Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0310
         (541 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   4.0  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   6.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.9  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   9.2  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   9.2  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   9.2  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   9.2  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 335 DQDYFSSCFLSIFLLVHNRSWITIF 409
           D+ YF   F S+F L+    W   F
Sbjct: 219 DEMYFRVAFPSVFTLIDYSLWKACF 243


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -3

Query: 353 WRNSLGHNRMMRHKRTMVQRRTNMLGQ*HMSMLCSSIRD 237
           W+NS+ HN  +      V R  +  G+ +  ML  S  D
Sbjct: 127 WQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAED 165


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 114 LPQQEPR*RGCKPREQL 64
           L QQ    + C+PREQL
Sbjct: 580 LDQQNQWCKPCRPREQL 596


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 114 LPQQEPR*RGCKPREQL 64
           L QQ    + C+PREQL
Sbjct: 472 LDQQNQWCKPCRPREQL 488


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 270 LLAQHIRTPLHHRTLMPHHPVVTK 341
           L A+ +  P     + PH PV+ K
Sbjct: 263 LAAEKVHDPFIASLVRPHGPVIEK 286


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 270 LLAQHIRTPLHHRTLMPHHPVVTK 341
           L A+ +  P     + PH PV+ K
Sbjct: 263 LAAEKVHDPFIASLVRPHGPVIEK 286


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 270 LLAQHIRTPLHHRTLMPHHPVVTK 341
           L A+ +  P     + PH PV+ K
Sbjct: 263 LAAEKVHDPFIASLVRPHGPVIEK 286


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 270 LLAQHIRTPLHHRTLMPHHPVVTK 341
           L A+ +  P     + PH PV+ K
Sbjct: 262 LAAEKVHDPFIASLVRPHGPVIEK 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,536
Number of Sequences: 336
Number of extensions: 1429
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)