Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0313
(601 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 210 8e-55
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 210 8e-55
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 210 8e-55
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 210 8e-55
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 210 8e-55
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 210 8e-55
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 210 8e-55
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 210 8e-55
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 210 8e-55
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 210 8e-55
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 204 3e-53
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 140 7e-34
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 132 1e-31
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 132 1e-31
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 131 3e-31
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 131 3e-31
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 116 1e-26
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 102 2e-22
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 82 3e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.010
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.010
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z81107-5|CAB03232.1| 203|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 4.4
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 4.4
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 4.4
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 4.4
AF036692-6|AAB88328.1| 397|Caenorhabditis elegans Hypothetical ... 28 4.4
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 210 bits (512), Expect = 8e-55
Identities = 98/115 (85%), Positives = 98/115 (85%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 TQIMFETFNTPAMYVAIQAXXXXXXXXXXXXXXXDSGDGVFHTVPIY*GYALPHA 599
TQIMFETFNTPAMYVAIQA DSGDGV HTVPIY GYALPHA
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
Score = 132 bits (320), Expect = 1e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 210 bits (512), Expect = 8e-55
Identities = 98/115 (85%), Positives = 98/115 (85%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 TQIMFETFNTPAMYVAIQAXXXXXXXXXXXXXXXDSGDGVFHTVPIY*GYALPHA 599
TQIMFETFNTPAMYVAIQA DSGDGV HTVPIY GYALPHA
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 175
Score = 131 bits (317), Expect = 3e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 210 bits (512), Expect = 8e-55
Identities = 98/115 (85%), Positives = 98/115 (85%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 TQIMFETFNTPAMYVAIQAXXXXXXXXXXXXXXXDSGDGVFHTVPIY*GYALPHA 599
TQIMFETFNTPAMYVAIQA DSGDGV HTVPIY GYALPHA
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
Score = 132 bits (320), Expect = 1e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 210 bits (512), Expect = 8e-55
Identities = 98/115 (85%), Positives = 98/115 (85%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 TQIMFETFNTPAMYVAIQAXXXXXXXXXXXXXXXDSGDGVFHTVPIY*GYALPHA 599
TQIMFETFNTPAMYVAIQA DSGDGV HTVPIY GYALPHA
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
Score = 132 bits (320), Expect = 1e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 210 bits (512), Expect = 8e-55
Identities = 98/115 (85%), Positives = 98/115 (85%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 TQIMFETFNTPAMYVAIQAXXXXXXXXXXXXXXXDSGDGVFHTVPIY*GYALPHA 599
TQIMFETFNTPAMYVAIQA DSGDGV HTVPIY GYALPHA
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
Score = 132 bits (320), Expect = 1e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 210 bits (512), Expect = 8e-55
Identities = 98/115 (85%), Positives = 98/115 (85%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 TQIMFETFNTPAMYVAIQAXXXXXXXXXXXXXXXDSGDGVFHTVPIY*GYALPHA 599
TQIMFETFNTPAMYVAIQA DSGDGV HTVPIY GYALPHA
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 175
Score = 130 bits (313), Expect = 1e-30
Identities = 57/62 (91%), Positives = 62/62 (100%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 210 bits (512), Expect = 8e-55
Identities = 98/115 (85%), Positives = 98/115 (85%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 TQIMFETFNTPAMYVAIQAXXXXXXXXXXXXXXXDSGDGVFHTVPIY*GYALPHA 599
TQIMFETFNTPAMYVAIQA DSGDGV HTVPIY GYALPHA
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
Score = 132 bits (320), Expect = 1e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 210 bits (512), Expect = 8e-55
Identities = 98/115 (85%), Positives = 98/115 (85%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 17 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 76
Query: 435 TQIMFETFNTPAMYVAIQAXXXXXXXXXXXXXXXDSGDGVFHTVPIY*GYALPHA 599
TQIMFETFNTPAMYVAIQA DSGDGV HTVPIY GYALPHA
Sbjct: 77 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 131
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 208 MVGMGQKDSYVGDEAQAK 261
MVGMGQKDSYVGDEAQ+K
Sbjct: 1 MVGMGQKDSYVGDEAQSK 18
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 210 bits (512), Expect = 8e-55
Identities = 98/115 (85%), Positives = 98/115 (85%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 47 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 106
Query: 435 TQIMFETFNTPAMYVAIQAXXXXXXXXXXXXXXXDSGDGVFHTVPIY*GYALPHA 599
TQIMFETFNTPAMYVAIQA DSGDGV HTVPIY GYALPHA
Sbjct: 107 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 161
Score = 94.3 bits (224), Expect = 6e-20
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = +1
Query: 130 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ+K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 48
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 210 bits (512), Expect = 8e-55
Identities = 98/115 (85%), Positives = 98/115 (85%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 TQIMFETFNTPAMYVAIQAXXXXXXXXXXXXXXXDSGDGVFHTVPIY*GYALPHA 599
TQIMFETFNTPAMYVAIQA DSGDGV HTVPIY GYALPHA
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
Score = 132 bits (320), Expect = 1e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 204 bits (499), Expect = 3e-53
Identities = 94/115 (81%), Positives = 97/115 (84%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKM
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKM 119
Query: 435 TQIMFETFNTPAMYVAIQAXXXXXXXXXXXXXXXDSGDGVFHTVPIY*GYALPHA 599
TQIMFETFNTPAMYV IQA D+GDGV HTVPIY GYALPHA
Sbjct: 120 TQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHA 174
Score = 126 bits (304), Expect = 1e-29
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +1
Query: 82 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQAK 261
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ+K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 140 bits (339), Expect = 7e-34
Identities = 62/116 (53%), Positives = 80/116 (68%), Gaps = 1/116 (0%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREK 431
S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+
Sbjct: 63 SNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRER 122
Query: 432 MTQIMFETFNTPAMYVAIQAXXXXXXXXXXXXXXXDSGDGVFHTVPIY*GYALPHA 599
+I FETFN PA+Y+ +QA DSGDGV H VPI G+A+ HA
Sbjct: 123 SAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHA 178
Score = 57.6 bits (133), Expect = 6e-09
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQA 258
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAES 63
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 132 bits (320), Expect = 1e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
Score = 60.5 bits (140), Expect = 9e-10
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKI 332
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 132 bits (320), Expect = 1e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
Score = 60.5 bits (140), Expect = 9e-10
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKI 332
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 131 bits (317), Expect = 3e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
Score = 60.5 bits (140), Expect = 9e-10
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKI 332
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 131 bits (317), Expect = 3e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDM 323
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 116 bits (280), Expect = 1e-26
Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = +3
Query: 261 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMT 437
R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM
Sbjct: 65 RQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMF 124
Query: 438 QIMFETFNTPAMYVAIQAXXXXXXXXXXXXXXXDSGDGVFHTVPIY*GYALPH 596
Q+MFE + ++YVA+QA DSGDGV H P+Y G+AL H
Sbjct: 125 QVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHH 177
Score = 47.2 bits (107), Expect = 9e-06
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 249
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEE 60
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 102 bits (244), Expect = 2e-22
Identities = 50/114 (43%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Frame = +3
Query: 273 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 452
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 453 TFNTPAMYVAIQA--------XXXXXXXXXXXXXXXDSGDGVFHTVPIY*GYAL 590
+FN P +Y+A+QA DSGDGV H +P+ GY +
Sbjct: 140 SFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVI 193
Score = 36.7 bits (81), Expect = 0.013
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 183
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 81.8 bits (193), Expect = 3e-16
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = +3
Query: 288 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 467
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 468 AMYVAIQAXXXXXXXXXXXXXXXDSGDGVFHTVPIY*GYALPHA 599
A Y++ DSG VP++ GYA+ HA
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHA 197
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 183
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 285 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 458
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 285 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 458
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = -1
Query: 337 CQIFSMSSQLVTIPC-SMGYLRVRIPLLLVPHLLHKSPSVP-YRPSRPD 197
CQ+FS QLVT+ SMG +++++ + +P L KS + P P+ P+
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPE 299
>Z81107-5|CAB03232.1| 203|Caenorhabditis elegans Hypothetical
protein R07H5.7 protein.
Length = 203
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 560 VEDTVAGVQH*YRWYDRSVQREHGLD 483
VE + +Q Y+WYD+ V+ E GLD
Sbjct: 151 VERKLVFIQDTYKWYDKEVEVEGGLD 176
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 359 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 484
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 155 ASSPAKPALHIPEPLSTTNAATSS 84
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 359 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 484
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 155 ASSPAKPALHIPEPLSTTNAATSS 84
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 359 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 484
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 155 ASSPAKPALHIPEPLSTTNAATSS 84
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 359 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 484
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 155 ASSPAKPALHIPEPLSTTNAATSS 84
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF036692-6|AAB88328.1| 397|Caenorhabditis elegans Hypothetical
protein C44B12.5 protein.
Length = 397
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -3
Query: 266 TSFACASSPT*ESFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNA 96
TS+ A + S+ P P W G PT GA++ A PA P P++ +NA
Sbjct: 343 TSWGAAPAAPSTSWGAAPAAPPTWGGAPT--AAPTWGAANDAPPAA-TPAPVAASNA 396
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +3
Query: 180 RGKAPPSGRDGRYGTEGLLCRR*GTSKRG 266
RGKA +GRDGR G EG R +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 130 KAGFAGDDAPRAVFPSIVGRPRHQG 204
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,458,484
Number of Sequences: 27780
Number of extensions: 366215
Number of successful extensions: 1490
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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