Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0303
         (606 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    26   1.1  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    24   3.3  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   4.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   5.8  
AY146721-1|AAO12081.1|  144|Anopheles gambiae odorant-binding pr...    23   7.7  
AF437884-1|AAL84179.1|  144|Anopheles gambiae odorant binding pr...    23   7.7  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = +3

Query: 156 CR*RGLATDAADPYLATWLQYRAHGK-KHYDAQSIKDH 266
           C  +G  T A  P +A W   R HG+   Y  Q + DH
Sbjct: 854 CSTKGRTTHALIPNIAAWTS-RKHGEVNFYMTQFLSDH 890


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 474 ATVGRAIGAGLFAITPAGERGMC 406
           ATVG+++ +G    TP+G  G C
Sbjct: 19  ATVGQSLNSGDPCQTPSGTAGTC 41


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 332 TIHWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPTVAQP 481
           T++ P    ++ G   A P L+   + PL P  ++  RP P+ +PT+  P
Sbjct: 82  TMNMPPRPGMIPGMPGAPPLLMG-PNGPLPPP-MMGMRPPPMMVPTMGMP 129


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 373 NPGVTQLNRLAAHPPFASWRNS 438
           +PG     +L+ HPP AS R+S
Sbjct: 835 HPGAQTQPQLSQHPPGASGRSS 856


>AY146721-1|AAO12081.1|  144|Anopheles gambiae odorant-binding
           protein AgamOBP1 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 502 TICHSPFRLRNCWKGDRCGPLRYY 431
           T+C   F L  CWK  +  P  Y+
Sbjct: 121 TLCDKAFWLHKCWK--QSDPKHYF 142


>AF437884-1|AAL84179.1|  144|Anopheles gambiae odorant binding
           protein protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 502 TICHSPFRLRNCWKGDRCGPLRYY 431
           T+C   F L  CWK  +  P  Y+
Sbjct: 121 TLCDKAFWLHKCWK--QSDPKHYF 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,270
Number of Sequences: 2352
Number of extensions: 14241
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)