Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0303
         (606 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   100   7e-22
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr...    30   1.5  
U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical pr...    28   4.5  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  100 bits (240), Expect = 7e-22
 Identities = 41/64 (64%), Positives = 56/64 (87%)
 Frame = +1

Query: 64  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 243
           M RED++TWK+NYF K+++L +EYPKC +VG DNVGS+QMQ+IR ++RG + +LMGKNTM
Sbjct: 1   MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTM 60

Query: 244 MRKA 255
           +RKA
Sbjct: 61  IRKA 64


>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical
           protein ZC84.1 protein.
          Length = 1556

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
 Frame = +2

Query: 188 RSVSRYVAPVSCS--WEKTL*CAKHQ--RPPGQQSSPRGGARYPIRPIVSRITIHWPSFY 355
           R ++   A VSC+  ++ T   ++H     PG   S +GG  Y I+P   R +IH P F 
Sbjct: 379 RPITSCAASVSCANDFQCTAIGSQHLCCPTPGSVCSAKGGRPYDIQP---RTSIHHPGFM 435

Query: 356 NVVTGK 373
            V TGK
Sbjct: 436 -VYTGK 440


>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 18/70 (25%), Positives = 35/70 (50%)
 Frame = +1

Query: 37  RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 216
           R    +L+++ ++ K T K+N   ++   +D+Y   FI    N+ S +   IR   + +S
Sbjct: 6   RDKNVSLTKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENS 64

Query: 217 IVLMGKNTMM 246
               GKN ++
Sbjct: 65  RFFFGKNNVI 74


>U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical
           protein C33G8.12 protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +1

Query: 19  LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDE 132
           L+ K   S ++ +SR+ +EDK +  SN+++K  QLL E
Sbjct: 156 LLWKLGESIFSDVSRLSKEDKNSMISNFYIK-WQLLME 192


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,891,639
Number of Sequences: 27780
Number of extensions: 312766
Number of successful extensions: 882
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)