Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0316
         (648 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nea...    34   0.071
At5g60900.1 68418.m07640 lectin protein kinase family protein co...    31   0.50 
At1g34300.1 68414.m04256 lectin protein kinase family protein co...    31   0.66 
At2g30290.1 68415.m03687 vacuolar sorting receptor, putative sim...    30   1.5  
At5g38330.1 68418.m04626 plant defensin-fusion protein, putative...    29   2.7  
At4g18160.1 68417.m02698 outward rectifying potassium channel, p...    28   4.7  
At3g14067.1 68416.m01775 subtilase family protein contains simil...    28   4.7  
At2g35615.1 68415.m04367 aspartyl protease family protein contai...    28   4.7  
At2g40370.1 68415.m04978 laccase, putative / diphenol oxidase, p...    27   8.1  
At1g67000.1 68414.m07618 protein kinase family protein contains ...    27   8.1  

>At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nearly
           identical to vacuolar sorting receptor homolog
           (GP:1737218) [Arabidopsis thaliana]
          Length = 623

 Score = 34.3 bits (75), Expect = 0.071
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +3

Query: 54  EGSCGFKAECRVQDHIPICSCPVGYSGDPFIQCSEV 161
           E   GF     V DH   C CP+G+ GD    C +V
Sbjct: 478 ESRGGFTYSACVDDHSKDCKCPLGFKGDGVKNCEDV 513


>At5g60900.1 68418.m07640 lectin protein kinase family protein
           contains Pfam domains, PF01453: Lectin (probable mannose
           binding) and PF00069: Protein kinase domain
          Length = 748

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +3

Query: 366 ACGTNAICSI-NNHIPSCTCP 425
           ACG N ICS+ NN  P C CP
Sbjct: 284 ACGYNNICSLGNNKRPKCECP 304


>At1g34300.1 68414.m04256 lectin protein kinase family protein
           contains Pfam domains, PF01453: Lectin (probable mannose
           binding) and PF00069: Protein kinase domain
          Length = 829

 Score = 31.1 bits (67), Expect = 0.66
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +3

Query: 348 VDPCP--GACGTNAICSINNHIPSCTCP 425
           VD C   G CG   ICS N+  P C+CP
Sbjct: 265 VDQCLVYGYCGNFGICSYNDTNPICSCP 292



 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3

Query: 57  GSCGFKAECRVQDHIPICSCP 119
           G CG    C   D  PICSCP
Sbjct: 272 GYCGNFGICSYNDTNPICSCP 292


>At2g30290.1 68415.m03687 vacuolar sorting receptor, putative
           similar to vacuolar sorting receptor homolog
           [Arabidopsis thaliana] GI:1737218
          Length = 625

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 81  CRVQDHIPICSCPVGYSGDPFIQCSEV 161
           CR  DH   C CP G+ GD   +C +V
Sbjct: 492 CR-DDHSKGCKCPPGFIGDGLKECKDV 517


>At5g38330.1 68418.m04626 plant defensin-fusion protein, putative
           contains a plant defensin motif, personal communication,
           Bart Thomma (Bart.Thomma@agr.kuleuven.ac.be)
          Length = 122

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
 Frame = +3

Query: 288 LECSTNGECSPTRTCQG--GKCVDPCPGAC 371
           L C+   EC PT+ C G  G C + C   C
Sbjct: 62  LLCTCTYECGPTKLCNGGLGNCGESCNEQC 91


>At4g18160.1 68417.m02698 outward rectifying potassium channel,
           putative (KCO6) similar to kco1 [Arabidopsis thaliana]
           gi|2230761|emb|CAA69158; member of the 2 pore, 4
           transmembrane (2P/4TM) K+ channel family, PMID:11500563
          Length = 436

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 307 PLVEHSSLQPYVWISEITCAHVQRPALHKA 218
           PL+     QP  W+S+ T +H Q  ALH++
Sbjct: 92  PLLPPPPPQPEPWLSDQTSSHCQGHALHRS 121


>At3g14067.1 68416.m01775 subtilase family protein contains
           similarity to cucumisin-like serine protease GI:3176874
           from [Arabidopsis thaliana]
          Length = 777

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -3

Query: 193 QGSGEGVGVTITSEHWMNGSPEYPTGQLQIGIWSCTRH 80
           Q   +GV V   S      +PEY T  + IG +  TRH
Sbjct: 274 QAVADGVHVISLSVGASGSAPEYHTDSIAIGAFGATRH 311


>At2g35615.1 68415.m04367 aspartyl protease family protein contains
           Pfam domain, PF00026: eukaryotic aspartyl protease
          Length = 447

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +3

Query: 429 NTSGDPFTFCTEVVHQDTPTSGVFS 503
           ++SG P  F  E++H+D+P S +++
Sbjct: 18  SSSGHPKNFSVELIHRDSPLSPIYN 42


>At2g40370.1 68415.m04978 laccase, putative / diphenol oxidase,
           putative similar to laccase [Populus balsamifera subsp.
           trichocarpa][GI:3805960]
          Length = 580

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -3

Query: 616 KAFRSTRWRRPNMT*FTEPVSGTRFAL-TEHSLYGPH 509
           K FRS R + PN T FT  ++   FAL + +SL   H
Sbjct: 381 KNFRSRRCQGPNGTRFTASMNNVSFALPSNYSLLQAH 417


>At1g67000.1 68414.m07618 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069; contains
           serine/threonine protein kinase domain,
           INTERPRO:IPR002290
          Length = 717

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
 Frame = +3

Query: 354 PCPGACGTNAICSINNHIPSCTCPPNTSGD----PFTFCTEVVHQDTPTSGVFSFACGPY 521
           PC     T  ICS N    SC    + SG     P+    + V++        SF+CG  
Sbjct: 53  PCQQCSSTRGICSFNGTTQSCCNATSPSGGVSCVPYQHSADEVYRRCSE----SFSCGSQ 108

Query: 522 RE 527
           R+
Sbjct: 109 RD 110


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,130,622
Number of Sequences: 28952
Number of extensions: 382883
Number of successful extensions: 1003
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)