Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0306
         (786 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    26   0.39 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   1.2  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   6.4  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    21   8.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.4  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +1

Query: 367 NPRTVSKLRPTIRESIPSAEPKLPRS--GSKSVSRATEQFPE 486
           +PRT    +P  ++  P+AE K PR+      ++R   +F E
Sbjct: 208 SPRTRRVKKPGAKQGAPTAEEKRPRTAFSGAQLARLKHEFAE 249


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +1

Query: 160 LNRKRKCKEISSTQHGLHPPTKPTRVSRNRS--SRPKS 267
           +NR  +  E+   Q   +PPTKP    R+    S PK+
Sbjct: 534 INRHLRGNELLPMQQSQNPPTKPYGTCRSEGIFSDPKN 571


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 746 LSPRPRTQLNWFFW 705
           +S RP + L WFFW
Sbjct: 560 ISIRPISTLGWFFW 573


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 696 FFRPKKPI*LGSGSWTKDLAQVAFQGL 776
           FF  ++P   GS    K+  + AF G+
Sbjct: 83  FFHEREPCIAGSAPCRKNTGRCAFDGI 109


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
 Frame = -3

Query: 637 YCVHTAQLAL----VIDFDYYQHIGLDSEIGP 554
           Y  H   LAL     IDF+YY +    +  GP
Sbjct: 45  YVKHFHPLALSNKNAIDFNYYYYAATYARFGP 76


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 531 VHSILVLACNWT*FWFWKLFCC 466
           VH +L+L C +  ++   LFCC
Sbjct: 250 VH-LLLLVCIYYFYYMHLLFCC 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,587
Number of Sequences: 336
Number of extensions: 3815
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)