Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0307
         (696 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    99   9e-20
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    42   0.011
UniRef50_Q8MTP2 Cluster: Bm101; n=1; Bombyx mori|Rep: Bm101 - Bo...    36   1.3  
UniRef50_UPI0000E4A923 Cluster: PREDICTED: similar to angiotensi...    35   2.2  
UniRef50_UPI0000660A83 Cluster: family with sequence similarity ...    34   2.9  
UniRef50_A0DCJ4 Cluster: Chromosome undetermined scaffold_45, wh...    34   2.9  
UniRef50_UPI0000E46784 Cluster: PREDICTED: similar to endonuclea...    34   3.8  
UniRef50_A6RVX5 Cluster: Predicted protein; n=1; Botryotinia fuc...    34   3.8  

>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 99.1 bits (236), Expect = 9e-20
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = +2

Query: 125  FQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVLSGRQRL 256
            FQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVLSGRQRL
Sbjct: 930  FQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVLSGRQRL 973



 Score = 96.3 bits (229), Expect = 6e-19
 Identities = 43/46 (93%), Positives = 44/46 (95%)
 Frame = +3

Query: 3    GECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFRDLF 140
            GECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRF+  F
Sbjct: 889  GECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSF 934


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +2

Query: 284 MGDGNHSPSGGPYARLPTKA 343
           MGDGNHSPSG PYA LPT+A
Sbjct: 1   MGDGNHSPSGRPYASLPTRA 20


>UniRef50_Q8MTP2 Cluster: Bm101; n=1; Bombyx mori|Rep: Bm101 -
          Bombyx mori (Silk moth)
          Length = 92

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 16/22 (72%), Positives = 18/22 (81%)
 Frame = -1

Query: 84 ELYSGGGRCDGKNEMLVSSRTI 19
          E Y GG RCDGKNE +VSS+TI
Sbjct: 4  EFYDGG-RCDGKNETMVSSQTI 24


>UniRef50_UPI0000E4A923 Cluster: PREDICTED: similar to angiotensin
           converting enzyme, partial; n=3; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to angiotensin
           converting enzyme, partial - Strongylocentrotus
           purpuratus
          Length = 926

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 12/20 (60%), Positives = 18/20 (90%)
 Frame = +2

Query: 122 AFQRSFLPRTIRLWNELPST 181
           +++ SF PRTIR+WN+LP+T
Sbjct: 883 SYKYSFYPRTIRIWNQLPAT 902


>UniRef50_UPI0000660A83 Cluster: family with sequence similarity 65,
           member A (FAM65A), mRNA; n=1; Takifugu rubripes|Rep:
           family with sequence similarity 65, member A (FAM65A),
           mRNA - Takifugu rubripes
          Length = 1104

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 123 ALWMTAVAPGSMDELYSGGGRCDGKNEMLVSSRT-IPQSTP 4
           AL MT  APGS +E+    G   G  EM +SSRT  P S P
Sbjct: 562 ALLMTKAAPGSQEEMSLSSGMSVGDIEMEISSRTPEPSSDP 602


>UniRef50_A0DCJ4 Cluster: Chromosome undetermined scaffold_45, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_45,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 340

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +1

Query: 508 ELTRIVNNSLYFITNKKNHKCMYFI*HFASDILVGNNYLSNKRTW 642
           E   I  N+ YF+T  KNH+CM ++   AS  L G  Y     +W
Sbjct: 53  ESRNIQLNASYFLTRSKNHRCMIYLHGNASCRLEGIRYAEVLASW 97


>UniRef50_UPI0000E46784 Cluster: PREDICTED: similar to
           endonuclease/reverse transcriptase; n=1;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           endonuclease/reverse transcriptase - Strongylocentrotus
           purpuratus
          Length = 576

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +2

Query: 125 FQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVLSGRQRLALP 265
           ++ +F PRTIR WN L  ++F     +  FK  LW  + G   + +P
Sbjct: 415 YRLTFFPRTIRAWNLLSPSIF-ACDAVETFKARLWEAIQGGNIIIVP 460


>UniRef50_A6RVX5 Cluster: Predicted protein; n=1; Botryotinia
           fuckeliana B05.10|Rep: Predicted protein - Botryotinia
           fuckeliana B05.10
          Length = 113

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = +3

Query: 141 CHVPSGYGMSSPPRCFPSAMTCPSSNEACGEY*AVGSGWLCP 266
           C   SGY   SP  C  SA  C ++++ CG Y  VGSG  CP
Sbjct: 52  CGGDSGYTCESPKCCSESAY-CGNTSDFCGTYCDVGSG--CP 90


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,533,416
Number of Sequences: 1657284
Number of extensions: 14638590
Number of successful extensions: 36495
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 35208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36486
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)