987 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 396

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 453 LKNVDSNVKGRKTVYQGDGHYVNHHPN 533
           L N  SN KG+  ++ GD  Y + HPN
Sbjct: 136 LYNYMSNPKGQAVLFAGDLSYADDHPN 162


>At2g18130.1 68415.m02110 purple acid phosphatase (PAP11) identical
           to purple acid phosphatase (PAP11) GI:20257484 from
           [Arabidopsis thaliana]
          Length = 441

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 453 LKNVDSNVKGRKTVYQGDGHYVNHHPN 533
           L N  SN KG+  ++ GD  Y + HPN
Sbjct: 156 LYNYMSNPKGQAVLFVGDLSYADDHPN 182


>At1g64960.1 68414.m07363 expressed protein
          Length = 1168

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 551 RCRKALNRNPKGSPRF 598
           RCR  +NRNPK   RF
Sbjct: 552 RCRTLINRNPKAGARF 567


>At1g27020.1 68414.m03294 expressed protein
          Length = 308

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 163 WENPGVTQLNRLAAHPPFASW 225
           WE P  T  N+LA    FA+W
Sbjct: 163 WEKPTSTDFNQLAKESEFAAW 183


>At1g03080.1 68414.m00282 kinase interacting family protein similar to
            kinase interacting protein 1 (GI:13936326) [Petunia
            integrifolia]
          Length = 1744

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 9/32 (28%), Positives = 21/32 (65%)
 Frame = +2

Query: 392  IKRIDRDRVECCSSLEQESTIKERGLQRQRAK 487
            ++ +  + VE C +LE  ST+K+R +++ + +
Sbjct: 1340 LEGLTNELVEACKNLESRSTLKDREIEQLKGR 1371


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,692,414
Number of Sequences: 28952
Number of extensions: 322797
Number of successful extensions: 790
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)