Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0311
         (668 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    26   0.37 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    26   0.37 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    26   0.37 
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   8.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   8.0  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 645 FFPFFLIHITFPTCFKHCHSRKRIQ-IPWLHMV 550
           + PFFL+++  P C   C S + +  I WL  V
Sbjct: 340 WLPFFLMYVIVPFCPDCCPSDRMVYFITWLGYV 372


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 645 FFPFFLIHITFPTCFKHCHSRKRIQ-IPWLHMV 550
           + PFFL+++  P C   C S + +  I WL  V
Sbjct: 340 WLPFFLMYVIVPFCPDCCPSDRMVYFITWLGYV 372


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 645 FFPFFLIHITFPTCFKHCHSRKRIQ-IPWLHMV 550
           + PFFL+++  P C   C S + +  I WL  V
Sbjct: 340 WLPFFLMYVIVPFCPDCCPSDRMVYFITWLGYV 372


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 294 VVDFLAVFVRDNCISVALVSAPRITPS 214
           ++DF   FV +   +V  V  PR+ P+
Sbjct: 492 LIDFWVSFVNNGVPNVNSVQWPRLNPN 518


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 294 VVDFLAVFVRDNCISVALVSAPRITPS 214
           ++DF   FV +   +V  V  PR+ P+
Sbjct: 492 LIDFWVSFVNNGVPNVNSVQWPRLNPN 518


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,683
Number of Sequences: 438
Number of extensions: 4019
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)