Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0306
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z32679-3|CAA83596.1| 401|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical pr... 29 5.0
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 28 6.6
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 6.6
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 6.6
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical pr... 28 8.7
AC024814-2|AAK68521.2| 259|Caenorhabditis elegans Hypothetical ... 28 8.7
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical protein
F20C5.2b protein.
Length = 1130
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 130 TKTSQRKPIKLNR--KRKCKEISSTQHGLHPPTKPTRVSRNRSS 255
T ++RK I + R R K+ + LHPPT P+++S++ SS
Sbjct: 1050 TPRTRRKLISVRRLKDRNRKKFKCSMKRLHPPTSPSKISKSASS 1093
>Z32679-3|CAA83596.1| 401|Caenorhabditis elegans Hypothetical
protein C05B5.3 protein.
Length = 401
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 589 NNQNQLQVPTGQYGHNTGQNSKLGQFNGQSY*PWPNFSGQKNQ 717
+ QNQ+ PT + + N G FN Q+ NF NQ
Sbjct: 195 SQQNQVNGPTSGFSNQQTSNQNSGFFNNQNQQNGQNFGNSGNQ 237
>Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical
protein F09E8.6 protein.
Length = 503
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 130 TKTSQRKPIKLNRKRKCKEISSTQHGLHPPTKPT-RVSRNRSSRPK 264
T T+ KP+ N++++ K SST G T T + + +S PK
Sbjct: 421 TTTTTPKPVPRNKEKENKSASSTTRGTSTATSTTPKTTTTTTSAPK 466
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 394 PTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVAS 510
P+ PS++ P +GS + S+ + Q P P P +S
Sbjct: 384 PSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSS 422
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 394 PTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVAS 510
P+ PS++ P +GS + S+ + Q P P P +S
Sbjct: 591 PSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSS 629
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 394 PTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVAS 510
P+ PS++ P +GS + S+ + Q P P P +S
Sbjct: 591 PSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSS 629
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
protein H03E18.1 protein.
Length = 1147
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +1
Query: 370 PRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKS 495
P++ K +P ++ P+ +PK+ +K+V ++ +PKS
Sbjct: 338 PKSAEKKKPDTKKETPTKKPKVELVTAKTVEGEKKETKKPKS 379
>Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical
protein F39D8.1c protein.
Length = 924
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 592 NQNQLQVPTGQYGHNTGQNSKLGQFNGQSY*PWPNFSGQKNQFN 723
NQNQ Q P G QN + N Y F GQ N
Sbjct: 244 NQNQGQYPDPNQGQYQNQNQQNQNINAGGYVDQNQFQGQDQNIN 287
>Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical
protein F39D8.1b protein.
Length = 919
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 592 NQNQLQVPTGQYGHNTGQNSKLGQFNGQSY*PWPNFSGQKNQFN 723
NQNQ Q P G QN + N Y F GQ N
Sbjct: 239 NQNQGQYPDPNQGQYQNQNQQNQNINAGGYVDQNQFQGQDQNIN 282
>Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical
protein F39D8.1a protein.
Length = 945
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 592 NQNQLQVPTGQYGHNTGQNSKLGQFNGQSY*PWPNFSGQKNQFN 723
NQNQ Q P G QN + N Y F GQ N
Sbjct: 262 NQNQGQYPDPNQGQYQNQNQQNQNINAGGYVDQNQFQGQDQNIN 305
>AC024814-2|AAK68521.2| 259|Caenorhabditis elegans Hypothetical
protein Y54F10AR.1 protein.
Length = 259
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 524 PYWFWLATGPDFGSGNCSVALETDFEPDRGNFGSALGI 411
PY + T PD+ N V +ET PD G +A G+
Sbjct: 86 PYCKTVVTNPDYMKENFYVKIETIHLPDNGTTENAHGL 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,317,872
Number of Sequences: 27780
Number of extensions: 364696
Number of successful extensions: 1069
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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