Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0316
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0053 - 767131-767962,768517-769037,769384-769601,769720-76... 34 0.085
07_03_0831 - 21810002-21810319,21810423-21810573,21810660-218108... 33 0.26
06_03_0545 + 21983666-21986086 32 0.34
04_04_0225 + 23745404-23747788 32 0.34
02_05_0866 - 32331629-32334328 32 0.45
01_07_0286 - 42519269-42519754,42524657-42525253,42525277-42526311 32 0.45
05_05_0138 + 22644263-22644460,22644617-22644711,22645786-226459... 31 0.60
02_05_1159 + 34563779-34564715,34567232-34567399,34567508-34568688 31 0.60
04_04_1029 + 30243218-30244163,30246090-30246254,30246775-30247985 31 1.0
03_04_0116 + 17406702-17409008,17409385-17409501,17409502-17409561 31 1.0
11_01_0192 - 1523572-1526097 30 1.4
04_04_1420 + 33441260-33443704 30 1.4
04_01_0526 - 6901003-6901056,6901070-6901404,6901423-6901607,690... 30 1.4
03_06_0604 - 35006004-35008580 30 1.4
12_01_0198 - 1461305-1463812 30 1.8
05_01_0102 + 683789-683950,684033-684416 29 2.4
04_01_0530 - 6928528-6929500,6929514-6930964 29 2.4
12_02_0736 + 22650641-22650689,22650827-22650975,22651783-226518... 29 3.2
12_01_0496 + 3939731-3939758,3940459-3942773 29 3.2
12_01_0199 - 1467137-1467172,1467302-1467391,1468304-1468396,146... 29 3.2
08_02_1159 + 24773328-24773994,24775430-24775558,24776080-247762... 29 3.2
01_06_1588 + 38474698-38477169 29 3.2
11_01_0196 - 1547373-1549859 29 4.2
11_01_0194 + 1539847-1541533,1541650-1541730,1541773-1542335 29 4.2
07_01_0495 + 3722319-3722517,3723325-3723482,3723652-3723929,372... 29 4.2
04_04_1268 - 32262994-32263017,32263411-32263488,32263653-322638... 29 4.2
04_03_0616 - 18052596-18053779,18053935-18054099,18056236-180562... 29 4.2
04_03_0286 + 13915705-13915984,13916478-13917062,13918188-139186... 29 4.2
06_03_1471 + 30374988-30375959 28 5.6
05_03_0245 + 10890555-10890962 28 5.6
05_03_0244 + 10857139-10857516 28 5.6
03_06_0621 - 35147070-35148359,35148499-35148579,35148665-351487... 28 5.6
11_01_0350 + 2620247-2620291,2620708-2620797,2621098-2621346,262... 28 7.4
06_03_0778 - 24523780-24526353 28 7.4
03_01_0527 + 3960982-3961290,3961371-3961464,3961898-3962084,396... 28 7.4
01_06_0948 - 33242219-33242530,33242632-33242782,33242874-332431... 28 7.4
01_01_0150 - 1344247-1345011 28 7.4
01_01_0148 - 1337494-1338057 28 7.4
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 27 9.7
06_03_1470 + 30371391-30372353 27 9.7
06_01_0462 - 3285667-3288123 27 9.7
04_04_1269 + 32272290-32272321,32272924-32274143,32274390-322744... 27 9.7
04_01_0572 + 7404842-7405502,7405581-7406143,7406338-7406479,740... 27 9.7
02_05_1177 + 34739359-34740304,34740401-34740568,34740672-34741852 27 9.7
02_03_0273 + 17173983-17174339,17174423-17174575,17174638-171747... 27 9.7
02_02_0188 + 7617838-7620231,7621856-7622071,7622167-7622328,762... 27 9.7
01_01_1044 + 8231933-8231941,8232091-8232166,8232423-8232871 27 9.7
>10_01_0053 -
767131-767962,768517-769037,769384-769601,769720-769825,
769958-770017
Length = 578
Score = 34.3 bits (75), Expect = 0.085
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +1
Query: 181 PQSLATHHLAEVMLYVMLVSVHVHMLFRRSIRTVVGLNARPMVNVHLRV--LVKEESVLI 354
P SLAT H V+L++ + V + L RR+ G+ + V L V L+ S L+
Sbjct: 389 PASLATFHSIGVLLWIPVYDVALVPLARRATGKPKGITQLQRIGVGLAVAALIMAYSALV 448
Query: 355 HARELAVLMLSAQSTII 405
R LA A T I
Sbjct: 449 EERRLAAARAGAARTSI 465
>07_03_0831 -
21810002-21810319,21810423-21810573,21810660-21810897,
21811011-21811221,21811336-21811559,21811696-21811806,
21813265-21813636,21813810-21814782
Length = 865
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 42 TNPCE--GSCGFKAECRVQDHIPICSCPVGY 128
T PC CG AEC D+ PIC+C G+
Sbjct: 296 TIPCHRYNLCGDNAECTADDNEPICTCFTGF 326
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 369 CGTNAICSINNHIPSCTC 422
CG NA C+ +++ P CTC
Sbjct: 305 CGDNAECTADDNEPICTC 322
>06_03_0545 + 21983666-21986086
Length = 806
Score = 32.3 bits (70), Expect = 0.34
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 363 GACGTNAICSINNHIPSCTCPP 428
G CG N IC + +P+C CPP
Sbjct: 282 GVCGINGIC-VYTPVPACACPP 302
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 57 GSCGFKAECRVQDHIPICSCPVGY 128
G CG C V +P C+CP GY
Sbjct: 282 GVCGINGIC-VYTPVPACACPPGY 304
>04_04_0225 + 23745404-23747788
Length = 794
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +3
Query: 363 GACGTNAICSIN---NHIPSCTCPPNTS 437
GACG N+ CS N N C CPP+ S
Sbjct: 299 GACGFNSYCSFNWNQNETVECQCPPHYS 326
>02_05_0866 - 32331629-32334328
Length = 899
Score = 31.9 bits (69), Expect = 0.45
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 360 PGACGTNAICSINNHIPSCTCPP 428
P +CG C+ N + SCTCPP
Sbjct: 290 PLSCGALGFCAPNGNASSCTCPP 312
>01_07_0286 - 42519269-42519754,42524657-42525253,42525277-42526311
Length = 705
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Frame = +3
Query: 363 GACGTNAICSINNHI-PSCTCPPN----TSGDPFTFCT 461
GACG N+ C ++ PSC CPP +GD CT
Sbjct: 292 GACGFNSYCVLDRDAQPSCLCPPGFDLIDAGDAAGGCT 329
>05_05_0138 +
22644263-22644460,22644617-22644711,22645786-22645949,
22646725-22646970,22647600-22647944,22648516-22648586,
22648676-22648794,22650508-22650637,22650806-22650857,
22650974-22651136,22651244-22651418,22651772-22651942,
22652275-22652388,22652559-22652609
Length = 697
Score = 31.5 bits (68), Expect = 0.60
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = +3
Query: 450 TFCTEVVHQDTPTSGVFSFACGPYRECSVSAKRVPLTGSVNQVMLGRLHLVDLNALLVR 626
+FC + + +G+ G ++ S+ +VP+ G ++ V++G L++ + LVR
Sbjct: 222 SFCPSIYGHELVKAGITLALFGGVQKHSIDQNKVPVRGDIHAVVVGNPSLIEGLSFLVR 280
>02_05_1159 + 34563779-34564715,34567232-34567399,34567508-34568688
Length = 761
Score = 31.5 bits (68), Expect = 0.60
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +3
Query: 249 AHVISEIHTYGCRLECSTNGECSPTRT--CQG-GKCVDPCPGACGTNAICSINNHIPSCT 419
+H I I G R CS E +P CQ +C P AC ++ ++ SC
Sbjct: 282 SHCIDSIDGPGYRCNCSQGYEGNPYLDGGCQDINECERPDKYACFGECTNTLGSY--SCM 339
Query: 420 CPPNTSGDP 446
CP GDP
Sbjct: 340 CPRGARGDP 348
>04_04_1029 + 30243218-30244163,30246090-30246254,30246775-30247985
Length = 773
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 39 CTNPCEGSCGFKAECRVQDHIPICSCPVGYSGD 137
C +P C + C+ + + C+CP G +GD
Sbjct: 320 CAHPERNPCMYPEYCKDEQGVTSCACPEGRNGD 352
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/70 (27%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Frame = +3
Query: 237 LCTCAHVISEIHTYGCRLECSTNGECSPTRTCQG-GKCVDPCPGACGTNAICSINNHIPS 413
+ TC V + +Y CR G C G C P C C + S
Sbjct: 284 MSTCNDVYNGT-SYICRCNEGYEGNPYEQNGCSGLDVCAHPERNPCMYPEYCKDEQGVTS 342
Query: 414 CTCPPNTSGD 443
C CP +GD
Sbjct: 343 CACPEGRNGD 352
>03_04_0116 + 17406702-17409008,17409385-17409501,17409502-17409561
Length = 827
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +3
Query: 270 HTYGCRLECSTNGECSPTRTCQGGKCVDPCPGACGTNAICSINNHIPSCTCPP 428
H RL +NGE + C G CG N IC + P+C+CPP
Sbjct: 257 HDGNLRLYSLSNGEWLVSWVAISQPC--NIHGLCGPNGICHYSP-TPTCSCPP 306
>11_01_0192 - 1523572-1526097
Length = 841
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = +3
Query: 348 VDPCP--GACGTNAICSINNHIPSCTCPPN-TSGDP 446
V+PC G CG NA+C + + P C C P DP
Sbjct: 296 VNPCVIHGVCGANAVC-LYSPAPVCVCVPGYARADP 330
>04_04_1420 + 33441260-33443704
Length = 814
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Frame = +3
Query: 363 GACGTNAICSINNHIPSCTCP----PNTSGD 443
G CG+N ICS P+C+CP PN + D
Sbjct: 293 GLCGSNGICSFRPG-PTCSCPVGYVPNDASD 322
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 57 GSCGFKAECRVQDHIPICSCPVGY 128
G CG C + P CSCPVGY
Sbjct: 293 GLCGSNGICSFRPG-PTCSCPVGY 315
>04_01_0526 -
6901003-6901056,6901070-6901404,6901423-6901607,
6902201-6904641
Length = 1004
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = +3
Query: 363 GACGTNAICSIN---NHIPSCTCPP 428
G CG N+ C+ + N I SC CPP
Sbjct: 307 GVCGFNSYCTFDGTRNQIASCQCPP 331
>03_06_0604 - 35006004-35008580
Length = 858
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = +3
Query: 285 RLECSTNGECSPTRTCQGGKCVDPCP--GACGTNAICSINNHIPSCTCP 425
R + G +PT Q D C G CG +C N P C CP
Sbjct: 257 RAYSAARGSNAPTE--QWSAVADQCQVFGYCGNMGVCGYNGTSPVCRCP 303
>12_01_0198 - 1461305-1463812
Length = 835
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +3
Query: 348 VDPCP--GACGTNAICSINNHIPSCTCPP 428
V+PC G CG NA+C + + P C C P
Sbjct: 296 VNPCVIHGVCGANAVC-LYSPAPVCVCVP 323
>05_01_0102 + 683789-683950,684033-684416
Length = 181
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -3
Query: 238 RPALHKALLPQGDGLQGSGEGV--GVTITSEHWMNGSPEYP 122
R A H L P GD L +G GV V + +H M+ + E P
Sbjct: 117 RAAEHPELGPIGDALASAGHGVTSSVLVVQQHDMSNADELP 157
>04_01_0530 - 6928528-6929500,6929514-6930964
Length = 807
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = +3
Query: 363 GACGTNAICSIN--NHIPSCTCPPN 431
GACG N+ C+I+ + SC CP N
Sbjct: 306 GACGFNSYCTIDGTKNTTSCLCPQN 330
>12_02_0736 +
22650641-22650689,22650827-22650975,22651783-22651839,
22653534-22653611,22654688-22654953,22655249-22655351
Length = 233
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = -2
Query: 593 EATQHDLIYRTSQRHPFCAYGTFSVWTTCEGEHARSRCILVNDFSTESERVSGSIRWAST 414
+A DL+ + HP G + G H+ +R L D + R GS R AS
Sbjct: 92 DAVGMDLVSHITSEHPSFFKGKWRNRRVSHGSHSSTRATLKKDAAYLQYRYGGSTRAASH 151
Query: 413 RRD 405
D
Sbjct: 152 NTD 154
>12_01_0496 + 3939731-3939758,3940459-3942773
Length = 780
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = +3
Query: 354 PCP--GACGTNAICSINNHIPSCTCPP 428
PC G CG N IC+ I C+CPP
Sbjct: 269 PCEIHGLCGWNGICAYTPKI-GCSCPP 294
>12_01_0199 -
1467137-1467172,1467302-1467391,1468304-1468396,
1468488-1469515,1470005-1470552,1470656-1470695,
1473774-1475196
Length = 1085
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = +3
Query: 351 DPC--PGACGTNAICSINNHIPSCTCPPN-TSGDP 446
+PC G CG NA+C + + P C C P DP
Sbjct: 296 NPCIIHGVCGANAVC-LYSPAPVCVCAPGYARADP 329
>08_02_1159 +
24773328-24773994,24775430-24775558,24776080-24776220,
24777393-24777487,24777545-24778606
Length = 697
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Frame = +3
Query: 276 YGCRLECSTNGECSPTRTCQG-GKCVDPCPGACGTNAICSINNHIPSCTCPPNTSGDPFT 452
Y C+ G S CQ +C +P +C +C C C + GDPFT
Sbjct: 246 YDCQCHHGYKGNASILNGCQDINECAEPEKYSC-YGGLCINTPGAFVCRCHDGSYGDPFT 304
>01_06_1588 + 38474698-38477169
Length = 823
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +3
Query: 42 TNPC--EGSCGFKAECRVQDHIPICSCPVGY 128
+ PC G CG+ C V P CSCP GY
Sbjct: 285 SQPCGIHGLCGWNGLC-VYTPRPACSCPPGY 314
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +3
Query: 354 PCP--GACGTNAICSINNHIPSCTCPP 428
PC G CG N +C + P+C+CPP
Sbjct: 287 PCGIHGLCGWNGLC-VYTPRPACSCPP 312
>11_01_0196 - 1547373-1549859
Length = 828
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +3
Query: 351 DPCP--GACGTNAICSINNHIPSCTCPP 428
+PC G CG NA+C + + P C C P
Sbjct: 292 NPCNIHGVCGANAVC-LYSPAPVCVCAP 318
>11_01_0194 + 1539847-1541533,1541650-1541730,1541773-1542335
Length = 776
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +3
Query: 351 DPC--PGACGTNAICSINNHIPSCTCPP 428
+PC G CG NA+C + + P C C P
Sbjct: 304 NPCIIHGVCGANAVC-LYSPAPVCVCAP 330
>07_01_0495 +
3722319-3722517,3723325-3723482,3723652-3723929,
3723946-3724474
Length = 387
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 342 KCVDPCPGACGTNAICSINNHIPSCTCPPNTSGDP 446
+C+ P C N + + + +C CPP TSG+P
Sbjct: 70 ECLHPKEYGCYGNCMNTPGGY--TCVCPPGTSGNP 102
>04_04_1268 -
32262994-32263017,32263411-32263488,32263653-32263800,
32263890-32264127,32264210-32264420,32264499-32264680,
32264765-32264866,32265009-32266317,32266906-32266988,
32267436-32267559
Length = 832
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 339 GKCVDPCPGACGTNAICSINNHIPSCTCP 425
G C DP G+CG C + IP C CP
Sbjct: 368 GDC-DPY-GSCGPFGYCDFTSVIPRCQCP 394
>04_03_0616 -
18052596-18053779,18053935-18054099,18056236-18056260,
18057259-18057312,18057354-18057619,18058633-18059371
Length = 810
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +3
Query: 45 NPCEGSC-GFKAECRVQDHIP--ICSCPVGYSGDPFIQCS 155
NP +C G + C + P IC+C GY G+P++Q S
Sbjct: 203 NPASYACKGDYSVCLNSTNGPGYICNCKKGYQGNPYLQDS 242
>04_03_0286 +
13915705-13915984,13916478-13917062,13918188-13918661,
13918963-13920208,13920282-13920297
Length = 866
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
Frame = +3
Query: 108 CSCPVGYSGDPFIQ--CSEVIV 167
CSC +G+ G+P+IQ C V++
Sbjct: 429 CSCTLGFQGNPYIQDGCQGVVI 450
>06_03_1471 + 30374988-30375959
Length = 323
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +3
Query: 294 CSTNGECSPTRTCQGGKCVDPCPGACG 374
CS G C T G C C G+CG
Sbjct: 38 CSQYGWCGSTSAYCGSGCQSQCSGSCG 64
>05_03_0245 + 10890555-10890962
Length = 135
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +3
Query: 219 ALCNAGLCTCAHVISEIHTYGCRLECSTNGECSPTRTCQGGKCVD 353
A C G C E H GC N C R+C GG+CVD
Sbjct: 70 ATCCGGRCVDTGASGE-HCGGC------NKACKHGRSCCGGRCVD 107
>05_03_0244 + 10857139-10857516
Length = 125
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +3
Query: 219 ALCNAGLCTCAHVISEIHTYGCRLECSTNGECSPTRTCQGGKCVD 353
A C G C E H GC N C R+C GG+CVD
Sbjct: 61 ATCCGGRCVDTGASGE-HCGGC------NKACKHGRSCCGGRCVD 98
>03_06_0621 -
35147070-35148359,35148499-35148579,35148665-35148741,
35148792-35149298,35149405-35150278
Length = 942
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 366 ACGTNAICSINNHIPSCTCPPNT-SGDPF 449
ACG+N + N SC CP N+ G+P+
Sbjct: 256 ACGSNNCIDVANGGYSCACPGNSDDGNPY 284
>11_01_0350 +
2620247-2620291,2620708-2620797,2621098-2621346,
2621888-2621911
Length = 135
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 54 EGSCGFKAECRVQDHIPICSCPVGYSGD 137
EG G + +CR D I I C V GD
Sbjct: 7 EGDDGGEKQCRTADDIRIADCTVAAGGD 34
>06_03_0778 - 24523780-24526353
Length = 857
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 42 TNPCEGSCGFKAECRVQDHIPI-CSCPVGYS 131
T +G CG + C V D + C+CP GYS
Sbjct: 314 TRGLDGFCGPNSYCVVSDDGRLDCACPSGYS 344
>03_01_0527 +
3960982-3961290,3961371-3961464,3961898-3962084,
3962194-3962449,3962561-3962773,3962856-3962942,
3963089-3963223,3963296-3963409,3963507-3963754,
3963824-3963904,3963979-3964210,3964340-3964438,
3964513-3964701,3964928-3965023
Length = 779
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Frame = +3
Query: 285 RLECSTNGECSPTRTCQGGKCVDPCPGA-----CGTNAICSINNHIPSCTCPP 428
R+ECS +CS C+GG C C G C + S+ +PS PP
Sbjct: 261 RVECSCINQCSGHGHCRGGFC--QCDGGYFGIDCSMPSNYSVAYGMPSWLQPP 311
>01_06_0948 -
33242219-33242530,33242632-33242782,33242874-33243111,
33243196-33243298,33243323-33243406,33243640-33243815,
33243943-33244074,33248406-33248967,33249084-33249842
Length = 838
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 369 CGTNAICSINNHIPSCTC 422
CG N +C NN +P C+C
Sbjct: 303 CGANGVCDTNN-LPVCSC 319
>01_01_0150 - 1344247-1345011
Length = 254
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = +3
Query: 291 ECSTNGECSPT--RTCQGGKCVDPCPGACGTNAICSINNHIPSCTCPPNTSGDPFTFCT 461
+C N C+ + C G V C GAC + ++ P C +G P CT
Sbjct: 191 DCCDNTTCTKSIPPICSCGDKVAACDGACKDCQPVASSSEPPRFVCKDQFTGQPGPKCT 249
>01_01_0148 - 1337494-1338057
Length = 187
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +3
Query: 330 CQGGKCVDPCPGACGTNAICSINNHIPSCTCPPNTSGDPFTFCTEVVH 473
C V+ C ACG + + P C + +GDP CT +H
Sbjct: 139 CHCSDEVESCAAACGQCEMVDSWSWRPLFVCRDSFTGDPGPRCTPEMH 186
>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +1
Query: 217 MLYVMLVSVHVHMLFRRSIRTVVGLNARPMVNVHLRVLVKEESVLIHARELAVLMLSAQS 396
+L ++++ + LF S + V + R +V++ + L+H L L+LSA
Sbjct: 4223 ILQTYVMNLQMGHLFDASKKLTVSV--RRLVDIKPELPSSIGMQLMHLHALLGLVLSAAE 4280
Query: 397 TIISRLVLAHRILPE 441
I+S L+ AHR E
Sbjct: 4281 GILSELLEAHRTTSE 4295
>06_03_1470 + 30371391-30372353
Length = 320
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 294 CSTNGECSPTRTCQGGKCVDPCPGACG 374
CS G C T G C C G CG
Sbjct: 36 CSQYGWCGSTSDYCGAGCQSQCSGGCG 62
>06_01_0462 - 3285667-3288123
Length = 818
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 363 GACGTNAICSINNHIPSCTC 422
G CGTNA+C N+IP C
Sbjct: 302 GVCGTNAVC---NYIPELHC 318
>04_04_1269 +
32272290-32272321,32272924-32274143,32274390-32274433,
32274883-32275093,32275176-32275413,32275498-32275585,
32275865-32276020,32276370-32276444
Length = 687
Score = 27.5 bits (58), Expect = 9.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 363 GACGTNAICSINNHIPSCTC 422
G+CG C + + +PSC C
Sbjct: 287 GSCGPFGYCDLTSAVPSCQC 306
>04_01_0572 +
7404842-7405502,7405581-7406143,7406338-7406479,
7406605-7407436,7407546-7407729
Length = 793
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +3
Query: 294 CSTNGECSPTRTCQGGKCVDPCPGACGTNAICS 392
C+ + CS + G +D G+C ++ CS
Sbjct: 458 CTVSSSCSASTVSTSGSSIDSSSGSCTDSSSCS 490
>02_05_1177 + 34739359-34740304,34740401-34740568,34740672-34741852
Length = 764
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Frame = +3
Query: 216 NALCNAGLCTCAHVISEIHTYGCRLECSTNGECSPTRT--CQG-GKCVDPCPGACGTNAI 386
NA A T + I G R C E +P C +C+ P C +
Sbjct: 274 NATDYACRSTNSECFDTIDGQGYRCNCCQGYEGNPYLDGGCTDINECLRPEKYGCYGDCT 333
Query: 387 CSINNHIPSCTCPPNTSGD 443
+ +H +C CPP TSG+
Sbjct: 334 NMLGSH--TCVCPPGTSGN 350
>02_03_0273 +
17173983-17174339,17174423-17174575,17174638-17174700,
17174943-17175026,17175120-17175242,17175466-17175519,
17175669-17175764,17176163-17176258,17177179-17177324,
17178503-17178632,17178697-17179272,17179364-17179462,
17179535-17179687,17179794-17180558,17181384-17181683
Length = 1064
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 515 TTCEGEHARSRCILVNDFSTESERVSGSIRWASTRRDMIVD*ADS 381
TT E +RS C+ +ES+ + + T R +VD A S
Sbjct: 320 TTANAESSRSHCVFTCFIKSESKNMEDGSNFTRTSRINLVDLAGS 364
>02_02_0188 +
7617838-7620231,7621856-7622071,7622167-7622328,
7622466-7622516,7622936-7623070,7623161-7623184,
7623341-7623452,7623776-7623901,7624004-7624053,
7624339-7624497,7624582-7624677,7624751-7624866,
7624907-7624984,7624985-7625108,7625193-7625306,
7625423-7625503,7625616-7625756,7625834-7625848
Length = 1397
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +3
Query: 348 VDPC--PGACGTNAICSINNHIPSCTCPPNTSGDPFTF 455
+D C P CG ICS C+CP SGD F
Sbjct: 327 LDDCAYPTVCGDYGICSEGQ----CSCPSRNSGDEDQF 360
>01_01_1044 + 8231933-8231941,8232091-8232166,8232423-8232871
Length = 177
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 279 GCRLECSTNGECSPTRTCQGGKCVDPCPGAC 371
GC CST P G C PCP C
Sbjct: 108 GCPCSCSTPCSFPPIGCHDRGICPPPCPPPC 138
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,759,287
Number of Sequences: 37544
Number of extensions: 508406
Number of successful extensions: 1500
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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