Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0310
         (541 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1ZDL0 Cluster: Surface protein, putative; n=2; Psychro...    33   5.6  
UniRef50_UPI00015B4758 Cluster: PREDICTED: hypothetical protein;...    32   7.3  
UniRef50_Q04AV2 Cluster: Putative uncharacterized protein; n=2; ...    32   7.3  
UniRef50_UPI00015B4C54 Cluster: PREDICTED: similar to predicted ...    32   9.7  
UniRef50_A6ESW5 Cluster: 2OG-Fe(II) oxygenase; n=1; unidentified...    32   9.7  

>UniRef50_Q1ZDL0 Cluster: Surface protein, putative; n=2;
           Psychromonas sp. CNPT3|Rep: Surface protein, putative -
           Psychromonas sp. CNPT3
          Length = 743

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 16/28 (57%), Positives = 17/28 (60%)
 Frame = +1

Query: 400 HHLSQHTLLTVLQTIVAYSGHATPAVAT 483
           HH S+H  LTV   IV  S H TPA AT
Sbjct: 303 HHFSEHVALTVTDAIVT-SLHVTPATAT 329


>UniRef50_UPI00015B4758 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 129

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 10/58 (17%)
 Frame = +3

Query: 204 PVFTKTIAAPAVSYAAAQHTHMLLAQHIRTPLHHRTLMPHH----------PVVTKTI 347
           PV    + A  V  A   H   L+A H     HH  L+PHH          P+VTKT+
Sbjct: 53  PVAHAPVHAAVVHSAPLVHHEPLIAHHAPIIAHHEPLIPHHQPLAPHVHTAPIVTKTV 110


>UniRef50_Q04AV2 Cluster: Putative uncharacterized protein; n=2;
           Lactobacillus delbrueckii subsp. bulgaricus|Rep:
           Putative uncharacterized protein - Lactobacillus
           delbrueckii subsp. bulgaricus (strain ATCC BAA-365)
          Length = 211

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 15/36 (41%), Positives = 24/36 (66%)
 Frame = -3

Query: 128 TDGFSYHSRSRDSVAVSQGSSSEETTSADYAYSAQS 21
           ++  S  S S +S + S  SSSEE +S+ Y+YS+Q+
Sbjct: 83  SEDMSQSSSSEESSSDSSSSSSEELSSSSYSYSSQA 118


>UniRef50_UPI00015B4C54 Cluster: PREDICTED: similar to predicted
            protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
            to predicted protein - Nasonia vitripennis
          Length = 3965

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
 Frame = -2

Query: 255  VQQHKRRQEQQWS**RLEQHRRQRCGHRERCELSMKRPKTQLD*WF*LPQQEPR*RGCKP 76
            +++ KRR+E++    R+E+ R++    RER E   ++ K + D      +QE   R  + 
Sbjct: 1100 LEREKRREEKE----RIERERKRERDERERLERERRKEKEERD------RQEKERRDKEE 1149

Query: 75   REQLRGD-HQRGLRLQRTE 22
            +E++  + H+R  R +R E
Sbjct: 1150 KERIEKEKHERDKRREREE 1168


>UniRef50_A6ESW5 Cluster: 2OG-Fe(II) oxygenase; n=1; unidentified
           eubacterium SCB49|Rep: 2OG-Fe(II) oxygenase -
           unidentified eubacterium SCB49
          Length = 203

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -3

Query: 332 NRMMRHKRTMVQRRTNMLGQ*HMSMLCSSIRDGRSSNGLSEDWSSTVGSD 183
           +R + H +T ++  T   G    ++LC+  RDG+ SNG   D    +G D
Sbjct: 88  SRTLHHIKTAIENHT---GATFNTVLCNLYRDGKDSNGWHSDNEKELGPD 134


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 390,587,180
Number of Sequences: 1657284
Number of extensions: 5982034
Number of successful extensions: 19703
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19636
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)