Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0318
(692 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 191 4e-49
SB_56| Best HMM Match : Actin (HMM E-Value=0) 191 4e-49
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 189 2e-48
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 3e-48
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 2e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 2e-47
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 167 1e-41
SB_54| Best HMM Match : Actin (HMM E-Value=0) 140 1e-33
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 124 7e-29
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 121 5e-28
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 2e-26
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 66 3e-11
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 59 3e-09
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 59 3e-09
SB_30755| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.054
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.095
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.095
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 32 0.38
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 32 0.38
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 32 0.51
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 32 0.51
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 31 1.2
SB_7216| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 1.5
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.5
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 2.0
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.0
SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1) 29 3.6
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 3.6
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 29 4.7
SB_25899| Best HMM Match : Ribonuc_2-5A (HMM E-Value=0) 29 4.7
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 29 4.7
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 4.7
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 4.7
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 4.7
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 29 4.7
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 29 4.7
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 4.7
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 6.2
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 6.2
SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21) 28 6.2
SB_7984| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 28 6.2
SB_8145| Best HMM Match : RNA_pol_Rpb2_6 (HMM E-Value=0) 28 6.2
SB_53874| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94) 28 8.3
SB_41475| Best HMM Match : HSA (HMM E-Value=7.5) 28 8.3
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 28 8.3
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 28 8.3
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 28 8.3
SB_12796| Best HMM Match : Radical_SAM (HMM E-Value=8.9e-24) 28 8.3
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 8.3
SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12) 28 8.3
SB_41315| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 8.3
SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4) 28 8.3
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 191 bits (466), Expect = 4e-49
Identities = 99/140 (70%), Positives = 104/140 (74%)
Frame = +3
Query: 255 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 434
EIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSF 267
Query: 435 LGMEACGIHETTYNSIMKCDVDIRKXXXXXXXXXXXXXXXLESPTRMQKEITSFSPHRQ* 614
LGME+ GIHETTYNSIMKCDVDIRK RMQKEITS +P
Sbjct: 268 LGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTM- 326
Query: 615 RIKNIGSPERKVLPYGSGGI 674
+IK I PERK + G I
Sbjct: 327 KIKIIAPPERKYSVWIGGSI 346
Score = 173 bits (421), Expect = 1e-43
Identities = 81/86 (94%), Positives = 86/86 (100%)
Frame = +1
Query: 1 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 180
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLA 182
Query: 181 GRDLTDYLMKILTERGYSFTTTAERK 258
GRDLTDYLMKILTERGYSFTTTAER+
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAERE 208
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 191 bits (466), Expect = 4e-49
Identities = 99/140 (70%), Positives = 104/140 (74%)
Frame = +3
Query: 255 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 434
EIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSF
Sbjct: 207 EIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSF 266
Query: 435 LGMEACGIHETTYNSIMKCDVDIRKXXXXXXXXXXXXXXXLESPTRMQKEITSFSPHRQ* 614
LGME+ GIHETTYNSIMKCDVDIRK RMQKEITS +P
Sbjct: 267 LGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTM- 325
Query: 615 RIKNIGSPERKVLPYGSGGI 674
+IK I PERK + G I
Sbjct: 326 KIKIIAPPERKYSVWIGGSI 345
Score = 174 bits (423), Expect = 6e-44
Identities = 82/86 (95%), Positives = 86/86 (100%)
Frame = +1
Query: 1 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 180
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 181 GRDLTDYLMKILTERGYSFTTTAERK 258
GRDLTDYLMKILTERGYSFTTTAER+
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAERE 207
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 189 bits (460), Expect = 2e-48
Identities = 97/140 (69%), Positives = 104/140 (74%)
Frame = +3
Query: 255 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 434
EIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSF 267
Query: 435 LGMEACGIHETTYNSIMKCDVDIRKXXXXXXXXXXXXXXXLESPTRMQKEITSFSPHRQ* 614
LGME+ GIHETTYNSIMKCDVDIRK RMQKEI++ +P
Sbjct: 268 LGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTM- 326
Query: 615 RIKNIGSPERKVLPYGSGGI 674
+IK I PERK + G I
Sbjct: 327 KIKIIAPPERKYSVWIGGSI 346
Score = 174 bits (423), Expect = 6e-44
Identities = 82/86 (95%), Positives = 86/86 (100%)
Frame = +1
Query: 1 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 180
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 181 GRDLTDYLMKILTERGYSFTTTAERK 258
GRDLTDYLMKILTERGYSFTTTAER+
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAERE 208
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 188 bits (459), Expect = 3e-48
Identities = 97/140 (69%), Positives = 104/140 (74%)
Frame = +3
Query: 255 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 434
EIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSF
Sbjct: 170 EIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSF 229
Query: 435 LGMEACGIHETTYNSIMKCDVDIRKXXXXXXXXXXXXXXXLESPTRMQKEITSFSPHRQ* 614
LGME+ GIHETTYNSIMKCDVDIRK RMQKEI++ +P
Sbjct: 230 LGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTM- 288
Query: 615 RIKNIGSPERKVLPYGSGGI 674
+IK I PERK + G I
Sbjct: 289 KIKIIAPPERKYSVWIGGSI 308
Score = 173 bits (421), Expect = 1e-43
Identities = 81/86 (94%), Positives = 86/86 (100%)
Frame = +1
Query: 1 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 180
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLA
Sbjct: 85 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLA 144
Query: 181 GRDLTDYLMKILTERGYSFTTTAERK 258
GRDLTDYLMKILTERGYSFTTTAER+
Sbjct: 145 GRDLTDYLMKILTERGYSFTTTAERE 170
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 186 bits (453), Expect = 2e-47
Identities = 96/140 (68%), Positives = 103/140 (73%)
Frame = +3
Query: 255 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 434
EIVRDIKEKLCYVALDFEQEM TAASSSS+EKSYELPDGQVITIGNERFRCPEAL QPSF
Sbjct: 181 EIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSF 240
Query: 435 LGMEACGIHETTYNSIMKCDVDIRKXXXXXXXXXXXXXXXLESPTRMQKEITSFSPHRQ* 614
LGME+ GIHETTYNSIMKCDVDIRK RMQKEI++ +P
Sbjct: 241 LGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTM- 299
Query: 615 RIKNIGSPERKVLPYGSGGI 674
+IK I PERK + G I
Sbjct: 300 KIKIIAPPERKYSVWIGGSI 319
Score = 96.3 bits (229), Expect = 2e-20
Identities = 54/93 (58%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Frame = +1
Query: 1 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYALPHAILRLD 174
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+ R
Sbjct: 123 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYSFTTTAEREI 182
Query: 175 LAGRDLTDYLMKILTERGYSFTTTAERKSFVTS 273
+ RD+ + L + + T A S S
Sbjct: 183 V--RDIKEKLCYVALDFEQEMQTAASSSSIEKS 213
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 186 bits (452), Expect = 2e-47
Identities = 96/140 (68%), Positives = 104/140 (74%)
Frame = +3
Query: 255 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 434
EIVRDIKEKL YVALDFEQEMATAA+SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSF
Sbjct: 207 EIVRDIKEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSF 266
Query: 435 LGMEACGIHETTYNSIMKCDVDIRKXXXXXXXXXXXXXXXLESPTRMQKEITSFSPHRQ* 614
LGME+ GIHETTYNSIMKCDVDIRK RMQKEI++ +P
Sbjct: 267 LGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTM- 325
Query: 615 RIKNIGSPERKVLPYGSGGI 674
+IK I PERK + G I
Sbjct: 326 KIKIIAPPERKYSVWIGGSI 345
Score = 174 bits (423), Expect = 6e-44
Identities = 82/86 (95%), Positives = 86/86 (100%)
Frame = +1
Query: 1 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 180
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 181 GRDLTDYLMKILTERGYSFTTTAERK 258
GRDLTDYLMKILTERGYSFTTTAER+
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAERE 207
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 167 bits (405), Expect = 1e-41
Identities = 77/86 (89%), Positives = 83/86 (96%)
Frame = +1
Query: 1 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 180
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 181 GRDLTDYLMKILTERGYSFTTTAERK 258
GRDLTDYLMK++TERGYSFTTTAER+
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAERE 86
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +3
Query: 255 EIVRDIKEKLCYVALDFEQEM 317
EIVRDIKEKLCYVALDF QE+
Sbjct: 86 EIVRDIKEKLCYVALDFYQEI 106
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 140 bits (339), Expect = 1e-33
Identities = 61/86 (70%), Positives = 75/86 (87%)
Frame = +1
Query: 1 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 180
+MFE+FN P MYVA+QAV++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLA
Sbjct: 2167 LMFESFNVPCMYVAVQAVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLA 2226
Query: 181 GRDLTDYLMKILTERGYSFTTTAERK 258
GRDLT YL +++TERGYSF +TAE++
Sbjct: 2227 GRDLTHYLQRLVTERGYSFQSTAEQQ 2252
Score = 107 bits (257), Expect = 8e-24
Identities = 47/84 (55%), Positives = 61/84 (72%)
Frame = +3
Query: 255 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 434
+I+RD+KE LCY A+D+E+E+ A +S E Y LPDGQ I IG+ERFR E LFQPS
Sbjct: 2252 QIIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSL 2311
Query: 435 LGMEACGIHETTYNSIMKCDVDIR 506
LG + GIHE+ + SI KCD+D+R
Sbjct: 2312 LGRDIDGIHESIFKSIKKCDIDLR 2335
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 124 bits (299), Expect = 7e-29
Identities = 51/84 (60%), Positives = 74/84 (88%)
Frame = +1
Query: 1 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 180
+ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+A
Sbjct: 148 VFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIA 207
Query: 181 GRDLTDYLMKILTERGYSFTTTAE 252
GRD++ YL +L + G+ F +++E
Sbjct: 208 GRDVSRYLRLLLRKEGHCFHSSSE 231
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/81 (29%), Positives = 38/81 (46%)
Frame = +2
Query: 317 GHRCIQQLPREVLRTSRRSGHHYRKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRR 496
GH E++RT + +++ LP GS+ VL + + D +RR
Sbjct: 223 GHCFHSSSELEIVRTIKEESMESERQQYALPDGSIIE-VLAFAIQKSDLD-------LRR 274
Query: 497 GHP*DLYANTVLSGGTTMYPG 559
LY+N VLSGG+T++ G
Sbjct: 275 V----LYSNIVLSGGSTLFKG 291
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 121 bits (292), Expect = 5e-28
Identities = 64/116 (55%), Positives = 74/116 (63%)
Frame = +3
Query: 327 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIR 506
A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 507 KXXXXXXXXXXXXXXXLESPTRMQKEITSFSPHRQ*RIKNIGSPERKVLPYGSGGI 674
K RMQKEI + + ++K I PERK + G I
Sbjct: 65 KDLYSNCVLSGGSTMFPGIADRMQKEIAMLA-NASMKVKVIAPPERKYSVWIGGSI 119
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 116 bits (278), Expect = 2e-26
Identities = 49/84 (58%), Positives = 66/84 (78%)
Frame = +1
Query: 1 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 180
+MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+A
Sbjct: 126 VMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIA 185
Query: 181 GRDLTDYLMKILTERGYSFTTTAE 252
GRD+T YL+K++ RGY+F TA+
Sbjct: 186 GRDITKYLIKLMLLRGYAFNHTAD 209
Score = 90.6 bits (215), Expect = 1e-18
Identities = 43/111 (38%), Positives = 61/111 (54%)
Frame = +3
Query: 255 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 434
E VR +KEKLCYV + EQE A ++ L + Y LPDG+V+ + ERF PEALFQP
Sbjct: 211 ETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHL 270
Query: 435 LGMEACGIHETTYNSIMKCDVDIRKXXXXXXXXXXXXXXXLESPTRMQKEI 587
+ +E G+ E +N+I D+D R P+R+++EI
Sbjct: 271 INVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREI 321
Score = 31.5 bits (68), Expect = 0.67
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 509 DLYANTVLSGGTTMYPGIADPYAKGNHKLFAPSTMK 616
+ Y + VLSGG+TMYPG+ + +L+ +K
Sbjct: 296 EFYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLK 331
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 65.7 bits (153), Expect = 3e-11
Identities = 29/74 (39%), Positives = 48/74 (64%)
Frame = +1
Query: 1 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 180
+MFE +N PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LA
Sbjct: 55 LMFEKYNVPAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLA 114
Query: 181 GRDLTDYLMKILTE 222
G +T ++ E
Sbjct: 115 GDFITAQCRQMFEE 128
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = +3
Query: 255 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 434
+IV DIKEK+CY++ D +E+ ++ L K Y LPDGQ+I+IG E E LF+P
Sbjct: 838 QIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECISSMEPLFRPDL 897
Query: 435 L 437
L
Sbjct: 898 L 898
Score = 58.4 bits (135), Expect = 5e-09
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +1
Query: 46 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 222
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 223 RGYSFTTTA 249
RG++FT+++
Sbjct: 827 RGHNFTSSS 835
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 13 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 189
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 190 LTDYLMKILTER 225
+T ++ ++L ER
Sbjct: 98 ITFFVQQLLRER 109
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 378 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRK 509
+ + ERF PE F P F + + E N I C +D+R+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRR 240
>SB_30755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 906
Score = 36.3 bits (80), Expect = 0.024
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = +1
Query: 286 ATSLLTSSRKWPPL--HPAAPSRSLTNFP---TVRSSLSETKDSVAQRLSSNPRSWVWKL 450
+TS +T S K+PP+ +PA PS L P TV SLS T S+P S V L
Sbjct: 452 STSSITGSSKYPPVSPNPAKPSNILFEGPSSSTVFKSLSPTDQMSNSPSQSSPGSSVSDL 511
Query: 451 AASTRPHI 474
+ S+ P++
Sbjct: 512 SCSSDPNV 519
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 35.1 bits (77), Expect = 0.054
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 26 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 163
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 5 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTKDTHSPTPSC 166
CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1521 CSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 26 PPCTSPSKPCSRCTRPVVPPVSC 94
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 34.3 bits (75), Expect = 0.095
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 26 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 163
P TSP + P +R P+ PP C + V PTP S+K + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.095
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 14 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 127
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 29 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 127
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 33.9 bits (74), Expect = 0.13
Identities = 30/82 (36%), Positives = 35/82 (42%)
Frame = +3
Query: 36 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDP 215
RR S A R RS R R+ RRR RR R+P H S SRSR R P
Sbjct: 211 RRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRH 269
Query: 216 HRARLLVHYHRRAEIVRDIKEK 281
R+R H R+ K+K
Sbjct: 270 SRSRSPTHRRHRSRSHSPEKKK 291
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 33.5 bits (73), Expect = 0.17
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 14 HSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 163
HST ++PS P + CT P P P + TP+T S PST T S TPS
Sbjct: 63 HSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 5 CSKHSTRPPCT--SPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTKDTHSPTPS 163
C+ + P T +PS P + CT P + TP+T S TPC PST T S TPS
Sbjct: 40 CTPSTPSTPSTPITPSTPSTPCTHST--PSAPSTPSTPS-TPCTPSTPSTPS-TPS 91
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +2
Query: 11 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSP--TPS 163
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +2
Query: 35 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSPTP 160
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 8 SKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 163
S ST +PS P + CT P P P + TP+T S TPC + + TPS
Sbjct: 22 STPSTPSTPRTPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPS 73
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = +2
Query: 8 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 163
S STR ++PS P + T P P TP+T S T PST T S TPS
Sbjct: 644 STPSTRSTPSTPSTPSTPST-PSTPS----TPSTPSLTHTPSTPSTPS-TPS 689
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Frame = +2
Query: 29 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 154
P T PC + CT+ +P +TP T TPC PST+ +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +2
Query: 5 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 127
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +2
Query: 29 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 127
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 26 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 163
P SP+ P P P + TP T +PT TK T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 20 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 163
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 26 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTKDTHSPTPS 163
P +P+KP P + TP T SPT P +T +PTP+
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 17 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 157
+T P T K + T + P TP PTP T T +PT
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +2
Query: 20 TRP-PCTSPS--KPCSRCTRPVVPPVSCWTPATVSP-TPCPS--TKDTHSPT 157
T+P P T+P+ KP P P + TP +P TP P+ T H+PT
Sbjct: 92 TKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 20 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP-TPS 163
T+P T+P+ T P S P +PTP T T +P TP+
Sbjct: 37 TKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPT 85
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 26 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 121
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 82 TGIVLDSGDGVSHTVPI 132
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 35 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 163
T+P+ P + T P P + TP T + TP +P P+
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 23 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHS 151
+PP T+PSK T P+ P++ TP T T +TK T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 408 PEALFQPSFLGMEACGIHET 467
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 31.9 bits (69), Expect = 0.51
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = +1
Query: 1 IMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 162
I+FE +N A+ A LS Y S +V+D+G +H VP++ G + A+
Sbjct: 324 ILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAV 383
Query: 163 LR 168
R
Sbjct: 384 RR 385
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +3
Query: 225 RLLVHYHRRAEIVRDIKEKLCYVALDFEQEMATA---ASSSSLEKSYELPD 368
R +H ++ +KE CYV+ F ++M A +++ + Y LPD
Sbjct: 384 RRQLHVLDETFVINQVKEDTCYVSSQFYKDMEIARQRGKENTIVREYVLPD 434
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 14 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTP 160
H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
>SB_7216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1400
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Frame = +3
Query: 123 RAHLRRIRTPPRHPASGLSRS---RPHRLPHEDPHRARLLVHYHRRAEIVR----DI-KE 278
R LRR+R P S S P +P E+P + H + E VR D+ ++
Sbjct: 478 RKQLRRVRPLDNEPGSVREASWKDEPEPVPEEEPDVDLVFRDPHLQVEKVRLNVQDVTRD 537
Query: 279 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 383
+ +D E+E+ + S +E S PD Q I+
Sbjct: 538 EARAKPIDEEEELTEEETGSIIEHSSPEPDSQDIS 572
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 35 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTK 139
+SP KP T+PVVP P+ + P P PS+K
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = -1
Query: 182 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 45
P+ + +W P T W +PSP+ T P ++T+W
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSW 138
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -1
Query: 182 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 45
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -1
Query: 182 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 45
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 14 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 163
H RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 17 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 163
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 137 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 14 HSTRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 163
++T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 66 NTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPT 118
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +2
Query: 17 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPT-PCPSTKD-THSPTPSCVWT*P 181
+T P T+P+KP + T P + PAT +PT P +T T +PT S T P
Sbjct: 123 TTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPP 182
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 17 STRPPC-TSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 163
+T PP T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 52 TTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 17 STRPPCTSPSKPCSRC---TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 163
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 109 TTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 160
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 41 PSKPCSRCTRPVVPP 85
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +2
Query: 26 PPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTKDTHSPTP 160
PP T P+ P S P VP + P V+P P + PTP
Sbjct: 332 PPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +2
Query: 29 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 127
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 29 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 133
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 29.5 bits (63), Expect = 2.7
Identities = 31/100 (31%), Positives = 37/100 (37%)
Frame = +3
Query: 6 VRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRS 185
V + A + +P R H R L RR R H RR R R P L R
Sbjct: 140 VHGAREACAIGPYPLSRRHTRRPRLHTRRPRLHRRRT--RLHTRRPRLHTRRPR--LHRR 195
Query: 186 RPHRLPHEDPHRARLLVHYHRRAEIVRDIKEKLCYVALDF 305
RP RL P R R HR D+ +V LD+
Sbjct: 196 RP-RLHTRRPRRHRRRPRLHRHDLDYTDVDLDYTHVDLDY 234
>SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1)
Length = 329
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 338 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 424
LPR ++R HY++ +PLPRG P
Sbjct: 132 LPRGGSPLTKRRESHYQEEGVPLPRGGSP 160
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 338 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 424
LPR ++R HY++ +PLPRG P
Sbjct: 154 LPRGGSPLTKRRESHYQEEGVPLPRGGGP 182
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 62 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 163
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +2
Query: 11 KHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPCPSTKDTHSPTP 160
KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 205 KHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 280 SCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSV 405
SCA S+ + L PA+P+ S++ F T++ T+ S+
Sbjct: 970 SCAEPRSIDSKHYTALSPASPASSISCFSTLQLKQMPTRSSI 1011
>SB_25899| Best HMM Match : Ribonuc_2-5A (HMM E-Value=0)
Length = 603
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 344 REVLRTSRRSGHHYRKRKIPLPR--GSLPTLVLGYGSLRHPR 463
R++LR R HHYR+ + R G++P + Y + R PR
Sbjct: 521 RDLLRALRNKKHHYRELPDEVKRSLGTIPDEYVRYFTSRFPR 562
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 23 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 160
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 376 SSLSETKDSVAQRLSSNPRSWVWK 447
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +2
Query: 35 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 172
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 65 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 169
T VVPP+ P V P+P + + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 273 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 413
+EK+ L+ E E A ++ LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +2
Query: 41 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PV 184
PS P S PV V T T +PT C T + P+C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 11 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 163
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 15 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRC---LPHRAHLRRIRT-PPRHPASGLSR 182
I H++ RH S+ L R R HR + RR + H ++L R R P ++ +
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRPRNWVPPFNSTAMIF 1647
Query: 183 SRPH 194
+PH
Sbjct: 1648 GKPH 1651
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 38 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 160
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 62 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 181
CT P ++ P T + T P TK P PS + T P
Sbjct: 150 CTGTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPP 189
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 117 PHRAHLRRIRTPPR-HPASGLSRSRPHRLPHEDPH 218
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21)
Length = 226
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 5 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS--CWTPATVSPTPCPSTKDTHSPT 157
C +H T K C C + PP+ T T +PT P TK T +PT
Sbjct: 167 CRRHKTYMNIYC-RKSCGFCGKAPHPPIQEPPVTKTTTAPTEPPVTKTTTAPT 218
>SB_7984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 608 TMKNKEHWFSREESTSVWIRGNRIPW 685
T+KN EHW R + T + IPW
Sbjct: 271 TVKNNEHWLQRADWTGLNESLKNIPW 296
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 2 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPAT-VSPTPCPSTKDTHSPTPS 163
+C+ T P +P+ + T P + +TP T +PTP + +++PTPS
Sbjct: 39 TCTTSYTPTPSYTPTPSYTPTTS--YTPTTSYTPTTSYTPTPSYTPTTSYTPTPS 91
>SB_8145| Best HMM Match : RNA_pol_Rpb2_6 (HMM E-Value=0)
Length = 893
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 374 LTVGKFVRLLEGAAGCSGGHF 312
+TVGK + L+ G AG GHF
Sbjct: 366 MTVGKLIELIAGKAGVLEGHF 386
>SB_53874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 328 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 474
HP SR +N P V S + V R+ SN V+ S +PH+
Sbjct: 113 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNQPHV 160
>SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94)
Length = 592
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = +3
Query: 18 QHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPH 194
Q RRHP R R+ + G+R R P +RR RT R + R R H
Sbjct: 356 QRGERERRHPPGVAICRYRTRQVSQRGVRERRNPPGVAIRRYRT--RQVSQRGERERRH 412
>SB_41475| Best HMM Match : HSA (HMM E-Value=7.5)
Length = 195
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/76 (25%), Positives = 25/76 (32%)
Frame = +3
Query: 3 HVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSR 182
H + R H R RVR H YR HR H R+ + +
Sbjct: 119 HEYRVHRVHEYRVH--RVHEYRVRRVHEYRVHRVHEYRVHRVHEYRVHRVHEYRVHRVHE 176
Query: 183 SRPHRLPHEDPHRARL 230
R HR+ HR +
Sbjct: 177 YRVHRVHEYRVHRVHV 192
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = -1
Query: 470 CGLVDAASFHTQERGL-EESLWATESFVSDSDDLTVGKFVRLLEGAAGCSGGHFLLEVKS 294
C LV A + R L +SLW + SFV + + + LLE C G+ +K
Sbjct: 1998 CNLVAAYVCLLRARDLARKSLWGSSSFVKEKTESLLVLVKHLLEVCVLCRCGN----LKE 2053
Query: 293 DVAQLLLDVTNDFRSAV 243
D+++L+ D V
Sbjct: 2054 DLSKLMKSEEGDMADEV 2070
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 8 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTK 139
S+ ST+ P T KP + RP+ P + P + P P T+
Sbjct: 252 SQVSTKQPATERPKPRTEKPRPITQPPTTQRPRPKTRRPEPRTE 295
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 11 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 166
KH T PP S + P P+S TP+ SP S+ +HS +C
Sbjct: 2062 KHHT-PPSAHSYGTSSYDSSPQKLPISYLTPSPESPKDWSSSPSSHSDWSNC 2112
>SB_12796| Best HMM Match : Radical_SAM (HMM E-Value=8.9e-24)
Length = 676
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 328 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHI 474
HP SR +N P V S + V R+ SN V+ S +PH+
Sbjct: 615 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNQPHV 662
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 26 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 124
PP +P+ P T P VPP + P T P P
Sbjct: 227 PPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKP 259
>SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12)
Length = 575
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +2
Query: 26 PPCTSPSKPCSRCTRPVVPPVSCWTP-ATVSPTPCPSTKDTHSPT 157
PP T+P P P + T AT PT P+T T PT
Sbjct: 1 PPVTTPVPTTESTAVPTTAPTTEQTTVATTIPTTIPTTVPTTEPT 45
>SB_41315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1761
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 238 TTTAERKSFVTSRRSCATSLLTSSRKWPP--LHPAAPSRSLTNFPTVRSS 381
T TA+ K+ T T TS+ PP LHP AP+ T +P R++
Sbjct: 1704 TVTADTKAITT------TITATSTNTLPPINLHPNAPTHPATTYPMDRAA 1747
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +2
Query: 47 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 166
K C R VPPVS +P PC P +C
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4)
Length = 781
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 29 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 175
P +P+ P S+ T PP+ TP + TP P+ + + P T
Sbjct: 19 PAPTPTTPTSQATTASGPPII--TPIPLKETPTPALESAPAAMPDATDT 65
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,632,561
Number of Sequences: 59808
Number of extensions: 636134
Number of successful extensions: 2840
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 2196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2757
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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