Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0318
(692 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 174 1e-44
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 105 8e-24
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 101 1e-22
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 79 8e-16
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 52 8e-08
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 48 1e-06
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 48 1e-06
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 46 5e-06
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 46 5e-06
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.068
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 32 0.090
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.12
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 29 0.48
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 28 1.1
SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pomb... 28 1.1
SPBC530.14c |dsk1||SR protein-specific kinase Dsk1|Schizosacchar... 28 1.5
SPAC1039.07c |||4-aminobutyrate aminotransferase |Schizosaccharo... 28 1.5
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 27 1.9
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 2.6
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 2.6
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 27 3.4
SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual 27 3.4
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 26 4.5
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 5.9
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 5.9
SPAC23A1.02c |||phosphoprotein phosphatase |Schizosaccharomyces ... 26 5.9
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 7.9
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 7.9
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 25 7.9
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 7.9
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 7.9
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 7.9
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 174 bits (423), Expect = 1e-44
Identities = 90/140 (64%), Positives = 98/140 (70%)
Frame = +3
Query: 255 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 434
EIVRDIKEKLCYVALDFEQE+ TAA SSSLEKSYELPDGQVITIGNERFR PEALFQPS
Sbjct: 207 EIVRDIKEKLCYVALDFEQELQTAAQSSSLEKSYELPDGQVITIGNERFRAPEALFQPSA 266
Query: 435 LGMEACGIHETTYNSIMKCDVDIRKXXXXXXXXXXXXXXXLESPTRMQKEITSFSPHRQ* 614
LG+E GIHE TYNSIMKCDVDIRK RMQKEI + +P
Sbjct: 267 LGLENAGIHEATYNSIMKCDVDIRKDLYGNVVMSGGTTMYPGIADRMQKEIQALAPSSM- 325
Query: 615 RIKNIGSPERKVLPYGSGGI 674
++K + PERK + G I
Sbjct: 326 KVKIVAPPERKYSVWIGGSI 345
Score = 165 bits (400), Expect = 7e-42
Identities = 77/86 (89%), Positives = 83/86 (96%)
Frame = +1
Query: 1 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 180
I+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI+RLDLA
Sbjct: 122 IIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 181
Query: 181 GRDLTDYLMKILTERGYSFTTTAERK 258
GRDLTDYLMKIL ERGY+F+TTAER+
Sbjct: 182 GRDLTDYLMKILMERGYTFSTTAERE 207
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 105 bits (251), Expect = 8e-24
Identities = 47/83 (56%), Positives = 62/83 (74%)
Frame = +1
Query: 4 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 183
MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE L H + RLD+AG
Sbjct: 123 MFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVAG 182
Query: 184 RDLTDYLMKILTERGYSFTTTAE 252
RD T YL+ +L +GY+F TA+
Sbjct: 183 RDATRYLISLLLRKGYAFNRTAD 205
Score = 98.3 bits (234), Expect = 9e-22
Identities = 46/111 (41%), Positives = 67/111 (60%)
Frame = +3
Query: 255 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 434
E VR++KEKLCYV+ D E + + ++ L ++Y LPDG+VI +G+ER+ CPE LFQP
Sbjct: 207 ETVREMKEKLCYVSYDLELDHKLSEETTVLMRNYTLPDGRVIKVGSERYECPECLFQPHL 266
Query: 435 LGMEACGIHETTYNSIMKCDVDIRKXXXXXXXXXXXXXXXLESPTRMQKEI 587
+G E G+ E +++I DVDIRK P+R++KEI
Sbjct: 267 VGSEQPGLSEFIFDTIQAADVDIRKYLYRAIVLSGGSSMYAGLPSRLEKEI 317
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 101 bits (241), Expect = 1e-22
Identities = 48/125 (38%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Frame = +1
Query: 7 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 186
+ET N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI + ++ GR
Sbjct: 129 YETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGR 188
Query: 187 DLTDYLMKILTERGYSFTTTAERKSFVTSRRSC---ATSLLTSSRKWPPLHPAAPSRSLT 357
D+TDYL L + G+ ++AE++ + C A+ + W P + L
Sbjct: 189 DVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVASDFRSEIESWTEHKPQIHTYQLP 248
Query: 358 NFPTV 372
+ T+
Sbjct: 249 DNQTI 253
Score = 89.8 bits (213), Expect = 3e-19
Identities = 48/130 (36%), Positives = 65/130 (50%)
Frame = +3
Query: 255 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 434
EIVR+IKEK CYVA DF E+ + +Y+LPD Q IT+G E F PE LF P
Sbjct: 212 EIVREIKEKCCYVASDFRSEIESWTEHKPQIHTYQLPDNQTITLGTECFSAPEVLFNPEM 271
Query: 435 LGMEACGIHETTYNSIMKCDVDIRKXXXXXXXXXXXXXXXLESPTRMQKEITSFSPHRQ* 614
+G EA G+H + SI+ D+D+R R E+ + S +
Sbjct: 272 MGSEASGLHIQLFKSILLSDIDLRSTLYSNIVLSGGSTLLRGFGERFISELRAISGKKN- 330
Query: 615 RIKNIGSPER 644
++K SPER
Sbjct: 331 QVKIYASPER 340
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 78.6 bits (185), Expect = 8e-16
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 10/95 (10%)
Frame = +1
Query: 1 IMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPH 156
IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY +
Sbjct: 145 IMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGS 204
Query: 157 AILRLDLAGRDLTDYLMKILTERGY--SFTTTAER 255
+I + LAGRD+T ++ +L +R S TAER
Sbjct: 205 SIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER 239
Score = 34.7 bits (76), Expect = 0.013
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Frame = +3
Query: 270 IKEKLCYVALDFEQEMATAASSSS--LEKSYELPDGQVITI--GNERFRCPEALFQPSFL 437
IKE+ CYV D +E + L+ + E G TI G ERF PE F P
Sbjct: 240 IKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIA 299
Query: 438 GME-ACGIHETTYNSIMKCDVDIRK 509
+ + E N + +D+RK
Sbjct: 300 SSDFLTPLPELVDNVVQSSPIDVRK 324
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 52.0 bits (119), Expect = 8e-08
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Frame = +3
Query: 246 RRAEIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQ 425
++ ++ + KE + V LD + A A+S + K +E PDG G ERFR E LF
Sbjct: 248 QKRRVIEEWKESVLDV-LDTPFDEAKASSRNP--KPFEFPDGVTHKFGQERFRISEILFN 304
Query: 426 PSFLGMEAC---------GIHETTYNSIMKCDVDIR 506
PSF + G+HE Y SI+ CD ++R
Sbjct: 305 PSFSASRSAETTPPQGSVGLHELVYQSILACDSELR 340
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +2
Query: 512 LYANTVLSGGTTMYPGIADPYAKGNHKLFAPSTMKNKEHWFSREESTSVWIRGN 673
L N V++GGT++ PG+++ +L S + + S +VW G+
Sbjct: 343 LLNNIVVTGGTSLIPGLSERLQAEVQRLATGSRINVHTAETASATSNAVWFGGS 396
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 48.4 bits (110), Expect = 1e-06
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 20/95 (21%)
Frame = +3
Query: 258 IVRDIKEKLCYVALDFEQEMATAASS--SSLEKSYELPD------------------GQV 377
IV +IKE +CYV+ +F+++M S LE Y LPD QV
Sbjct: 214 IVNEIKESVCYVSQNFKEDMEICHEKPRSKLEICYALPDYSTGKHGYIVRDINQKIEQQV 273
Query: 378 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSI 482
+ + NERF PE LF PS + + GI E S+
Sbjct: 274 LNLSNERFMIPELLFSPSDIEIREAGIPEAVMQSV 308
Score = 41.1 bits (92), Expect = 1e-04
Identities = 16/49 (32%), Positives = 32/49 (65%)
Frame = +1
Query: 88 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 234
+V+DSG +H +P+ + A+ R+D+ G+ LT+YL ++++ R Y+
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYN 207
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 48.0 bits (109), Expect = 1e-06
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +1
Query: 1 IMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 174
++FE +N P++ I + S Y + + ++GIVL+ G+ SH +P+ G + R+
Sbjct: 137 LLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRIS 196
Query: 175 LAGRDLTDYLMKILTERGYSF 237
G + YL+K+ + SF
Sbjct: 197 WGGSQSSSYLLKLFQIKYPSF 217
Score = 33.9 bits (74), Expect = 0.022
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +3
Query: 393 ERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKXXXXXXXXXXXXXXXLESPTR 572
E+ R PE +F PS +G++ GI E + + + ++ ++ TR
Sbjct: 594 EQIRVPEVIFSPSIVGIDQAGILEIMRSILQRHSLEEQQKLVSNVLITGGLGSLPGMETR 653
Query: 573 MQKEITSFSP 602
+++E+TS P
Sbjct: 654 IKRELTSIMP 663
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 46.0 bits (104), Expect = 5e-06
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = +1
Query: 7 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 186
FE P +A + ++ LYA G G+V+D G + PI +G + A +L L GR
Sbjct: 170 FEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGR 229
Query: 187 DLTDYLMKILTE 222
+T +L +L E
Sbjct: 230 YMTQHLQNLLRE 241
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 46.0 bits (104), Expect = 5e-06
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +1
Query: 4 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 183
MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L +G
Sbjct: 121 MFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSG 180
Query: 184 RDLTDYLMKILTERGY 231
+ D L + L ++ +
Sbjct: 181 NAINDILAQTLRDKNF 196
Score = 33.1 bits (72), Expect(2) = 3e-04
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 324 AASSSSLEKSYELPDGQVITIGNERFRCPEALFQP 428
++ ++ E +E PDG + G ER++ PE LF P
Sbjct: 254 SSETTIAESEFEFPDGSRMMFGAERYQIPEHLFVP 288
Score = 26.2 bits (55), Expect(2) = 3e-04
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Frame = +3
Query: 453 GIHETTYNSIMKCDVDIRKXXXXXXXXXXXXXXXLESPTRMQKEITSFSPHRQ*RIKNIG 632
GI + N I +CDVDIR R+Q E++ P + +I G
Sbjct: 326 GIPQLFQNCISECDVDIRASLLNNVIVCGGTSLMQGFSLRLQNELSKLYPGSRLKIHASG 385
Query: 633 S-PERKVLPYGSGGI-ESLG 686
ER + G I SLG
Sbjct: 386 HVVERSYASWLGGSILSSLG 405
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.068
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2
Query: 29 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 163
P T+P P T PV P S P+ P P PS++ P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +2
Query: 26 PPCTSPSKPCSRCTRPVVPPVSCWTP-----ATVSPTPCPSTKDTHSPTPS 163
PP +P P P VPP S P A + P P P+ K P PS
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243
Score = 26.6 bits (56), Expect = 3.4
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +2
Query: 26 PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTKDTHSPTPS 163
PP PS +P VPPV P+ P P PS P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +2
Query: 26 PPCTSPSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPS 163
PP +PS +P VPPV P+ P P PS P PS
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPS 1214
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 31.9 bits (69), Expect = 0.090
Identities = 15/79 (18%), Positives = 39/79 (49%)
Frame = +1
Query: 1 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 180
I+F + + +++ + + +G + V+D G + + EG +P++ ++++
Sbjct: 265 ILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNSRIKINYG 324
Query: 181 GRDLTDYLMKILTERGYSF 237
G D+T MK+L + +
Sbjct: 325 GDDITLLFMKLLMRSHFPY 343
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.5 bits (68), Expect = 0.12
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 2 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 163
SC+ ++ PP T S S P VPP S T + PT ST SP P+
Sbjct: 171 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
Score = 30.3 bits (65), Expect = 0.28
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 2 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 163
SC+ ++ PP T S S P VPP S T + PT ST +P P+
Sbjct: 114 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 2 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 163
SC+ ++ P T S S P VPP S T + PT ST SP P+
Sbjct: 228 SCTTSTSIP--TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 2 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTKDTHSPTP 160
SC+ ++ PP + + P + P VPP S TP T T C ST ++ TP
Sbjct: 392 SCTTSTSIPPTGNSTTPVT----PTVPPTSSSTPLTT--TNCTTSTSVPYTSTP 439
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +2
Query: 2 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 163
S S ST PP S S + + + SC T ++ PT +T T + P+
Sbjct: 363 STSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPT 416
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 29.5 bits (63), Expect = 0.48
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 50 PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 154
PC+ + PPV+C TP P C K H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 259 SFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNP 429
+F +R S A SS + P +P+AP+R PTV++S S A+ ++ P
Sbjct: 335 AFTANRFSPAAPTTVSSERNAPPYPSAPTRPTP--PTVQTSSSAAPVDSAEPVAYQP 389
>SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 990
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -1
Query: 368 VGKFVRLLEGAAGCSGGHFLLEVKSDVAQLLLDVTNDFRSAVV 240
+GK RLLE AAG F+ KSD+ D N RS ++
Sbjct: 853 LGKPERLLESAAGQFIISFITSEKSDLLNTHTDFVNAIRSPLI 895
>SPBC530.14c |dsk1||SR protein-specific kinase
Dsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.9 bits (59), Expect = 1.5
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +1
Query: 184 RDLTDYLMKI-LTERGYSFTTTA-ERKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRS-L 354
R+ T Y K + +RG S +A ERK+F A + +S+ + P++P S L
Sbjct: 251 RNNTGYTAKAPIIKRGQSVDNSAQERKTF-------AKNPTKNSKPAGQVIPSSPFTSTL 303
Query: 355 TNFPTVRSSLSETKDSVAQRLSSNPRS 435
+ FP++ ++SE +Q+ +S+P S
Sbjct: 304 SRFPSLEGAVSEISLRDSQKHNSHPNS 330
>SPAC1039.07c |||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -3
Query: 678 IRFPRIHTEVLSSLENQCSLFFIVDGAKSL*FPFA---YGSAIPGYMVVPPDNTVLA 517
+R +++T + S + GA SL F A YG A+PG +P N L+
Sbjct: 126 LRMAKVYTNKYECVAFSSSWHGVTGGAASLTFAAARRGYGPALPGSYTIPEPNPKLS 182
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 198 LPHEDPHRARLLVHYHRRAEIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 365
LP P R + L Y E++R+ EKL AL E++ + SL+++ P
Sbjct: 315 LPENHPQRRQTLEFYEIEIEVLREKVEKL--QALSDEKDFYISKLEKSLDRNDTTP 368
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 50 PCSRCTRPVVPPVSCWTPATVSPTPCPST 136
P SR T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 26 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 133
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 26.6 bits (56), Expect = 3.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 617 NKEHWFSREESTSVWIRGNRIPWPS 691
N E+W REE+ + G WP+
Sbjct: 1281 NNEYWKIREEAGEAHLAGKEFEWPN 1305
>SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 186 RPHRLPHEDPHRARLLVHYHRRAEIVRDIKEKLCYVALDFEQE 314
RP + P DPH + L Y + +++ KE LD +++
Sbjct: 263 RPQKPPQIDPHSSSLADEYRESNKRLQESKESCARFILDCDRK 305
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +3
Query: 66 RVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPH 218
R RS HR+ G RR P+R HL R RH + R R H
Sbjct: 142 RTRSNHRH--GSHRRHEPYRTHLSRHH---RHSTTNYHSKRDDRYERRREH 187
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.8 bits (54), Expect = 5.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 572 YAKGNHKLFAPSTMKNK 622
YAKG+ ++FA S+MK K
Sbjct: 258 YAKGSFQMFATSSMKTK 274
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 25.8 bits (54), Expect = 5.9
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 214 LTERGYSFTTTAERKSFVTSRRSCATSLLTSSRK-WPPLH-PAAPSRSLTN 360
+ E GY+FTT +R TSR L+ S K P +H P+ S S T+
Sbjct: 7 IRETGYNFTTILKRLEAATSR---LEDLVESGHKPLPNMHRPSRDSNSQTH 54
>SPAC23A1.02c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 430
Score = 25.8 bits (54), Expect = 5.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 557 GIADPYAKGNHKLFAPSTMK 616
G+ADP +GNHK+ A K
Sbjct: 55 GVADPQIEGNHKIEANGFFK 74
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 202 LMKILTERGYSFTTTAERKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNF 363
L K+L E S ++ + S + +S TSSRK+ + + S LT+F
Sbjct: 713 LRKLLEEADTSSNFSSSNNHVLDSSKHTVSSASTSSRKFIENYKSLESIGLTSF 766
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 319 PPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS 483
PP+ +PS SL P S + + S R ++ +S + K + P T S
Sbjct: 217 PPIEEYSPSVSLPTSPVAEESYNNVQRSSTVRNNTTQKSVLKKPSRKMSPAYTSS 271
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -1
Query: 383 SDDLTVGKFVRLLEGAAGCSGGHFLLEVKSDVAQLLL 273
+D VG+ L+ GAAG S GHF EV + + +LL
Sbjct: 350 ADSTFVGRAASLV-GAAGQSQGHF-TEVLNGIGTILL 384
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.4 bits (53), Expect = 7.9
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +1
Query: 232 SFTTTAERKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSVA- 408
S TT++ S T+ + AT TSS L A S S T+ SSL+ T + A
Sbjct: 152 SSTTSSSLASSSTNSTTSATP--TSSATSSSLSSTAASNSATSSSLASSSLNSTTSATAT 209
Query: 409 -QRLSSNPRSWVWKLAASTRPHITPS*SATWTS 504
LSS S ++ + + SAT TS
Sbjct: 210 SSSLSSTAASNSATSSSLASSSLNSTTSATATS 242
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.4 bits (53), Expect = 7.9
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = +2
Query: 44 SKPCSRCTRPVVPPVSCWT---PATVSPTPCPSTKDTHSPTPSCVWT*PV 184
S+ S T P PP + T PA SP P + H PT S PV
Sbjct: 899 SRTSSVSTLPPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPV 948
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 7.9
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 238 TTTAERKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNF--PTVRSSLSETK-DSVA 408
+ TA +S +T+ + ATSL SS + ++ + T+F PTV S+ S + S+A
Sbjct: 775 SATASSQSQLTNSSTLATSLYLSSSSSRTISTSSTNEYNTSFHAPTVSSTTSSSSTTSLA 834
Query: 409 QRLSSNPRS 435
N S
Sbjct: 835 ANKGVNSNS 843
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,225,224
Number of Sequences: 5004
Number of extensions: 72107
Number of successful extensions: 352
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 339
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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