Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0309
         (603 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.49 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.6  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   3.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.1  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   8.0  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.49
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 292 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 387
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 408 GQQREDDPDHVRNIQHARHVRRHPSRA 488
           GQ    DP+ V   +   H+  HP +A
Sbjct: 903 GQYTTKDPNEVTCDEEEGHISYHPDKA 929


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 261 PDPQIPHRTRNRH 299
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 376 RGVPRGRHAAHCRRYDAKSSP 314
           RG P    AA C +   KS P
Sbjct: 33  RGTPLAMLAAQCNKLSNKSPP 53


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 330 MPNLLHVIPVSDDSVFD 280
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 330 MPNLLHVIPVSDDSVFD 280
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 330 MPNLLHVIPVSDDSVFD 280
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 330 MPNLLHVIPVSDDSVFD 280
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -2

Query: 266 VRIPFCSVPHLLHKSPSVPYRPSRPDG 186
           +++P  +  H    SP++P+  +R DG
Sbjct: 117 MQLPHPAAAHSALLSPAMPHNLTRHDG 143


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,568
Number of Sequences: 336
Number of extensions: 3750
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)