Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0316
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       27   0.39 
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    27   0.51 
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           26   0.89 
DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domai...    25   1.6  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   8.3  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   8.3  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   8.3  

>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = +3

Query: 330 CQGGKC-VDPCPGACGTNAICSINNHIPSCTCPPNTSGDP 446
           C GG+    P P  C    IC   +     TCPP T  DP
Sbjct: 470 CAGGRYGFVPHPTNCARYYICLTADTYYEFTCPPGTLFDP 509


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 33/133 (24%), Positives = 44/133 (33%), Gaps = 1/133 (0%)
 Frame = +3

Query: 33   EKCTNPCEGSCGFKAECRVQDHIPICSCPVGYSGDPFIQCSEVIVXXXXXXXXXXXXXXG 212
            ++C  P  G+C   A     D +    CPVGY G     CS+                 G
Sbjct: 774  KRCPCPNNGACMQMAG----DTVICLECPVGYFGPRCELCSD-------GYYGDPTGVYG 822

Query: 213  SNALCNAGLCTCAHVISEIHTYGCRLECSTNGECSPTRTCQGGKCVDPC-PGACGTNAIC 389
            S  +C    C C   +       C     T GEC        G   D C PG  G + + 
Sbjct: 823  SVRMCQP--CDCNGNVDPNAVGNCN---RTTGECLKCIHNTAGPHCDQCLPGHFG-DPLA 876

Query: 390  SINNHIPSCTCPP 428
              +     C+C P
Sbjct: 877  EPHGSCEECSCYP 889



 Score = 23.8 bits (49), Expect = 4.8
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +3

Query: 333 QGGKCVDPCPGACGTNA-ICSINNHIPSCTCPPNTSGDPFTFCTE 464
           +GG  +   P  C  +A IC  ++    C C  NT+GD    C +
Sbjct: 717 RGGPFMPCVPCDCNKHAEIC--DSETGRCICQHNTAGDTCDQCAK 759


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 26.2 bits (55), Expect = 0.89
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
 Frame = +3

Query: 243 TCAHVISEIHTYGCRLECSTNGECSPTRTCQGGKCVDPCPGACGTN---AICSINNHIPS 413
           TC  + SEIH    + E    G     RTC G   V+ C G C +    ++ +    +  
Sbjct: 84  TCETLPSEIHLI--KEEYDELGRLY--RTCNGDVTVNKCEGKCNSQVQPSVITATGFLKE 139

Query: 414 CTC 422
           C C
Sbjct: 140 CYC 142


>DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 161

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = +3

Query: 228 NAGLCTCAHVISEIHTYGCRLECS 299
           N G C CA  I   H Y CR ECS
Sbjct: 104 NDGGCNCAVRIR--HAYPCRDECS 125



 Score = 24.6 bits (51), Expect = 2.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 642 FKVLHSALTRHSGLQDGG 589
           ++ +H A+TR S L DGG
Sbjct: 90  YESIHGAITRKSTLNDGG 107


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 4/31 (12%)
 Frame = -3

Query: 211 PQGDGLQGSGEGVGVTITSEH----WMNGSP 131
           P G GL GSG   G + TS      W   SP
Sbjct: 26  PAGTGLNGSGTEPGWSATSAELEIAWRESSP 56


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -1

Query: 291 QAYNRTYGSPK*HVHMYRDQHYIKHY 214
           +A++R YG+     + Y ++HY + Y
Sbjct: 417 EAFDRIYGNKINIGNTYAEEHYYRRY 442


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -1

Query: 291 QAYNRTYGSPK*HVHMYRDQHYIKHY 214
           +A++R YG+     + Y ++HY + Y
Sbjct: 417 EAFDRIYGNKINIGNTYAEEHYYRRY 442


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 804,900
Number of Sequences: 2352
Number of extensions: 21050
Number of successful extensions: 39
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)