Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0311
(668 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q99436 Cluster: Proteasome subunit beta type-7 precurso... 137 3e-31
UniRef50_Q7DLS1 Cluster: Proteasome subunit beta type-7-B precur... 135 1e-30
UniRef50_Q5TBG5 Cluster: Proteasome (Prosome, macropain) subunit... 126 6e-28
UniRef50_P25043 Cluster: Proteasome component PUP1 precursor; n=... 118 2e-25
UniRef50_P40306 Cluster: Proteasome subunit beta type-10 precurs... 117 3e-25
UniRef50_Q22X00 Cluster: Proteasome A-type and B-type family pro... 110 3e-23
UniRef50_UPI000049877C Cluster: proteasome beta subunit; n=1; En... 100 6e-20
UniRef50_O62102 Cluster: Proteasome subunit beta type; n=2; Caen... 99 1e-19
UniRef50_Q4UIA0 Cluster: Proteasome subunit beta type; n=8; Acon... 90 5e-17
UniRef50_A0CN28 Cluster: Proteasome subunit beta type; n=4; Para... 88 2e-16
UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2; Cryp... 85 1e-15
UniRef50_Q9UM79 Cluster: Protein serine kinase c17; n=25; Chorda... 85 1e-15
UniRef50_Q6E6B2 Cluster: Proteasome beta-type subunit-like prote... 83 6e-15
UniRef50_Q8T915 Cluster: AT05866p; n=1; Drosophila melanogaster|... 80 5e-14
UniRef50_Q7QVB7 Cluster: Proteasome subunit beta type; n=2; Giar... 78 2e-13
UniRef50_A2F2T6 Cluster: Proteasome subunit beta type; n=1; Tric... 75 2e-12
UniRef50_Q42353 Cluster: Proteasome component; n=1; Arabidopsis ... 75 2e-12
UniRef50_UPI00015A4F5D Cluster: Proteasome subunit beta type 10 ... 71 2e-11
UniRef50_Q8SQN7 Cluster: Proteasome subunit beta type; n=1; Ence... 70 4e-11
UniRef50_Q98S31 Cluster: Proteasome subunit beta type; n=1; Guil... 66 5e-10
UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2; Olig... 60 6e-08
UniRef50_A0D881 Cluster: Proteasome subunit beta type; n=1; Para... 56 8e-07
UniRef50_UPI000155C3B2 Cluster: PREDICTED: similar to proteasome... 53 5e-06
UniRef50_Q4QGU1 Cluster: Proteasome subunit beta type; n=7; Tryp... 53 7e-06
UniRef50_P28072 Cluster: Proteasome subunit beta type-6 precurso... 52 1e-05
UniRef50_Q5FW50 Cluster: Predicted; n=2; Murinae|Rep: Predicted ... 49 1e-04
UniRef50_A1RWY6 Cluster: Proteasome endopeptidase complex; n=1; ... 47 4e-04
UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precurso... 47 4e-04
UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;... 46 6e-04
UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:... 46 8e-04
UniRef50_Q7R530 Cluster: Proteasome subunit beta type; n=1; Giar... 46 0.001
UniRef50_P38624 Cluster: Proteasome component PRE3 precursor; n=... 46 0.001
UniRef50_Q4T9R8 Cluster: Chromosome undetermined SCAF7505, whole... 45 0.002
UniRef50_UPI00004991C1 Cluster: proteasome beta subunit; n=1; En... 43 0.006
UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;... 42 0.010
UniRef50_P28065 Cluster: Proteasome subunit beta type-9 precurso... 42 0.018
UniRef50_Q4TIB8 Cluster: Chromosome undetermined SCAF2267, whole... 40 0.072
UniRef50_A2E7Z2 Cluster: Proteasome subunit beta type; n=1; Tric... 39 0.095
UniRef50_A2DD57 Cluster: Proteasome subunit beta type; n=1; Tric... 39 0.095
UniRef50_Q980L4 Cluster: Proteasome subunit; n=4; Sulfolobaceae|... 39 0.095
UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A precur... 39 0.13
UniRef50_Q8SS01 Cluster: 26S PROTEASOME BETA-TYPE SUBUNIT; n=1; ... 38 0.17
UniRef50_Q9ZQR1 Cluster: Putative uncharacterized protein At2g14... 38 0.22
UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 38 0.22
UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2; Ostr... 37 0.51
UniRef50_A4RRA7 Cluster: Proteasome subunit beta type; n=2; Ostr... 37 0.51
UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;... 37 0.51
UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4; The... 36 0.88
UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1; Ence... 35 1.5
UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7; Halobac... 35 1.5
UniRef50_Q24QW7 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_A0LI50 Cluster: Extracellular solute-binding protein, f... 34 2.7
UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 34 3.6
UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2; ... 34 3.6
UniRef50_A7D1R0 Cluster: Proteasome endopeptidase complex; n=2; ... 34 3.6
UniRef50_UPI00015A6AB9 Cluster: UPI00015A6AB9 related cluster; n... 33 4.7
UniRef50_Q2J9Q3 Cluster: 20S proteasome, A and B subunits; n=23;... 33 4.7
UniRef50_A4BDN4 Cluster: Permease of the major facilitator super... 33 4.7
UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2; Cryp... 33 4.7
UniRef50_Q465F8 Cluster: Putative uncharacterized protein; n=1; ... 33 4.7
UniRef50_UPI0000004430 Cluster: hypothetical protein LOC446135; ... 33 6.2
UniRef50_A2DYG3 Cluster: F/Y-rich N-terminus family protein; n=1... 33 6.2
UniRef50_Q4P203 Cluster: Proteasome subunit beta type; n=1; Usti... 33 6.2
UniRef50_UPI0000E47CE3 Cluster: PREDICTED: hypothetical protein;... 33 8.2
UniRef50_A4VTS2 Cluster: Methyl-accepting chemotaxis protein; n=... 33 8.2
UniRef50_A1UHS7 Cluster: 20S proteasome, A and B subunits; n=19;... 33 8.2
UniRef50_Q8T8V8 Cluster: Proteasome subunit beta type; n=13; Neo... 33 8.2
UniRef50_Q8I0U7 Cluster: Proteasome, putative; n=5; Plasmodium|R... 33 8.2
UniRef50_A2BN27 Cluster: Proteasome beta; n=3; Desulfurococcales... 33 8.2
>UniRef50_Q99436 Cluster: Proteasome subunit beta type-7 precursor;
n=44; Fungi/Metazoa group|Rep: Proteasome subunit beta
type-7 precursor - Homo sapiens (Human)
Length = 277
Score = 137 bits (331), Expect = 3e-31
Identities = 72/128 (56%), Positives = 86/128 (67%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLK 438
VV+DKNC KIH+++ N+YCCGAGTAADT+MTTQ ++S LEL L TGR V TA +LK
Sbjct: 68 VVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLK 127
Query: 439 RMLFRYQGHIGAALVLGGVDRTGLIFTAFILMDL*INYHMQPWDLDPLAAMAVFEAGWKR 618
+MLFRYQG+IGAALVLGGVD TG + LAAMAVFE ++
Sbjct: 128 QMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRP 187
Query: 619 DMNEEEGK 642
DM EEE K
Sbjct: 188 DMEEEEAK 195
Score = 76.2 bits (179), Expect = 7e-13
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 4/65 (6%)
Frame = +2
Query: 71 MASALVPEIPVPGFSFENFQRNAFL----AQKGFPAPKATKTGTTIVGIIYADGVILGAD 238
MA+ V PV GFSF+N +RNA L A++G+ PK KTGTTI G++Y DG++LGAD
Sbjct: 1 MAAVSVYAPPVGGFSFDNCRRNAVLEADFAKRGYKLPKVRKTGTTIAGVVYKDGIVLGAD 60
Query: 239 TRATE 253
TRATE
Sbjct: 61 TRATE 65
>UniRef50_Q7DLS1 Cluster: Proteasome subunit beta type-7-B
precursor; n=28; Eukaryota|Rep: Proteasome subunit beta
type-7-B precursor - Arabidopsis thaliana (Mouse-ear
cress)
Length = 274
Score = 135 bits (326), Expect = 1e-30
Identities = 70/136 (51%), Positives = 82/136 (60%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLK 438
+V+DKNC+KIHY+A N+YCCGAGTAADTE T V+SQL L R TGR V TA TLLK
Sbjct: 64 IVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLK 123
Query: 439 RMLFRYQGHIGAALVLGGVDRTGLIFTAFILMDL*INYHMQPWDLDPLAAMAVFEAGWKR 618
+ LF YQGH+ AALVLGGVD TG LAAM+VFEA +K
Sbjct: 124 KHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKE 183
Query: 619 DMNEEEGKKACPRCYC 666
+ +EG K C
Sbjct: 184 GLTRDEGIKLVAEAIC 199
Score = 73.7 bits (173), Expect = 4e-12
Identities = 37/61 (60%), Positives = 43/61 (70%)
Frame = +2
Query: 71 MASALVPEIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRAT 250
M+ + V P GFSF+ +RN L QKG AP KTGTTIVG+I+ DGVILGADTRAT
Sbjct: 1 MSQSSVDIPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRAT 60
Query: 251 E 253
E
Sbjct: 61 E 61
>UniRef50_Q5TBG5 Cluster: Proteasome (Prosome, macropain) subunit,
beta type, 7; n=2; Euteleostomi|Rep: Proteasome
(Prosome, macropain) subunit, beta type, 7 - Homo
sapiens (Human)
Length = 210
Score = 126 bits (303), Expect = 6e-28
Identities = 58/83 (69%), Positives = 69/83 (83%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLK 438
VV+DKNC KIH+++ N+YCCGAGTAADT+MTTQ ++S LEL L TGR V TA +LK
Sbjct: 68 VVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLK 127
Query: 439 RMLFRYQGHIGAALVLGGVDRTG 507
+MLFRYQG+IGAALVLGGVD TG
Sbjct: 128 QMLFRYQGYIGAALVLGGVDVTG 150
Score = 76.2 bits (179), Expect = 7e-13
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 4/65 (6%)
Frame = +2
Query: 71 MASALVPEIPVPGFSFENFQRNAFL----AQKGFPAPKATKTGTTIVGIIYADGVILGAD 238
MA+ V PV GFSF+N +RNA L A++G+ PK KTGTTI G++Y DG++LGAD
Sbjct: 1 MAAVSVYAPPVGGFSFDNCRRNAVLEADFAKRGYKLPKVRKTGTTIAGVVYKDGIVLGAD 60
Query: 239 TRATE 253
TRATE
Sbjct: 61 TRATE 65
Score = 40.7 bits (91), Expect = 0.031
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3
Query: 510 HIYCIYPHGSVDKLPYATM 566
H+Y IYPHGS DKLPY TM
Sbjct: 152 HLYSIYPHGSTDKLPYVTM 170
>UniRef50_P25043 Cluster: Proteasome component PUP1 precursor; n=19;
Eukaryota|Rep: Proteasome component PUP1 precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 261
Score = 118 bits (283), Expect = 2e-25
Identities = 59/130 (45%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLK 438
+V+DKNC K+H ++ ++C GAGTAADTE TQ + S +EL L+T R V +A +LK
Sbjct: 54 IVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLK 113
Query: 439 RMLFRYQGHIGAALVLGGVDRTGL-IFTAFILMDL*INYHMQPWDLDPLAAMAVFEAGWK 615
+ LF+YQGHIGA L++ GVD TG +F+ + Y++ LAAMAV E+ WK
Sbjct: 114 QHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGSTDVGYYLS-LGSGSLAAMAVLESHWK 172
Query: 616 RDMNEEEGKK 645
+D+ +EE K
Sbjct: 173 QDLTKEEAIK 182
Score = 66.5 bits (155), Expect = 5e-10
Identities = 28/49 (57%), Positives = 38/49 (77%)
Frame = +2
Query: 107 GFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATE 253
G SF+N+QRN FLA+ PKAT TGTTIVG+ + +GV++ ADTR+T+
Sbjct: 3 GLSFDNYQRNNFLAENSHTQPKATSTGTTIVGVKFNNGVVIAADTRSTQ 51
>UniRef50_P40306 Cluster: Proteasome subunit beta type-10 precursor;
n=28; Eukaryota|Rep: Proteasome subunit beta type-10
precursor - Homo sapiens (Human)
Length = 273
Score = 117 bits (281), Expect = 3e-25
Identities = 50/85 (58%), Positives = 68/85 (80%)
Frame = +1
Query: 253 NTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATL 432
++VV+DK+C+KIH++A +YCCGAG AAD EMTT+ VAS++EL L TGR V T +
Sbjct: 62 DSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVATVTRI 121
Query: 433 LKRMLFRYQGHIGAALVLGGVDRTG 507
L++ LFRYQGH+GA+L++GGVD TG
Sbjct: 122 LRQTLFRYQGHVGASLIVGGVDLTG 146
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Frame = +2
Query: 98 PVPGFSFENFQRNAFLAQ--KGFPAPKATKTGTTIVGIIYADGVILGADTRAT 250
P GFSFEN QRNA L + G P A KTGTTI G+++ DGVILGADTRAT
Sbjct: 8 PRGGFSFENCQRNASLERVLPGLKVPHARKTGTTIAGLVFQDGVILGADTRAT 60
>UniRef50_Q22X00 Cluster: Proteasome A-type and B-type family
protein; n=2; Alveolata|Rep: Proteasome A-type and
B-type family protein - Tetrahymena thermophila SB210
Length = 282
Score = 110 bits (264), Expect = 3e-23
Identities = 54/127 (42%), Positives = 77/127 (60%)
Frame = +1
Query: 256 TVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLL 435
T+V++K+C KIHY+A NMYCCGAGTAADT+ T ++S+LEL RL+T R + A L
Sbjct: 64 TIVAEKSCSKIHYIAPNMYCCGAGTAADTQWVTDRLSSELELMRLNTNRQSRIAGAIARL 123
Query: 436 KRMLFRYQGHIGAALVLGGVDRTGLIFTAFILMDL*INYHMQPWDLDPLAAMAVFEAGWK 615
+ L++YQGH+GA L+LGG D G + LAA+A E+ ++
Sbjct: 124 REHLYQYQGHVGAHLILGGFDCQGPQLVSVAAHGSFSYLPYATMGSGCLAAIATLESRYR 183
Query: 616 RDMNEEE 636
D+ E+E
Sbjct: 184 DDLTEQE 190
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/49 (59%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +2
Query: 107 GFSFENFQRNAFLAQKGF-PAPKATKTGTTIVGIIYADGVILGADTRAT 250
GF+F+ RN L K +P TKTGTTIVG++Y DGV+LGADTRAT
Sbjct: 13 GFNFDLCLRNNELVSKQIVSSPHFTKTGTTIVGLVYKDGVVLGADTRAT 61
>UniRef50_UPI000049877C Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 262
Score = 99.5 bits (237), Expect = 6e-20
Identities = 52/129 (40%), Positives = 71/129 (55%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLK 438
+V+DK C K+H LA N+YC GAGTAAD T +A++L + R G+ V+TA T+LK
Sbjct: 52 IVADKACMKLHKLAPNIYCGGAGTAADLTHATNFIATKLGVHRFTIGQMPRVDTAVTMLK 111
Query: 439 RMLFRYQGHIGAALVLGGVDRTGLIFTAFILMDL*INYHMQPWDLDPLAAMAVFEAGWKR 618
R LF Y GHIGA LV+GG D TG ++ +AA + + W
Sbjct: 112 RHLFPYGGHIGAYLVVGGYDYTGAHLWGVYADGSTSQHNYYSLGSGSIAATTMLDDQWNE 171
Query: 619 DMNEEEGKK 645
++ EEG K
Sbjct: 172 NLTREEGVK 180
>UniRef50_O62102 Cluster: Proteasome subunit beta type; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type -
Caenorhabditis elegans
Length = 277
Score = 98.7 bits (235), Expect = 1e-19
Identities = 50/133 (37%), Positives = 75/133 (56%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLK 438
+++DK+C+K+H L ++Y CGAGTAAD + T+ ++ L L L+TGR V TA K
Sbjct: 71 IIADKHCEKVHKLTESIYACGAGTAADLDQVTKMLSGNLRLLELNTGRKARVITALRQAK 130
Query: 439 RMLFRYQGHIGAALVLGGVDRTGLIFTAFILMDL*INYHMQPWDLDPLAAMAVFEAGWKR 618
+ LF YQG+IGA L++GGVD TG + + AA+ + E +K
Sbjct: 131 QHLFNYQGYIGAYLLIGGVDPTGPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKV 190
Query: 619 DMNEEEGKKACPR 657
DM ++E +K R
Sbjct: 191 DMTKDEAEKLVQR 203
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = +2
Query: 110 FSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRAT 250
F F N RN + + G APK T TGTTIV + + G+++GAD+RAT
Sbjct: 21 FDFSNCIRNQAMCKMGGKAPKLTSTGTTIVAVAFKGGLVMGADSRAT 67
>UniRef50_Q4UIA0 Cluster: Proteasome subunit beta type; n=8;
Aconoidasida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 271
Score = 89.8 bits (213), Expect = 5e-17
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLK 438
+V+DKNC K+H ++ N+YC GAG AAD E TT +A+ +EL RL+T + V+ ++L
Sbjct: 65 IVADKNCSKLHKISDNIYCAGAGVAADLEHTTLWLANNIELHRLNTKKAPRVQMCISMLV 124
Query: 439 RMLFRYQGHIGAALVLGGVDRTG 507
LF+YQG+ AL+LGG D TG
Sbjct: 125 HELFKYQGYKQCALILGGFDYTG 147
Score = 46.0 bits (104), Expect = 8e-04
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +2
Query: 107 GFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATE 253
G+ F N+ RN+ + Q KTGTTI G++ D V+L ADTRAT+
Sbjct: 15 GWDFSNYSRNSRI-QNSISGHNYLKTGTTICGVMGRDSVVLAADTRATQ 62
>UniRef50_A0CN28 Cluster: Proteasome subunit beta type; n=4;
Paramecium tetraurelia|Rep: Proteasome subunit beta type
- Paramecium tetraurelia
Length = 275
Score = 87.8 bits (208), Expect = 2e-16
Identities = 45/127 (35%), Positives = 71/127 (55%)
Frame = +1
Query: 256 TVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLL 435
++V+DKNC+K+H LA N++ GAGTAAD ++L+LQRL+ R V T L
Sbjct: 63 SIVADKNCEKLHPLAPNIWAAGAGTAADLHHQCAHFNAKLKLQRLNLNRQSRVNEVITKL 122
Query: 436 KRMLFRYQGHIGAALVLGGVDRTGLIFTAFILMDL*INYHMQPWDLDPLAAMAVFEAGWK 615
LF Y+GHIG AL++GG+D G + + + Q LAA+ + EA ++
Sbjct: 123 TAKLFPYRGHIGVALIIGGIDSNGPQLASVSPHGNYVYHPFQSMGSGSLAALGILEAKFQ 182
Query: 616 RDMNEEE 636
+ +++
Sbjct: 183 DGLTKQQ 189
Score = 56.0 bits (129), Expect = 8e-07
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +2
Query: 107 GFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRAT 250
G+ + N +RN + +GF TKTGTTIVG+I+ GV++ ADTRAT
Sbjct: 13 GYDYTNVKRNELMKAQGFKEMPFTKTGTTIVGVIFDGGVVMAADTRAT 60
>UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 279
Score = 85.4 bits (202), Expect = 1e-15
Identities = 44/126 (34%), Positives = 67/126 (53%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLK 438
+V+DK+C+KIH L+ N++ GAGTAAD + T + LELQ+L R V A ++L
Sbjct: 66 IVADKDCEKIHRLSDNIFAAGAGTAADLDHVTSLIEGNLELQKLQMNRKPRVAHAVSMLS 125
Query: 439 RMLFRYQGHIGAALVLGGVDRTGLIFTAFILMDL*INYHMQPWDLDPLAAMAVFEAGWKR 618
L++YQG+IGA L++ G D TG + L A ++ EA ++
Sbjct: 126 DHLYKYQGYIGAHLIVAGSDSTGNFVFQVSANGCIMQLPFTSMGSGSLCARSILEARYRD 185
Query: 619 DMNEEE 636
+ E E
Sbjct: 186 GLTESE 191
Score = 42.3 bits (95), Expect = 0.010
Identities = 27/58 (46%), Positives = 30/58 (51%)
Frame = +2
Query: 77 SALVPEIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRAT 250
+A E GF FEN A K KTGTTIVG+ D V+LGADTRAT
Sbjct: 6 NAYFSEKSTNGFLFENNIATAPCLSDSTEL-KTVKTGTTIVGVACNDCVVLGADTRAT 62
>UniRef50_Q9UM79 Cluster: Protein serine kinase c17; n=25;
Chordata|Rep: Protein serine kinase c17 - Homo sapiens
(Human)
Length = 143
Score = 85.0 bits (201), Expect = 1e-15
Identities = 42/77 (54%), Positives = 53/77 (68%)
Frame = +1
Query: 268 DKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRML 447
D C KIH+++ N+YCCGAGTA DT+MTTQ ++S LEL L TGR V TA + +
Sbjct: 67 DNGCSKIHFISPNIYCCGAGTA-DTDMTTQLISSNLELHSLSTGRLPRVVTAKSDAEADA 125
Query: 448 FRYQGHIGAALVLGGVD 498
F+ +GAALVLGGVD
Sbjct: 126 FQVSRLLGAALVLGGVD 142
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
Frame = +2
Query: 98 PVPGFSFENFQR----NAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADT 241
PV GFSF+N +R L +G+ PKA KTGTTI G++Y DG++LGADT
Sbjct: 6 PVGGFSFDNCRRMPSWKPILQMRGYKLPKARKTGTTIAGVVYKDGIVLGADT 57
>UniRef50_Q6E6B2 Cluster: Proteasome beta-type subunit-like protein;
n=1; Antonospora locustae|Rep: Proteasome beta-type
subunit-like protein - Antonospora locustae (Nosema
locustae)
Length = 190
Score = 83.0 bits (196), Expect = 6e-15
Identities = 46/83 (55%), Positives = 51/83 (61%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLK 438
VV DKNC K+H LA ++C GAGTAADTE T S A L L R R V TA L
Sbjct: 45 VVEDKNCFKLHQLADTIHCAGAGTAADTEHLTASCARFLILFRRKYCREPFVHTAQRFLC 104
Query: 439 RMLFRYQGHIGAALVLGGVDRTG 507
L RY+G IGAAL+L GVD TG
Sbjct: 105 NHLHRYRGEIGAALILAGVDCTG 127
Score = 39.1 bits (87), Expect = 0.095
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +2
Query: 164 APKATKTGTTIVGIIYADGVILGADTRAT 250
APK KTGTTIVG+ +A GV L ADTRAT
Sbjct: 15 APK--KTGTTIVGLRFAGGVALFADTRAT 41
>UniRef50_Q8T915 Cluster: AT05866p; n=1; Drosophila
melanogaster|Rep: AT05866p - Drosophila melanogaster
(Fruit fly)
Length = 322
Score = 79.8 bits (188), Expect = 5e-14
Identities = 37/84 (44%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTG-RTVPVETAATLL 435
+V K C+KI L +N++ GAGTA DT+ + +QLEL R++TG R VPV A ++
Sbjct: 74 IVFSKTCRKIIELQANIFAAGAGTARDTKALVELTRAQLELHRMNTGFRKVPVCCANQMI 133
Query: 436 KRMLFRYQGHIGAALVLGGVDRTG 507
+++LFR+ G+I A +++GG D TG
Sbjct: 134 RQLLFRFNGNIDADMIIGGADNTG 157
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/48 (50%), Positives = 34/48 (70%)
Frame = +2
Query: 107 GFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRAT 250
GF+F+N RN L + G P + TGTT+VGI++ GVI+GA++RAT
Sbjct: 23 GFTFDNCLRNKQLKENGLEEPNSFTTGTTVVGIVFDGGVIIGAESRAT 70
>UniRef50_Q7QVB7 Cluster: Proteasome subunit beta type; n=2; Giardia
intestinalis|Rep: Proteasome subunit beta type - Giardia
lamblia ATCC 50803
Length = 273
Score = 78.2 bits (184), Expect = 2e-13
Identities = 50/135 (37%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLK 438
VV +KN +K+ + MY GAGTAADT + AS L L TGR V++A L+
Sbjct: 92 VVMNKNKKKLVCINEQMYMAGAGTAADTAAVGRMAASSLRLHAYKTGRKPLVQSAVKLIS 151
Query: 439 RMLFRYQGHIGAALVLGGVDRTGLIFTAFILMDL*INYHMQPWDLD---PLAAMAVFEAG 609
LFRY G++ A +++ GVD G + +D + QP+ D LAA ++ E
Sbjct: 152 DHLFRYMGYVSAYVIIAGVDYKGAHLCS---IDAHGSITAQPFVTDGSGRLAAQSMLEKH 208
Query: 610 WKRDMNEEEGKK-AC 651
WK DM E + + AC
Sbjct: 209 WKPDMEENDAVECAC 223
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +2
Query: 101 VPGFSFENFQRNAFLAQKGFP--APKATKTGTTIVGIIYADGVILGADTRAT 250
V SFEN +RNA L Q + KTGTTI+G+ + GVIL ADTR+T
Sbjct: 37 VAPLSFENCKRNAQLPQDFLAECSKSFKKTGTTIMGLTFKGGVILAADTRST 88
>UniRef50_A2F2T6 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 275
Score = 74.9 bits (176), Expect = 2e-12
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLK 438
+V+ K+ K+HY++ N++ CGAG AAD + ++++L L +++TG V+ +L
Sbjct: 56 IVAVKDEMKLHYISDNIWVCGAGIAADNDNINAVISAKLRLFQMNTGLQPRVDQCTNILA 115
Query: 439 RMLFRYQGHIGAALVLGGVDRTGLIFTAFILMDL*INYHMQPW---DLDPLAAMAVFEAG 609
LF+Y G+I AAL++GG+D G + ++ QP+ LAA++V E
Sbjct: 116 SRLFQYMGYIQAALIVGGIDFQG---PQVYQVAPHGSFSKQPFIAQGSGSLAAISVLENR 172
Query: 610 WKRDMNEEE 636
W MNE +
Sbjct: 173 WHNKMNEHD 181
Score = 49.6 bits (113), Expect = 7e-05
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +2
Query: 107 GFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRAT 250
GF F N+ RN L K P+ TGTTI I+ GV+LGADTRAT
Sbjct: 6 GFDFSNYARNKSLEPK-LGKPQLLSTGTTIAAAIFDGGVVLGADTRAT 52
>UniRef50_Q42353 Cluster: Proteasome component; n=1; Arabidopsis
thaliana|Rep: Proteasome component - Arabidopsis
thaliana (Mouse-ear cress)
Length = 116
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/61 (60%), Positives = 43/61 (70%)
Frame = +2
Query: 71 MASALVPEIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRAT 250
M+ + V P GFSF+ +RN L QKG AP KTGTTIVG+I+ DGVILGADTRAT
Sbjct: 1 MSQSTVDVPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRAT 60
Query: 251 E 253
E
Sbjct: 61 E 61
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGA-GTAADTEMTTQSVASQLELQRL 390
+V+DKNC+KIHY+A N+YCC + T V+SQL L L
Sbjct: 64 IVADKNCEKIHYMAPNIYCCACRNCGLILKQVTDMVSSQLRLHPL 108
>UniRef50_UPI00015A4F5D Cluster: Proteasome subunit beta type 10
precursor (EC 3.4.25.1) (Proteasome MECl-1) (Macropain
subunit MECl-1) (Multicatalytic endopeptidase complex
subunit MECl-1).; n=3; Danio rerio|Rep: Proteasome
subunit beta type 10 precursor (EC 3.4.25.1) (Proteasome
MECl-1) (Macropain subunit MECl-1) (Multicatalytic
endopeptidase complex subunit MECl-1). - Danio rerio
Length = 283
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/53 (64%), Positives = 42/53 (79%), Gaps = 4/53 (7%)
Frame = +2
Query: 107 GFSFENFQRNAFL----AQKGFPAPKATKTGTTIVGIIYADGVILGADTRATE 253
GFSFEN +RNA L ++KG+ AP A KTGTTI G+++ DGVILGADTRAT+
Sbjct: 12 GFSFENTRRNAVLEANLSEKGYSAPNARKTGTTIAGLVFKDGVILGADTRATD 64
Score = 40.3 bits (90), Expect = 0.041
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQR--LHTGRTVPVETAATL 432
VV+DKNC KIHY+A N+Y D +T ++A + L+ R ++
Sbjct: 67 VVADKNCMKIHYIAPNIYSLNIPRLPDRHHSTLNIARLPDHHHSSLNIARLPDHHHSSLN 126
Query: 433 LKRMLFRYQGHIGAALVLGGVD 498
+ R+ +Q + AL+L D
Sbjct: 127 IARLPDHHQSSLNIALILQSFD 148
>UniRef50_Q8SQN7 Cluster: Proteasome subunit beta type; n=1;
Encephalitozoon cuniculi|Rep: Proteasome subunit beta
type - Encephalitozoon cuniculi
Length = 227
Score = 70.1 bits (164), Expect = 4e-11
Identities = 35/83 (42%), Positives = 47/83 (56%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLK 438
VVSDKNC KIH + + CCGAGTAAD + + +L L + R V +
Sbjct: 31 VVSDKNCVKIHQITDKIMCCGAGTAADASRVARMASRELRLFQNKYLRLPLVSHFRKVCT 90
Query: 439 RMLFRYQGHIGAALVLGGVDRTG 507
+ L +Y G IGAAL++GG+D G
Sbjct: 91 QHLHKYGGGIGAALIVGGIDSEG 113
Score = 41.9 bits (94), Expect = 0.013
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +2
Query: 176 TKTGTTIVGIIYADGVILGADTRATE 253
TKTGTTIVG+ Y GVIL ADTR+T+
Sbjct: 3 TKTGTTIVGMKYKTGVILAADTRSTQ 28
>UniRef50_Q98S31 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 236
Score = 66.5 bits (155), Expect = 5e-10
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLK 438
+ +D +C+KIH++ +N+ CGAGT+AD + + + L + +E +++
Sbjct: 59 ITNDSSCKKIHFIGNNIGICGAGTSADIQNIINYLKININFLNLEKLKETNLEECTKIIQ 118
Query: 439 RMLFRYQGHIGAALVLGGVDRTGL-IFTAFILMDL*INYHMQPWDLDPLAAMAVFEAGWK 615
LF Y+G I AAL++GG D GL +++ + + N+ + AAM + E +
Sbjct: 119 NFLFNYKGMISAALIIGGFDYYGLNLYSIYPDGSMDKNFFIS-MGSGSFAAMTILEKNYN 177
Query: 616 RDMNEE 633
M+ E
Sbjct: 178 EIMSLE 183
Score = 35.9 bits (79), Expect = 0.88
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 170 KATKTGTTIVGIIYADGVILGADTRAT 250
K KTGTTI+GI + ++L ADTR+T
Sbjct: 29 KVDKTGTTIIGICIKNHIVLAADTRST 55
>UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2;
Oligohymenophorea|Rep: Proteasome subunit beta type -
Tetrahymena thermophila SB210
Length = 227
Score = 59.7 bits (138), Expect = 6e-08
Identities = 25/79 (31%), Positives = 47/79 (59%)
Frame = +1
Query: 262 VSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKR 441
++D+ K+ YL +YC +G+AADT+ V L++ + R V+TAA L
Sbjct: 51 IADRAQDKVDYLHERIYCLRSGSAADTQTLCSYVRYYLDVHSMELQRRPTVKTAAKLFSN 110
Query: 442 MLFRYQGHIGAALVLGGVD 498
++++YQ ++ AA+++ G+D
Sbjct: 111 LIYQYQDNLSAAVIVAGID 129
Score = 35.9 bits (79), Expect = 0.88
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 116 FENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRAT 250
F+ Q + + F A TGT+I+ ++Y GV++GAD+R T
Sbjct: 2 FKTVQSDIQMLPDPFDYKHAESTGTSIMALVYDGGVLVGADSRTT 46
>UniRef50_A0D881 Cluster: Proteasome subunit beta type; n=1;
Paramecium tetraurelia|Rep: Proteasome subunit beta type
- Paramecium tetraurelia
Length = 206
Score = 56.0 bits (129), Expect = 8e-07
Identities = 25/79 (31%), Positives = 44/79 (55%)
Frame = +1
Query: 262 VSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKR 441
V+D+ KI Y+ ++C +G AADT++ T+ V ++ GR V TAA L +
Sbjct: 43 VADRCADKIDYIHDRIFCLRSGAAADTQIITKHVRYYVDAHAQELGRLPAVATAANLFRN 102
Query: 442 MLFRYQGHIGAALVLGGVD 498
L+ Y+ + A++++ G D
Sbjct: 103 FLYEYKDSMSASIIVAGWD 121
Score = 33.9 bits (74), Expect = 3.6
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2
Query: 182 TGTTIVGIIYADGVILGADTRATEIQ 259
TGTTI+ +IY G+I+GAD+R + Q
Sbjct: 16 TGTTIMAVIYDGGLIIGADSRTSSGQ 41
>UniRef50_UPI000155C3B2 Cluster: PREDICTED: similar to proteasome
beta 7 subunit proprotein; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to proteasome beta 7
subunit proprotein - Ornithorhynchus anatinus
Length = 206
Score = 53.2 bits (122), Expect = 5e-06
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Frame = +2
Query: 71 MASALVPEIPVPGFSFENFQRNAFL----AQKGFPAPKATKTGTTIVGIIYA--DGVILG 232
MA+ V P+ GFSF+N +RNA L A+KG P A KTGTTI G++Y +G++LG
Sbjct: 1 MAAVSVCSPPLGGFSFDNCRRNAALEAEFAKKGHKLPAARKTGTTIAGVVYKVNEGIVLG 60
Score = 50.0 bits (114), Expect = 5e-05
Identities = 31/64 (48%), Positives = 35/64 (54%)
Frame = +1
Query: 454 YQGHIGAALVLGGVDRTGLIFTAFILMDL*INYHMQPWDLDPLAAMAVFEAGWKRDMNEE 633
YQG+IGAALVLGGVD TG + LAAMAVFE +K DM EE
Sbjct: 62 YQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDNFKPDMEEE 121
Query: 634 EGKK 645
E K+
Sbjct: 122 EAKQ 125
Score = 40.7 bits (91), Expect = 0.031
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3
Query: 510 HIYCIYPHGSVDKLPYATM 566
H+Y IYPHGS DKLPY TM
Sbjct: 81 HLYSIYPHGSTDKLPYVTM 99
>UniRef50_Q4QGU1 Cluster: Proteasome subunit beta type; n=7;
Trypanosomatidae|Rep: Proteasome subunit beta type -
Leishmania major
Length = 283
Score = 52.8 bits (121), Expect = 7e-06
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = +1
Query: 256 TVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLL 435
T V ++ K+ L +YCC +G+AADT+ + V++ L + G V V TAA L
Sbjct: 78 TYVVNRASNKLTKLTEKIYCCRSGSAADTQALAERVSNYLGSYQTDIGADVNVATAANLF 137
Query: 436 KRMLFRYQGHIGAALVLGGVD 498
+M + + +I A +++ G D
Sbjct: 138 HKMCYVNRWNISAGIIVAGYD 158
>UniRef50_P28072 Cluster: Proteasome subunit beta type-6 precursor;
n=43; Bilateria|Rep: Proteasome subunit beta type-6
precursor - Homo sapiens (Human)
Length = 239
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/79 (29%), Positives = 43/79 (54%)
Frame = +1
Query: 262 VSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKR 441
++++ K+ + ++CC +G+AADT+ +V QL + V TAA+L K
Sbjct: 60 IANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKE 119
Query: 442 MLFRYQGHIGAALVLGGVD 498
M +RY+ + A +++ G D
Sbjct: 120 MCYRYREDLMAGIIIAGWD 138
Score = 32.7 bits (71), Expect = 8.2
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 170 KATKTGTTIVGIIYADGVILGADTRAT 250
+ TGTTI+ + + GV+LGAD+R T
Sbjct: 29 REVSTGTTIMAVQFDGGVVLGADSRTT 55
>UniRef50_Q5FW50 Cluster: Predicted; n=2; Murinae|Rep: Predicted -
Mus musculus (Mouse)
Length = 103
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/40 (62%), Positives = 28/40 (70%)
Frame = +1
Query: 388 LHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVDRTG 507
L TG V TA +LK+MLFRYQG+IGA LVL VD TG
Sbjct: 31 LFTGHLPRVVTANRMLKQMLFRYQGYIGATLVLRRVDSTG 70
Score = 39.9 bits (89), Expect = 0.054
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +3
Query: 309 VLLWSRNSS*H*NDNTICCFTIGVAALTYWTYCTSRNCCHTAETNAISLSRPYRGCS-GF 485
+LLWS +S H DN F +G AL + + + + + Y G +
Sbjct: 6 LLLWSWDSCKHRYDNPAYFFQLG--ALLFTGHLPRVVTANRMLKQMLFRYQGYIGATLVL 63
Query: 486 GRC*QNRSHIYCIYPHGSVDKLPYATM 566
R H+Y IYPHGS DK PY T+
Sbjct: 64 RRVDSTGPHLYSIYPHGSTDKSPYVTV 90
>UniRef50_A1RWY6 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 200
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/82 (28%), Positives = 44/82 (53%)
Frame = +1
Query: 262 VSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKR 441
+++K KI + S++ AGT D + + + + TG ++PV++ ATL
Sbjct: 38 IANKQTWKIVEIDSHIAATIAGTVGDAQQLVDRLRVEARYYKTITGDSMPVKSVATLASL 97
Query: 442 MLFRYQGHIGAALVLGGVDRTG 507
+LF+Y+ + +++GGVD G
Sbjct: 98 ILFQYRPILSVQMLIGGVDSDG 119
>UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precursor;
n=14; Magnoliophyta|Rep: Proteasome subunit beta type-6
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 233
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/80 (26%), Positives = 44/80 (55%)
Frame = +1
Query: 262 VSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKR 441
V+++ KI L N+Y C +G+AAD+++ + V L + G+ V+ +A L++
Sbjct: 38 VANRASDKITQLTDNVYVCRSGSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRM 97
Query: 442 MLFRYQGHIGAALVLGGVDR 501
+ + + + L++GG D+
Sbjct: 98 LAYNNKNMLQTGLIVGGWDK 117
Score = 34.3 bits (75), Expect = 2.7
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 185 GTTIVGIIYADGVILGADTRAT 250
GTTI+G+ Y GV+LGAD+R +
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTS 33
>UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Methanococcus jannaschii
Length = 224
Score = 46.4 bits (105), Expect = 6e-04
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLK 438
+V+DK +K++ + + AG+ D + + + ++ +L ++ TGR +P ATLL
Sbjct: 31 LVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLS 90
Query: 439 RMLFRYQGH-IGAALVLGGVD--RTGLIFTAFILMDL*INYHMQPWDLDPLAAMAVFEAG 609
+L + +++GG D +F+ L + A V EAG
Sbjct: 91 NILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAG 150
Query: 610 WKRDMNEEEGKK 645
+ RDM+ EEG K
Sbjct: 151 YDRDMSVEEGIK 162
>UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:
NEQ203 - Nanoarchaeum equitans
Length = 196
Score = 46.0 bits (104), Expect = 8e-04
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLK 438
+V DK QKI + + G+GT AD + + + ++L+L+ L++ RT+ V AA LL
Sbjct: 26 IVEDKRAQKIIPITDYILLAGSGTVADLQHIAKILKTELKLRELYSRRTMNVIEAANLLS 85
Query: 439 RMLFRYQGHIG-AALVLGG 492
+L++ + ++ L++ G
Sbjct: 86 HLLYQNRFYLNPLGLLIAG 104
>UniRef50_Q7R530 Cluster: Proteasome subunit beta type; n=1; Giardia
lamblia ATCC 50803|Rep: Proteasome subunit beta type -
Giardia lamblia ATCC 50803
Length = 191
Score = 45.6 bits (103), Expect = 0.001
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQR--LHT---GRTVPVETA 423
+V D+ K+ + +Y C AG+ + + V + L Q+ LH G V TA
Sbjct: 20 LVVDRFIPKVLPITDKIYTCIAGSVSHAQFLVNEVRAHLMTQQMDLHANLNGMDPMVATA 79
Query: 424 ATLLKRMLFRYQGHIGAALVLGGVDRTG 507
A ++ L +Y+ + AA +LGGVD TG
Sbjct: 80 ANIISIYLHKYREFLHAAFILGGVDNTG 107
>UniRef50_P38624 Cluster: Proteasome component PRE3 precursor; n=35;
Eukaryota|Rep: Proteasome component PRE3 precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 215
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/79 (27%), Positives = 43/79 (54%)
Frame = +1
Query: 262 VSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKR 441
++++ K+ + ++CC +G+AADT+ V LEL G T ETAA++ K
Sbjct: 45 IANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYG-TPSTETAASVFKE 103
Query: 442 MLFRYQGHIGAALVLGGVD 498
+ + + ++ A +++ G D
Sbjct: 104 LCYENKDNLTAGIIVAGYD 122
Score = 33.1 bits (72), Expect = 6.2
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 185 GTTIVGIIYADGVILGADTRAT 250
GT+I+ + + DGVILGAD+R T
Sbjct: 19 GTSIMAVTFKDGVILGADSRTT 40
>UniRef50_Q4T9R8 Cluster: Chromosome undetermined SCAF7505, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7505,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 86
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Frame = +2
Query: 71 MASALVPEIPVPGFSFENFQRNAFL----AQKGFPAPKATKTGTTIVGIIY 211
MA+ V PV GF F+N +RNA L + G+ P A KTGTTI G+++
Sbjct: 1 MAALAVRTAPVGGFGFQNCRRNAHLEAEATKVGYSFPSARKTGTTICGLVF 51
>UniRef50_UPI00004991C1 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 43.2 bits (97), Expect = 0.006
Identities = 23/81 (28%), Positives = 42/81 (51%)
Frame = +1
Query: 256 TVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLL 435
++V ++ KI ++ ++ C AGTAA +E V L + TG V AAT +
Sbjct: 38 SIVVNRCKNKIRMVSDSIGMCTAGTAAHSETIGDYVKHALRMYTAQTGEEPTVLAAATSI 97
Query: 436 KRMLFRYQGHIGAALVLGGVD 498
K +++ + + +++V GG D
Sbjct: 98 KNIIYGNKSFLSSSVVCGGYD 118
Score = 34.3 bits (75), Expect = 2.7
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 185 GTTIVGIIYADGVILGADTRAT 250
GTTI+G++Y GV+LGAD R +
Sbjct: 14 GTTIIGVVYNGGVLLGADGRTS 35
>UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;
Thermoplasmatales|Rep: Proteasome subunit beta precursor
- Thermoplasma acidophilum
Length = 211
Score = 42.3 bits (95), Expect = 0.010
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +1
Query: 262 VSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKR 441
+ KN +K+ + + AG D ++ + + ++LEL RL +P+E ATLL
Sbjct: 34 IMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSN 93
Query: 442 ML--FRYQGHIGAALVLGGVDRTGLIFT 519
ML +Y ++ L++GG+D +F+
Sbjct: 94 MLNQVKYMPYM-VQLLVGGIDTAPHVFS 120
>UniRef50_P28065 Cluster: Proteasome subunit beta type-9 precursor;
n=79; Eumetazoa|Rep: Proteasome subunit beta type-9
precursor - Homo sapiens (Human)
Length = 219
Score = 41.5 bits (93), Expect = 0.018
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +1
Query: 283 KIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQG 462
K+ L +YC +G+AAD + A QLEL + V AA +++ + ++Y+
Sbjct: 53 KLSPLHERIYCALSGSAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYRE 112
Query: 463 HIGAALVLGGVDR 501
+ A L++ G D+
Sbjct: 113 DLSAHLMVAGWDQ 125
>UniRef50_Q4TIB8 Cluster: Chromosome undetermined SCAF2267, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF2267,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 202
Score = 39.5 bits (88), Expect = 0.072
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 262 VSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTV 408
VS K K+ + ++CC AG+ AD + T++ QL R HT + V
Sbjct: 27 VSSKTINKVIKVHDRIFCCMAGSLADAQAVTKAAKFQLSFHRSHTSKPV 75
>UniRef50_A2E7Z2 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 216
Score = 39.1 bits (87), Expect = 0.095
Identities = 25/130 (19%), Positives = 56/130 (43%), Gaps = 2/130 (1%)
Frame = +1
Query: 262 VSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRT--VPVETAATLL 435
+ ++ KI + ++ G AADT+ ++V + L + T + A+ ++
Sbjct: 38 IPNRATNKITEIQPKIFAARCGNAADTQFLARAVKNYLNALNITRENTDDSTILVASNVI 97
Query: 436 KRMLFRYQGHIGAALVLGGVDRTGLIFTAFILMDL*INYHMQPWDLDPLAAMAVFEAGWK 615
+ ++ RY+ ++ A +++GG D G + + + I + A + ++
Sbjct: 98 RSLIVRYRQYLSAGVIVGGWDSAGPQVYSIEVSGMAIKKKIASNGSGSTYIQAYIDQNYR 157
Query: 616 RDMNEEEGKK 645
DM EE K
Sbjct: 158 EDMTMEEATK 167
>UniRef50_A2DD57 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 256
Score = 39.1 bits (87), Expect = 0.095
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 VSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKR 441
+ + KI LA NM AG AAD + ++++ ++L + + + V A+ +L
Sbjct: 79 IFSQTVMKILPLAPNMIGTMAGGAADCQYWLRNLSRLIQLHKFRYQQPLTVAAASKILVN 138
Query: 442 MLFRYQGH-IGAALVLGGVDRTG 507
L+RY+G+ + ++ G D TG
Sbjct: 139 ELYRYKGYNLSIGSMICGYDNTG 161
>UniRef50_Q980L4 Cluster: Proteasome subunit; n=4;
Sulfolobaceae|Rep: Proteasome subunit - Sulfolobus
solfataricus
Length = 196
Score = 39.1 bits (87), Expect = 0.095
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 VSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKR 441
V K +K+ Y + GAG D + T+ + +++ + TG+ + V AA LL
Sbjct: 31 VLSKQAKKV-YKINKFLMAGAGIYGDLQTLTRIMNVEIKYYEVSTGKPISVHAAAKLLSV 89
Query: 442 MLFRYQ-GHIGAALVLGGVDRTG 507
+L++Y+ + ++ GGVD G
Sbjct: 90 ILYQYKVMPFISEILFGGVDEKG 112
>UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A
precursor; n=13; Viridiplantae|Rep: Proteasome subunit
beta type-5-A precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 274
Score = 38.7 bits (86), Expect = 0.13
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 VSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKR 441
+S ++ +KI + M AG AAD + +++ + L L R + V A+ LL
Sbjct: 83 ISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLAN 142
Query: 442 MLFRYQG-HIGAALVLGGVDRTG 507
ML+ Y+G + ++ G D TG
Sbjct: 143 MLYSYRGMGLSVGTMIAGWDETG 165
>UniRef50_Q8SS01 Cluster: 26S PROTEASOME BETA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 235
Score = 38.3 bits (85), Expect = 0.17
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 155 GFPAPKATKTGTTIVGIIYADGVILGADTRATEIQLSR 268
G P + TGTT+V Y DG+I+GADTR + +L++
Sbjct: 6 GAPKMRDFVTGTTVVSFRYRDGIIMGADTRGSYGRLAK 43
>UniRef50_Q9ZQR1 Cluster: Putative uncharacterized protein
At2g14490; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein At2g14490 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 142
Score = 37.9 bits (84), Expect = 0.22
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYC 315
+V+DKNC KIHY+A N+YC
Sbjct: 124 IVADKNCGKIHYMAPNIYC 142
>UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 203
Score = 37.9 bits (84), Expect = 0.22
Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 3/132 (2%)
Frame = +1
Query: 262 VSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKR 441
+ +N +KI + + AG D + V Q+ L L TG+ V A L
Sbjct: 31 ILSRNFKKIFVINDRIGIAFAGLYGDMGGLVRIVEGQMRLASLETGKPATVRNVAKFLSS 90
Query: 442 MLFRYQGH-IGAALVLGGVDRTG--LIFTAFILMDL*INYHMQPWDLDPLAAMAVFEAGW 612
+L+ Y+ ++GG+D G ++ L + I A + E +
Sbjct: 91 LLYSYKFFPFNVEAIVGGIDPGGEPKLYVLDPLGSI-IEEDYVAAGTGATTAFGLLEHVY 149
Query: 613 KRDMNEEEGKKA 648
KR M+ EE KKA
Sbjct: 150 KRGMSLEEAKKA 161
>UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2;
Ostreococcus|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 265
Score = 36.7 bits (81), Expect = 0.51
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 164 APKATKTGTTIVGIIYADGVILGADTRAT 250
AP + TTI+ + YADGV+LGAD+R +
Sbjct: 42 APPRARAQTTIMAVKYADGVVLGADSRTS 70
>UniRef50_A4RRA7 Cluster: Proteasome subunit beta type; n=2;
Ostreococcus|Rep: Proteasome subunit beta type -
Ostreococcus lucimarinus CCE9901
Length = 246
Score = 36.7 bits (81), Expect = 0.51
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 164 APKATKTGTTIVGIIYADGVILGADTRAT 250
A +A TGTTIV YA GV+LGAD+R +
Sbjct: 10 ASEAPHTGTTIVACEYAGGVVLGADSRVS 38
>UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;
Thermococcaceae|Rep: Proteasome subunit beta precursor -
Pyrococcus abyssi
Length = 207
Score = 36.7 bits (81), Expect = 0.51
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLK 438
+V KN KIH + ++ GAG D + + ++ +L +G+ + V+ ATLL
Sbjct: 35 IVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLA 94
Query: 439 RML--FRYQGHIGAALVLGGVDRTGLIFTAFILMDL*INYHMQPWDLDPLAAMAVFEAGW 612
ML R ++ A ++GG D +++ ++ + + ++ A +V ++ +
Sbjct: 95 NMLNGARMLPYL-AWFLVGGFDEKPRLYSVDMMGGITEDKYVAAGS-GMEFAYSVLDSEY 152
Query: 613 KRDMNEEEGKK 645
+ D+ EG K
Sbjct: 153 REDLKVREGIK 163
Score = 33.5 bits (73), Expect = 4.7
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 185 GTTIVGIIYADGVILGADTRAT 250
GTT VGI+ +DGV+L AD RA+
Sbjct: 10 GTTTVGIVCSDGVVLAADRRAS 31
>UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4;
Thermococcaceae|Rep: PsmB proteasome, subunit beta -
Pyrococcus abyssi
Length = 197
Score = 35.9 bits (79), Expect = 0.88
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +2
Query: 179 KTGTTIVGIIYADGVILGADTRAT 250
KTGTT VGI DGVIL ADT+A+
Sbjct: 4 KTGTTTVGIRVKDGVILAADTQAS 27
>UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1;
Encephalitozoon cuniculi|Rep: Proteasome subunit beta
type - Encephalitozoon cuniculi
Length = 203
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2
Query: 182 TGTTIVGIIYADGVILGADTRAT 250
TGTTI+ I Y DGV++GAD+R +
Sbjct: 9 TGTTIIAIKYDDGVLIGADSRTS 31
>UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7;
Halobacteriaceae|Rep: Proteasome, subunit alpha -
Halobacterium salinarium (Halobacterium halobium)
Length = 255
Score = 35.1 bits (77), Expect = 1.5
Identities = 20/83 (24%), Positives = 38/83 (45%)
Frame = +1
Query: 259 VVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLK 438
V+S+KN QK+ + N +G+ + +S+ ++ L G + ++ +T+
Sbjct: 86 VISNKNVQKVEEIQPNAALSISGSVGGAQSFIRSLRAEANLYEARRGEYMSIDALSTMAS 145
Query: 439 RMLFRYQGHIGAALVLGGVDRTG 507
+L R +LGGVD G
Sbjct: 146 NLL-RGGPFFRVVPILGGVDDDG 167
Score = 33.9 bits (74), Expect = 3.6
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 179 KTGTTIVGIIYADGVILGADTRAT 250
KTGTTIVG+ DGV++ +D RA+
Sbjct: 58 KTGTTIVGLTTQDGVLMASDMRAS 81
>UniRef50_Q24QW7 Cluster: Putative uncharacterized protein; n=1;
Desulfitobacterium hafniense Y51|Rep: Putative
uncharacterized protein - Desulfitobacterium hafniense
(strain Y51)
Length = 430
Score = 34.7 bits (76), Expect = 2.0
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2
Query: 92 EIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATE 253
E P GFS + +A+LA K A TGT + +I+A I+G TR E
Sbjct: 96 EPPFNGFSVLRHEFDAWLADKAREAGAVLVTGTVVDDVIHAGNRIVGVKTRRDE 149
>UniRef50_A0LI50 Cluster: Extracellular solute-binding protein,
family 5 precursor; n=1; Syntrophobacter fumaroxidans
MPOB|Rep: Extracellular solute-binding protein, family 5
precursor - Syntrophobacter fumaroxidans (strain DSM
10017 / MPOB)
Length = 559
Score = 34.3 bits (75), Expect = 2.7
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +1
Query: 547 NYHMQPWDLDPLAAMAVFE-AGWKR 618
N +++PW DP AA+A+ E AGWKR
Sbjct: 353 NRNIKPWPYDPAAALALLEQAGWKR 377
>UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 219
Score = 33.9 bits (74), Expect = 3.6
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 170 KATKTGTTIVGIIYADGVILGADTRAT 250
+ ++GTT VG+I +D VIL AD RAT
Sbjct: 20 RVVRSGTTTVGLIASDHVILAADKRAT 46
>UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2;
Halorubrum|Rep: Proteasome endopeptidase complex -
Halorubrum lacusprofundi ATCC 49239
Length = 243
Score = 33.9 bits (74), Expect = 3.6
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 179 KTGTTIVGIIYADGVILGADTRAT 250
KTGTT VGI ADGV++ D RA+
Sbjct: 47 KTGTTTVGIKTADGVVMATDMRAS 70
>UniRef50_A7D1R0 Cluster: Proteasome endopeptidase complex; n=2;
Halorubrum lacusprofundi ATCC 49239|Rep: Proteasome
endopeptidase complex - Halorubrum lacusprofundi ATCC
49239
Length = 268
Score = 33.9 bits (74), Expect = 3.6
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Frame = +1
Query: 253 NTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATL 432
+T++ ++ +K+H L ++ AG AD Q + RL G V VET
Sbjct: 58 STLMEAESIEKLHKLDDHLGTASAGHVADARQLIDLARRQSQGNRLRYGEPVGVETLTKF 117
Query: 433 LKRMLFRYQGH-----IGAALVLGGVD 498
+ + GAAL++GG+D
Sbjct: 118 VTDHIQENTQRGGTRPYGAALLIGGID 144
>UniRef50_UPI00015A6AB9 Cluster: UPI00015A6AB9 related cluster; n=1;
Danio rerio|Rep: UPI00015A6AB9 UniRef100 entry - Danio
rerio
Length = 264
Score = 33.5 bits (73), Expect = 4.7
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 173 ATKTGTTIVGIIYADGVILGADTRAT 250
A GTT +G I+ DGVI ADTRA+
Sbjct: 48 AQSHGTTTLGFIFQDGVIAAADTRAS 73
>UniRef50_Q2J9Q3 Cluster: 20S proteasome, A and B subunits; n=23;
Actinomycetales|Rep: 20S proteasome, A and B subunits -
Frankia sp. (strain CcI3)
Length = 304
Score = 33.5 bits (73), Expect = 4.7
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 146 AQKGFPAPKATKT-GTTIVGIIYADGVILGADTRATE 253
A+ G P P GTTIV + + GVI+ D RAT+
Sbjct: 68 ARSGLPGPVTEVAHGTTIVAVAFPGGVIMAGDRRATQ 104
>UniRef50_A4BDN4 Cluster: Permease of the major facilitator
superfamily protein; n=1; Reinekea sp. MED297|Rep:
Permease of the major facilitator superfamily protein -
Reinekea sp. MED297
Length = 438
Score = 33.5 bits (73), Expect = 4.7
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2
Query: 334 LLFLLHNNTCWMLSSGFFGSFCP 266
+LFL+ +NT WMLS F SF P
Sbjct: 114 MLFLVMSNTAWMLSESFIASFLP 136
>UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 290
Score = 33.5 bits (73), Expect = 4.7
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 VSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKR 441
++ + +KI + + AG AAD + ++ L L G + V A+ ++
Sbjct: 105 IASQEVKKIIQINDFLLGTMAGGAADCSYWERVLSKLCRLYELRNGERISVAGASKMITN 164
Query: 442 MLFRYQGH-IGAALVLGGVDRTG 507
+ F Y+ + + A +++ G D+ G
Sbjct: 165 IFFHYRAYDLSAGIMIAGFDKDG 187
>UniRef50_Q465F8 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina barkeri str. Fusaro|Rep: Putative
uncharacterized protein - Methanosarcina barkeri (strain
Fusaro / DSM 804)
Length = 211
Score = 33.5 bits (73), Expect = 4.7
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 268 DKNCQKIHYLASNMYCCGAGTAADTEM--TTQSVASQLELQ-RLHTGRTVPVETAATLLK 438
D CQ IH S + + E+ TT++V L RL+ + P ET T+L+
Sbjct: 43 DDTCQLIHENGSYWFVINGRKRSFPELSHTTENVRITQGLHDRLNEAKIHPDETINTVLQ 102
Query: 439 RMLFRYQGH 465
R+LF Y G+
Sbjct: 103 RLLFSYYGN 111
>UniRef50_UPI0000004430 Cluster: hypothetical protein LOC446135;
n=2; Danio rerio|Rep: hypothetical protein LOC446135 -
Danio rerio
Length = 375
Score = 33.1 bits (72), Expect = 6.2
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2
Query: 185 GTTIVGIIYADGVILGADTRAT 250
GTT +G I+ DGVI ADTRA+
Sbjct: 77 GTTTLGFIFQDGVIAAADTRAS 98
>UniRef50_A2DYG3 Cluster: F/Y-rich N-terminus family protein; n=1;
Trichomonas vaginalis G3|Rep: F/Y-rich N-terminus family
protein - Trichomonas vaginalis G3
Length = 1587
Score = 33.1 bits (72), Expect = 6.2
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +2
Query: 56 LSNHEMASALVPEIPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIV 199
LS E A A P++PV +F+ F+R+ L K P PK +K+ +T+V
Sbjct: 9 LSTTEEAQAF-PDVPVVPENFQ-FKRSYLLGSKITPTPKKSKSASTVV 54
>UniRef50_Q4P203 Cluster: Proteasome subunit beta type; n=1;
Ustilago maydis|Rep: Proteasome subunit beta type -
Ustilago maydis (Smut fungus)
Length = 266
Score = 33.1 bits (72), Expect = 6.2
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 182 TGTTIVGIIYADGVILGADTRATEIQLSR 268
TGT+++GI Y DG++L DT A+ L+R
Sbjct: 47 TGTSVLGIKYKDGIMLATDTLASYGSLAR 75
>UniRef50_UPI0000E47CE3 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 229
Score = 32.7 bits (71), Expect = 8.2
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 304 NMYCCG--AGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQG 462
N Y G AG AAD + +A Q + L + V A+ LL ML+ Y+G
Sbjct: 108 NPYLLGTMAGGAADCAFWERVLAEQCRIYELRNKERISVAAASKLLANMLYNYKG 162
>UniRef50_A4VTS2 Cluster: Methyl-accepting chemotaxis protein; n=5;
Streptococcus suis|Rep: Methyl-accepting chemotaxis
protein - Streptococcus suis (strain 05ZYH33)
Length = 1141
Score = 32.7 bits (71), Expect = 8.2
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 283 KIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAAT 429
+IH S++ CG+ AD TT+SVA+ LE + TG T E ++
Sbjct: 870 EIHAATSSVTPCGSSAYADGS-TTESVATPLEKDSIQTGNTEIAEPTSS 917
>UniRef50_A1UHS7 Cluster: 20S proteasome, A and B subunits; n=19;
Corynebacterineae|Rep: 20S proteasome, A and B subunits
- Mycobacterium sp. (strain KMS)
Length = 304
Score = 32.7 bits (71), Expect = 8.2
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Frame = +2
Query: 53 NLSNHEMASAL--VPEIPVPGFSFENFQRNA------FLAQKGFPAPKATKTGTTIVGII 208
+LS H S VP +P+ SF + R F A GTTIV +
Sbjct: 13 DLSRHSSHSTTRGVPSVPMDLSSFSDMLRRQAPHLLPFRGDASLTPTDAVPHGTTIVALK 72
Query: 209 YADGVILGADTRATE 253
+ GV++ D RAT+
Sbjct: 73 FPGGVVMAGDRRATQ 87
>UniRef50_Q8T8V8 Cluster: Proteasome subunit beta type; n=13;
Neoptera|Rep: Proteasome subunit beta type - Drosophila
melanogaster (Fruit fly)
Length = 315
Score = 32.7 bits (71), Expect = 8.2
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Frame = +1
Query: 262 VSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKR 441
+ + +KI L M AG AAD + +A + L +L + + V+TAA ++
Sbjct: 97 IGSQTMRKIVELNDYMLGTLAGGAADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICN 156
Query: 442 MLFRYQG-HIGAALVLGGVDRTGLIFTAFILMDL-*INYHMQPWDLDPLA--AMAVFEAG 609
+ Y+G + ++L G D G I +D + H Q + + + A+ V + G
Sbjct: 157 ISTEYKGMGLVMGMMLAGFDDEG---PKLIYVDSEGMRSHGQVFSVGSGSPYALGVLDTG 213
Query: 610 WKRDMNEEE 636
++ D++++E
Sbjct: 214 YRYDLSDQE 222
>UniRef50_Q8I0U7 Cluster: Proteasome, putative; n=5; Plasmodium|Rep:
Proteasome, putative - Plasmodium falciparum (isolate
3D7)
Length = 282
Score = 32.7 bits (71), Expect = 8.2
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 185 GTTIVGIIYADGVILGADTRAT 250
GTTI+GIIY +GV+L D+R +
Sbjct: 30 GTTIIGIIYDNGVMLACDSRTS 51
>UniRef50_A2BN27 Cluster: Proteasome beta; n=3;
Desulfurococcales|Rep: Proteasome beta - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 212
Score = 32.7 bits (71), Expect = 8.2
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2
Query: 185 GTTIVGIIYADGVILGADTRAT 250
GTT VGI++ D V+L AD RAT
Sbjct: 15 GTTTVGIVFRDFVVLAADRRAT 36
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,332,950
Number of Sequences: 1657284
Number of extensions: 13600439
Number of successful extensions: 35417
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 33722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35388
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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