Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0304
         (633 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   1.9  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   3.3  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   4.3  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   4.3  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   7.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   9.9  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 252 VYRKRFFGNKHLGQFIIAVCDGQIGHPGVIQL 157
           +Y+   F + H G     +C GQ+    V+QL
Sbjct: 21  IYKTEAFDSLHAGNAEKTLCSGQVCLGSVMQL 52


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 505 IKHTIMLWTLNRNIPLFFTV 446
           I  TI+LW +N+ IP+  ++
Sbjct: 399 IVSTILLWFINKIIPIRMSI 418


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 184 NWPPGRYSALRLI 146
           NW PG +  LRL+
Sbjct: 341 NWVPGNHDQLRLV 353


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 184 NWPPGRYSALRLI 146
           NW PG +  LRL+
Sbjct: 341 NWVPGNHDQLRLV 353


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/39 (23%), Positives = 21/39 (53%)
 Frame = +1

Query: 505 STQRGARLSKREVPELRKSNCTFGVHQKRGSLTRFIWKI 621
           +++R  R +     E+  S+C++  H+K  S    +W++
Sbjct: 321 ASERNPRSAVLAAREITSSSCSYMAHEKL-SYAFSVWRM 358


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 522 PFVQTRGARIAQIQLHFWCTPKTRQLNKVYLE 617
           PF+ +      QI+  F+     + LN+ YLE
Sbjct: 241 PFMLSNSLNFPQIRGEFYFFLHKQVLNRYYLE 272


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 522 PFVQTRGARIAQIQLHFWCTPKTRQLNKVYLE 617
           PF+ +      QI+  F+     + LN+ YLE
Sbjct: 241 PFMLSNSLNFPQIRGEFYFFLHKQVLNRYYLE 272


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 73  LNSLTEASPSLGQSSESVESDENKRLNVKLN 165
           ++SL E       SS SVE  EN+    +LN
Sbjct: 326 ISSLDEIRTRYKDSSSSVEGWENRATIPELN 356


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,430
Number of Sequences: 438
Number of extensions: 3923
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)