Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0301
(638 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 195 2e-50
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 194 4e-50
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 194 4e-50
SB_56| Best HMM Match : Actin (HMM E-Value=0) 194 4e-50
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 194 4e-50
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 1e-29
SB_54| Best HMM Match : Actin (HMM E-Value=0) 107 6e-24
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 2e-23
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 90 1e-18
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 68 7e-12
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 61 6e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 52 4e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 47 1e-05
SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10) 43 2e-04
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046) 36 0.021
SB_11574| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.037
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 35 0.049
SB_55183| Best HMM Match : SGS (HMM E-Value=1.6) 35 0.064
SB_6304| Best HMM Match : RVT_1 (HMM E-Value=3.2e-18) 35 0.064
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 32 0.45
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.60
SB_22045| Best HMM Match : Amelogenin (HMM E-Value=0.23) 31 0.79
SB_32564| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 1.0
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_45219| Best HMM Match : rve (HMM E-Value=3e-14) 30 1.4
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 30 1.4
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 30 1.4
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 30 1.4
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 30 1.4
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 30 1.4
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 30 1.4
SB_54038| Best HMM Match : CHCH (HMM E-Value=0.44) 30 1.4
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 30 1.4
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 30 1.4
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 30 1.8
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.8
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_37149| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24) 29 2.4
SB_27401| Best HMM Match : SCP (HMM E-Value=9e-23) 29 2.4
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_59484| Best HMM Match : CHCH (HMM E-Value=0.18) 29 3.2
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_31262| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 28 5.6
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_48330| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 28 5.6
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 28 7.4
SB_42662| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_37182| Best HMM Match : DUF225 (HMM E-Value=1) 28 7.4
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 7.4
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_59727| Best HMM Match : C2 (HMM E-Value=0.0018) 28 7.4
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 28 7.4
SB_12076| Best HMM Match : CHCH (HMM E-Value=0.28) 28 7.4
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 28 7.4
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 28 7.4
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 7.4
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 27 9.7
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_7678| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_38059| Best HMM Match : Zfx_Zfy_act (HMM E-Value=2.6) 27 9.7
SB_25282| Best HMM Match : rve (HMM E-Value=6.3e-12) 27 9.7
SB_434| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 195 bits (476), Expect = 2e-50
Identities = 91/105 (86%), Positives = 95/105 (90%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANRENMT 432
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANRE MT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 433 QIMFETFNTPAMYVSIQAVLSLYASGVPPVSCLDFRDGVSHTVPI 567
QIMFETFN+PAMYV+IQAVLSLYASG +D DGVSHTVPI
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPI 166
Score = 128 bits (309), Expect = 4e-30
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +2
Query: 71 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 250
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 251 SK 256
SK
Sbjct: 61 SK 62
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 194 bits (474), Expect = 4e-50
Identities = 94/122 (77%), Positives = 101/122 (82%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANRENMT 432
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANRE MT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 433 QIMFETFNTPAMYVSIQAVLSLYASGVPPVSCLDFRDGVSHTVPILPKDTHFPTPSCRLD 612
QIMFETFN+PAMYV+IQAVLSLYASG +D DGV+HTVPI + P RLD
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY-EGYALPHAIIRLD 180
Query: 613 FS 618
+
Sbjct: 181 LA 182
Score = 128 bits (309), Expect = 4e-30
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +2
Query: 71 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 250
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 251 SK 256
SK
Sbjct: 61 SK 62
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 194 bits (474), Expect = 4e-50
Identities = 94/122 (77%), Positives = 101/122 (82%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANRENMT 432
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANRE MT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 433 QIMFETFNTPAMYVSIQAVLSLYASGVPPVSCLDFRDGVSHTVPILPKDTHFPTPSCRLD 612
QIMFETFN+PAMYV+IQAVLSLYASG +D DGV+HTVPI + P RLD
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY-EGYALPHAILRLD 179
Query: 613 FS 618
+
Sbjct: 180 LA 181
Score = 125 bits (302), Expect = 3e-29
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +2
Query: 77 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 194 bits (474), Expect = 4e-50
Identities = 94/122 (77%), Positives = 101/122 (82%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANRENMT 432
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANRE MT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 433 QIMFETFNTPAMYVSIQAVLSLYASGVPPVSCLDFRDGVSHTVPILPKDTHFPTPSCRLD 612
QIMFETFN+PAMYV+IQAVLSLYASG +D DGV+HTVPI + P RLD
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY-EGYALPHAILRLD 179
Query: 613 FS 618
+
Sbjct: 180 LA 181
Score = 126 bits (305), Expect = 1e-29
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +2
Query: 77 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 194 bits (474), Expect = 4e-50
Identities = 94/122 (77%), Positives = 101/122 (82%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANRENMT 432
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANRE MT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 433 QIMFETFNTPAMYVSIQAVLSLYASGVPPVSCLDFRDGVSHTVPILPKDTHFPTPSCRLD 612
QIMFETFN+PAMYV+IQAVLSLYASG +D DGV+HTVPI + P RLD
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY-EGYALPHAILRLD 180
Query: 613 FS 618
+
Sbjct: 181 LA 182
Score = 132 bits (320), Expect = 2e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +2
Query: 71 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 250
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 251 SK 256
SK
Sbjct: 61 SK 62
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 126 bits (305), Expect = 1e-29
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +2
Query: 77 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 70.9 bits (166), Expect = 8e-13
Identities = 38/68 (55%), Positives = 47/68 (69%)
Frame = +1
Query: 415 NRENMTQIMFETFNTPAMYVSIQAVLSLYASGVPPVSCLDFRDGVSHTVPILPKDTHFPT 594
N ++M +IMFETFN+PAMYV+IQAVLSLYASG +D DGV+HTVPI + P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY-EGYALPH 136
Query: 595 PSCRLDFS 618
RLD +
Sbjct: 137 AIIRLDLA 144
Score = 60.9 bits (141), Expect = 9e-10
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTF 342
+RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 107 bits (258), Expect = 6e-24
Identities = 50/82 (60%), Positives = 62/82 (75%)
Frame = +1
Query: 322 KIWHHTFYNELRVAPEEHPVLLTEASLNPKANRENMTQIMFETFNTPAMYVSIQAVLSLY 501
K+W H F ++LRV E+ PVLLTEA LNPK NRE M Q+MFE+FN P MYV++QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 502 ASGVPPVSCLDFRDGVSHTVPI 567
ASG + D DGVSHTVP+
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPV 2210
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 95 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 196
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 106 bits (254), Expect = 2e-23
Identities = 47/108 (43%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
Frame = +1
Query: 247 TEQRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEASLNPKANRE 423
++ R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE LNP NRE
Sbjct: 62 SQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNRE 121
Query: 424 NMTQIMFETFNTPAMYVSIQAVLSLYASGVPPVSCLDFRDGVSHTVPI 567
M ++MFE + +Y++IQAVL+LYA G+ +D DGV+H P+
Sbjct: 122 KMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPV 169
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +2
Query: 89 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEA 247
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEA 61
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 90.2 bits (214), Expect = 1e-18
Identities = 41/66 (62%), Positives = 51/66 (77%)
Frame = +1
Query: 370 EHPVLLTEASLNPKANRENMTQIMFETFNTPAMYVSIQAVLSLYASGVPPVSCLDFRDGV 549
+HPVLLTEA LNP+ NRE ++ FETFN PA+++S+QAVLSLYA+G LD DGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 550 SHTVPI 567
SH+VPI
Sbjct: 186 SHSVPI 191
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 67.7 bits (158), Expect = 7e-12
Identities = 27/77 (35%), Positives = 50/77 (64%)
Frame = +1
Query: 280 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANRENMTQIMFETFNT 459
PI+ G++ +WD EKI + + ++ HP+L++EA+ N + RE +T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 460 PAMYVSIQAVLSLYASG 510
PA ++ +VL+ +A+G
Sbjct: 63 PAFFLCKNSVLTAFANG 79
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 61.3 bits (142), Expect = 6e-10
Identities = 34/61 (55%), Positives = 39/61 (63%)
Frame = +1
Query: 436 IMFETFNTPAMYVSIQAVLSLYASGVPPVSCLDFRDGVSHTVPILPKDTHFPTPSCRLDF 615
IMFE FN+PA+YV+IQAVLSLYASG D DGVSH VPI + P RLD
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIY-EGYALPHAILRLDL 59
Query: 616 S 618
+
Sbjct: 60 A 60
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 80 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 196
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +2
Query: 65 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 235
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 236 GDEAQSK 256
GD A +K
Sbjct: 753 GDAAVAK 759
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +1
Query: 274 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASL 402
K+PI H IV +WD ME+ W + LR PE+H LL +L
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLLAVLAL 341
>SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10)
Length = 968
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +2
Query: 362 PPR-NTQSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAYHRY-RAWT 535
PPR +T+ PSTP PT R+ PR H+ +PS P P + Y A+T
Sbjct: 435 PPRLHTEYIHAYTPSTPTPTHRVHPR---LHAQYTLAYTPSTP-----TPTHAEYTHAYT 486
Query: 536 SATVSPTPCPSYQRIHTSPRH 598
+T +PT CP + R+HT H
Sbjct: 487 PSTQTPT-CPVHPRLHTEYTH 506
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +2
Query: 362 PPR-NTQSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAYHRY-RAWT 535
PPR +T+ PSTP PT R+ PR H+ +PS P P + Y A+T
Sbjct: 618 PPRLHTEYIHAYTPSTPTPTHRVHPR---LHAQYTLAYTPSTP-----TPTHAEYTHAYT 669
Query: 536 SATVSPTPCPSYQRIHTSPRH 598
+T +PT CP + R+HT H
Sbjct: 670 PSTQTPT-CPVHPRLHTEYTH 689
Score = 36.3 bits (80), Expect = 0.021
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Frame = +2
Query: 389 LRLPSTPRPTERI*PRSCSK--HSTRPPCTSPSKP-CSRCTRPAYH-RY-RAWTSATVSP 553
L PSTP PT R+ P ++ H+ +PS P +R P H +Y A+T +T +P
Sbjct: 554 LNTPSTPTPTRRVHPSLHAQYTHAEYTHAYTPSTPKATRLVHPHLHAKYIHAYTPSTPTP 613
Query: 554 TPCPSYQRIHTSPRH 598
T P R+HT H
Sbjct: 614 TR-PVPPRLHTEYIH 627
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 398 PSTPRPTERI*PRSCSK--HSTRPPCTSPSKPCSRCTRPAYHRYRAWTSATVSPTPCPSY 571
PSTP PT + PR ++ H+ P +P++P RP A+T + SPT +
Sbjct: 324 PSTPTPTRPVHPRLHTEYTHAYTPSTPTPTRPVH--PRPHIEYTHAYTPSAPSPTH-RVH 380
Query: 572 QRIHTS 589
R+HT+
Sbjct: 381 TRLHTN 386
Score = 32.7 bits (71), Expect = 0.26
Identities = 25/81 (30%), Positives = 36/81 (44%)
Frame = +2
Query: 356 VSPPRNTQSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAYHRYRAWT 535
V+P +TQ P TP PT+R H+ P +P++P Y A+T
Sbjct: 764 VNPRLHTQYTHTYTPGTPTPTQRE-----YTHAYTPSTPTPTRPVHPRLHTEY--THAYT 816
Query: 536 SATVSPTPCPSYQRIHTSPRH 598
+T SPT + R+HT H
Sbjct: 817 PSTPSPTH-RVHTRLHTKYTH 836
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 193 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 77
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1446
Score = 36.7 bits (81), Expect = 0.016
Identities = 25/80 (31%), Positives = 32/80 (40%)
Frame = +2
Query: 359 SPPRNTQSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAYHRYRAWTS 538
SPP T S S + TP P P S HS+ +SPS R + Y +T+
Sbjct: 1003 SPPHTTSSQSSQATHTPPPRAVDLPHPSSPHSSSALYSSPS-------RTSNLPYTTYTN 1055
Query: 539 ATVSPTPCPSYQRIHTSPRH 598
+S P P Y P H
Sbjct: 1056 TAISSQPSPPYSSTSPHPSH 1075
>SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)
Length = 797
Score = 36.3 bits (80), Expect = 0.021
Identities = 35/92 (38%), Positives = 40/92 (43%), Gaps = 9/92 (9%)
Frame = +2
Query: 353 CVSPPRNTQSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPCS-RCTRPAYHRYR- 526
C P T L P TP PT S + P TSP S R PAY R
Sbjct: 476 CTPVPAYTTPRVLHSPRTPLPTYTSPREHHSPRTPLPTYTSPRVHQSPRTPVPAYFTPRV 535
Query: 527 --AWTSATV--SP-TPCPSYQ--RIHTSPRHP 601
A+T+ V SP TP P+Y R+H SPR P
Sbjct: 536 LPAYTTPRVHHSPRTPVPAYTTPRVHHSPRTP 567
Score = 29.5 bits (63), Expect = 2.4
Identities = 33/99 (33%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Frame = +2
Query: 338 PSTMSCVSPPRNTQSCSLRLPSTPRPTERI*PRSCSKHSTRPPCT-SPSKPCSRCTRP-A 511
P + + PR S +P+ P PR+ T P SP P T P
Sbjct: 533 PRVLPAYTTPRVHHSPRTPVPAYTTPRVHHSPRTPLPAYTSPRVHHSPRTPVPAYTTPRV 592
Query: 512 YHRYR----AWTSATV--SP-TPCPSYQ--RIHTSPRHP 601
H R A+TS V SP TP P+Y R+H SPR P
Sbjct: 593 LHSPRTPVPAYTSPRVHHSPRTPLPAYTSPRVHHSPRTP 631
Score = 28.7 bits (61), Expect = 4.2
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 11/98 (11%)
Frame = +2
Query: 341 STMSCVSPPRNTQSCSLRLPSTPRPTERI*PRS-CSKHSTRPPCTSPSKPCSRCTRPAYH 517
+++ S PR S +P+ P PR+ + T SP P T P H
Sbjct: 687 TSLPAYSTPRVLHSPRTPVPAYTSPRVLHSPRTPLPAYFTPSVHQSPRTPVPVYTSPRVH 746
Query: 518 R-----YRAWTSATV--SP-TPCPSYQ--RIHTSPRHP 601
+ A+T+ V SP TP P+Y R+H SPR P
Sbjct: 747 HSPRTLFPAYTTPHVHQSPRTPVPAYTSPRVHQSPRTP 784
Score = 27.9 bits (59), Expect = 7.4
Identities = 28/76 (36%), Positives = 31/76 (40%), Gaps = 10/76 (13%)
Frame = +2
Query: 398 PSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAYHR-----YRAWTSATV--SP- 553
P TP P PR T P SP T P H A+TS V SP
Sbjct: 612 PRTPLPAYTS-PRVHHSPRTPLPAYSPRTTLPANTTPRVHHSPRTPLPAYTSPRVRHSPR 670
Query: 554 TPCPSYQ--RIHTSPR 595
TP P+Y R+H SPR
Sbjct: 671 TPVPAYTSPRVHQSPR 686
>SB_11574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 35.5 bits (78), Expect = 0.037
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = -3
Query: 552 GDTVAEVQARYRWYAGRVQREHGLDGDVHGGRVECFEHDLGHILSVG-LGVEGSLSEQDW 376
GD A+V + W RV +HGL G C DL ++ G L ++ + W
Sbjct: 202 GDMNAKVGGQ-NWDYERVMGKHGLGVRNDNGERLCELCDLNELVITGTLFPHRTIHKATW 260
Query: 375 VFLGGDTQLIVEGMMPNLLHVIPVSDDSVFDGVFEGQDTSLLCAS 241
+ G T+ ++ ++ N V D VF G D L+CA+
Sbjct: 261 ISPDGKTKNQIDHVLVNKRFRNSVKDTRVFRSADVGSDHYLVCAT 305
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 35.1 bits (77), Expect = 0.049
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +2
Query: 359 SPPRNTQSCSLRLPSTPRPTERI*PRSCSKHST--RPPCTSPSKPCSRCTRPAYHRYR-- 526
SP + + +L S P P P+ C T PC SPS P PA H
Sbjct: 473 SPVSHPPAQALLHTSHPSPATHPSPKPCFTFLTLSTKPCFSPSNPS-----PASHLSPKP 527
Query: 527 AWTSATVSPTPCPSYQRIHTSP 592
+TS T+SP PC ++ + T P
Sbjct: 528 CFTSLTLSPKPCFTFLTLSTKP 549
Score = 31.1 bits (67), Expect = 0.79
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 449 HSTRP-PCTSPSKPCSRCTRPAYHRYRAWTSATVSPTPCPSYQRIHTSP 592
H+T P P T PS P C +T T+SP PC ++ + T P
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPCFTFLTLSTKP 712
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = +2
Query: 398 PSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAYHRYRAWTSATVSPTPC 562
PS P P + P+ C T P KPC T +TS T+SP PC
Sbjct: 514 PSNPSPASHLSPKPCFTSLTLSP-----KPCF--TFLTLSTKPCFTSLTLSPKPC 561
>SB_55183| Best HMM Match : SGS (HMM E-Value=1.6)
Length = 242
Score = 34.7 bits (76), Expect = 0.064
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = -3
Query: 552 GDTVAEVQARYRWYAGRVQREHGLDGDVHGGRVECFEHDLGHILSVG-LGVEGSLSEQDW 376
GD A+V + W RV +HGL G C DL ++ G L ++ + W
Sbjct: 6 GDMNAKVGDQ-NWDYERVMGKHGLGVRNDNGERLCELCDLNELVITGTLFPHRTIHKATW 64
Query: 375 VFLGGDTQLIVEGMMPNLLHVIPVSDDSVFDGVFEGQDTSLLCAS 241
+ G T+ ++ ++ N V D VF G D L+CA+
Sbjct: 65 ISPDGKTKNQIDHVLVNKRFRNSVKDTRVFRSADVGSDHYLVCAT 109
>SB_6304| Best HMM Match : RVT_1 (HMM E-Value=3.2e-18)
Length = 404
Score = 34.7 bits (76), Expect = 0.064
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = -3
Query: 552 GDTVAEVQARYRWYAGRVQREHGLDGDVHGGRVECFEHDLGHILSVG-LGVEGSLSEQDW 376
GD A+V + W RV +HGL G C DL ++ G L ++ + W
Sbjct: 6 GDMNAKVGDQ-NWDYERVMGKHGLGVRNDNGERLCELCDLNELVITGTLFPHRTIHKATW 64
Query: 375 VFLGGDTQLIVEGMMPNLLHVIPVSDDSVFDGVFEGQDTSLLCAS 241
+ G T+ ++ ++ N V D VF G D L+CA+
Sbjct: 65 ISPDGKTKNQIDHVLVNKRFRNSVKDTRVFRSADVGSDHYLVCAT 109
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 33.5 bits (73), Expect = 0.15
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Frame = +2
Query: 338 PSTMSCVSPPRNTQS----CSLRLPSTPR-PTERI*PRSCSKHSTRPPCTSPSKPCSRCT 502
PST S S PR + C+ PSTP P P + HST ++PS P + CT
Sbjct: 21 PSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTHSTPSAPSTPSTPSTPCT 80
Query: 503 RPAYHRYRAWTSATVSPTPCPSYQRIHTSPRHPA 604
P+ + T +T S PS ++P P+
Sbjct: 81 -PSTPSTPS-TPSTPSTPSTPSAPSTPSTPSTPS 112
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +2
Query: 398 PSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAYHRYRAWTSATVSPTPCP 565
P+TP+PT P PP P P + TRP ++T PTP P
Sbjct: 898 PTTPKPTTPAPPPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPP 953
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 377 QSCSLRLPSTPRPTERI*-PRSCSKHSTRPPCTSPSKPCSRCTRP 508
+SC P P I P CS+HS +P C PSK C + P
Sbjct: 1499 ESCKPNCPIKCCPATAIKCPVGCSEHSCKPEC--PSKCCMKVLPP 1541
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 31.9 bits (69), Expect = 0.45
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = +2
Query: 338 PSTMSCVSPPRNTQSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRP--- 508
PS+ + S R T S+ ++ R R RS S+ +R P S S+ S P
Sbjct: 392 PSSSTRKSRRRYTDEESVGSDASSR--SRSYSRSASRSYSRSPVRSWSRSHSPSLSPQRS 449
Query: 509 -AYHRYRAWT-SATVSPTPCPSYQRIHTSPRH 598
+Y R R+ + S ++S +P P Y R PRH
Sbjct: 450 RSYSRSRSRSFSKSISGSPTPKYTRTTVKPRH 481
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.60
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 271 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEASLNPKANRE 423
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.60
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 168 GNTARGASSPAKPALHIPEPLSTT 97
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.60
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 168 GNTARGASSPAKPALHIPEPLSTT 97
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_22045| Best HMM Match : Amelogenin (HMM E-Value=0.23)
Length = 149
Score = 31.1 bits (67), Expect = 0.79
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +2
Query: 338 PSTMSCVSP-PRNTQSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAY 514
P T SP P N Q P T P + P H RP ++P P P
Sbjct: 48 PITSEAQSPAPPNHQYT----PITSAPQSPVPPN----HQCRPITSTPQSPV-----PPN 94
Query: 515 HRYRAWTSATVSPT-PCPSYQRIHTSPRHPAV 607
H++R TSA SP P Y+ I ++P+ P +
Sbjct: 95 HQHRPITSAAQSPVPPNHQYRPITSTPQSPVL 126
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +2
Query: 389 LRLPSTPRPTERI*PRSCSKHSTRPP-CTSPSKPCSRCTRPAYHRYRAWTSATVSPTPCP 565
+R+PS R T C+ + P SP+ ++ P+ H++R TS SP P P
Sbjct: 1 MRIPSAIRHTCASNMSYCNTSNPNPNHAYSPATSTAQSPVPSNHQHRPITSEAQSPAP-P 59
Query: 566 SYQ--RIHTSPRHP 601
++Q I ++P+ P
Sbjct: 60 NHQYTPITSAPQSP 73
>SB_32564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 31.1 bits (67), Expect = 0.79
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = -3
Query: 516 WYAGRVQREHGLDGDVHGGRVECFEHDLGH-ILSVGLGVEGSLSEQDWVFLGGDTQLIVE 340
W RV +HGL G C DL +++ L ++ + W+ G T+ ++
Sbjct: 45 WDYERVMGKHGLGVRNDNGERLCELCDLDELVITATLFPHRTIHKATWISPDGKTKNQID 104
Query: 339 GMMPNLLHVIPVSDDSVFDGVFEGQDTSLLCAS 241
++ N V D VF G D L+CA+
Sbjct: 105 HVLVNKRFRNSVKDTRVFRSSDVGSDHYLVCAT 137
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISNIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISNIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_45219| Best HMM Match : rve (HMM E-Value=3e-14)
Length = 360
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Frame = +2
Query: 431 PRSCSKHSTRPP-CTSPSKPCSRCTRPAYHRYRAWTSAT----VSPTPCPSYQRIHTSPR 595
P+ K PP C + + P R P+ HR R W S+ + TP P H S +
Sbjct: 96 PKQSLKCRCGPPSCPTTTSPAKRRRTPSSHRVRKWVSSQPVGGYTQTPPPPTTYAHFSEQ 155
Query: 596 HP 601
P
Sbjct: 156 IP 157
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 168 GNTARGASSPAKPALHIPEPLSTT 97
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -1
Query: 374 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMG--YLRVRIPLCSVPHLQHKSPSVPYRPS 201
CS + + C + ++V CS Y+ V +CS + H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 200 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 108
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = -2
Query: 259 LFALCLISNI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQ 95
+FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 461 IFATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNK 519
Query: 94 RGNFFVAHLE 65
G V L+
Sbjct: 520 HGQVDVLLLD 529
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISNIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISNIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Frame = +2
Query: 341 STMSCVSPPRNTQSCSLRLPSTPRPTER---I*PRSCSKHSTRPPCTSPSKPCSRCTRPA 511
+T + P T+ C+ + +T PT + P + +T+PP T P T+P
Sbjct: 118 TTKPRTTKPHTTKPCTTKPHTTKPPTTKPQTTKPHTTKPRTTKPPTTKPHTTKPHTTKPH 177
Query: 512 YHRYRAWTSATVSPT-PCPS 568
+ + PT P P+
Sbjct: 178 TTKPHTTKPHNIDPTLPSPT 197
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +2
Query: 398 PSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAYHRYRAWTSATVSP-TPCPSYQ 574
P T +P P + H+T+PP T P T+P + T P T P
Sbjct: 121 PRTTKP-HTTKPCTTKPHTTKPPTTKPQTTKPHTTKPRTTKPPTTKPHTTKPHTTKPHTT 179
Query: 575 RIHTSPRH 598
+ HT+ H
Sbjct: 180 KPHTTKPH 187
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 365 PRNTQSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRP 508
PR T+ + + P T +P I P + H+T+P T P R T+P
Sbjct: 36 PRTTKPHTTK-PHTTKP-HTIKPHTTKPHTTKPHTTKPHTTKPRTTKP 81
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = +2
Query: 341 STMSCVSPPRNTQSCSLRLPSTPRPT--ERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAY 514
ST + PP + + + +TP T P + + +T P T+P R T P
Sbjct: 1760 STTKYIPPPHSPPTTTTTTTTTPETTAPRTTTPETTTPETTTPRTTTPETTKPRTTTPKT 1819
Query: 515 HRYRAWTSATVSPTP 559
+ T+A +P P
Sbjct: 1820 TTPKKTTAAKKAPLP 1834
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/74 (27%), Positives = 30/74 (40%)
Frame = +2
Query: 338 PSTMSCVSPPRNTQSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAYH 517
P+T + + T + P T P E PR+ + +T+P T+P + T A
Sbjct: 1772 PTTTTTTTTTPETTAPRTTTPETTTP-ETTTPRTTTPETTKPRTTTPKTTTPKKTTAAKK 1830
Query: 518 RYRAWTSATVSPTP 559
T AT S P
Sbjct: 1831 APLPVTHATTSHAP 1844
>SB_54038| Best HMM Match : CHCH (HMM E-Value=0.44)
Length = 75
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +2
Query: 338 PSTMS-CVSPPRNTQSCSLRLPSTPRPTERI*PRSCSKHSTRPP----CTSPSKPCSRCT 502
P+ MS C PP C+ + R T++ P S+ + +P CT P SRCT
Sbjct: 8 PNEMSRCTQPPHEMSRCTQQPHEMSRCTQQ--PHEMSRCTQQPHEMSRCTQPQHEMSRCT 65
Query: 503 R 505
+
Sbjct: 66 Q 66
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = +2
Query: 362 PPRNTQSCSLRLPSTPRPTERI*PR--SCSKHSTR--PPCTSPSKPCSRCT-RPAYHR 520
PP S LP+ P P+ R+ + +H+ PP PSKP + RPAY +
Sbjct: 1237 PPELDGDASCLLPAPPPPSRRLDLKDTQTKRHNPNLPPPVPPPSKPTDKSNLRPAYKK 1294
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISNIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISNIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 386 SLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAYHRYRA 529
SL S P+ E + +C H+ R P T+PS PC + Y A
Sbjct: 342 SLYKQSDPQKHEDLAVWACYSHARREPSTAPSLPCDLVAATSAKMYLA 389
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISNIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISNIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 280 PIEHGIVTNWDDMEKIWHHTFYNE 351
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 83 EVAALVVDNGSGMCKAGFAGDDAPRAV 163
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = +2
Query: 338 PSTMSCVSPPRNTQSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAYH 517
P+T S +P + T + + P+TP P S T +P+KP P
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTP 115
Query: 518 RYRAWTSATVSP-TPCPS 568
A T +P TP P+
Sbjct: 116 TPTAHTPTKPTPKTPTPT 133
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +2
Query: 338 PSTMSCVSPPRNTQSCSLRLPST-PRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAY 514
P+T + +P T + + P+T P PT+ P + + + P +P+KP + P
Sbjct: 76 PTTPTPKTPTPTTSTLTKPTPATTPTPTKPT-PTAHTPTTPTPTAHTPTKPTPKTPTPTT 134
Query: 515 HRYRAWTSATVSPT 556
A T T +PT
Sbjct: 135 PTPTAHTPTTPTPT 148
>SB_37149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 501 RVRRTTGIVPGLPRRCLPHRAHLTKGYTLPHAIL 602
R RR G VPGL RC ++ + TK +T P L
Sbjct: 4 RQRRHVGTVPGLLGRC--YKRYFTKNFTRPRRYL 35
>SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24)
Length = 1592
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 405 VEGSLSEQDWVFLGGDTQLIVEGMMPNLLHVI 310
+ SL++Q+W + D Q+IVEG M N ++I
Sbjct: 1329 IRQSLTKQEWRWQMDDPQMIVEGAMQNHYNMI 1360
>SB_27401| Best HMM Match : SCP (HMM E-Value=9e-23)
Length = 1105
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +2
Query: 374 TQSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAYHRYRAWTSATVSP 553
TQ+ P+T T + +ST PP T+P + +++YRA +AT
Sbjct: 499 TQTTPTTGPATGNTTTPTIQPIAADNSTSPPTTTPMGQVMKRVMETHNKYRALHNATAMS 558
Query: 554 TPC 562
C
Sbjct: 559 LSC 561
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 398 PSTPR---PTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAYHRYRAWTSATVSPTP 559
PST R TER P C++ + PCT PC+ P RY +V+P P
Sbjct: 653 PSTERYTPSTERYTP--CTERYS--PCTERYTPCTERYTPCTERYTPCNDLSVTPYP 705
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/66 (33%), Positives = 27/66 (40%)
Frame = +2
Query: 365 PRNTQSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAYHRYRAWTSAT 544
P S PS TER P C++ PCT PC+ P+ RY T +T
Sbjct: 610 PSQVNSERYNAPSQSPCTERYTP--CTERYI--PCTERYTPCTERYTPSTERY---TPST 662
Query: 545 VSPTPC 562
TPC
Sbjct: 663 ERYTPC 668
Score = 27.9 bits (59), Expect = 7.4
Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 11/102 (10%)
Frame = +2
Query: 359 SPPRNTQSCSLRLPSTPRPT---ERI*P---RSCSKHSTRPPCTSPSKPCSRCTRPAYHR 520
S R T PST R T ER P R PC PC++ P+ R
Sbjct: 810 STERYTPCTERYTPSTKRYTPCYERYTPCIERYTPSTKRYTPCYERYTPCTKRYIPSAKR 869
Query: 521 YRAWTSATVSPTPC-----PSYQRIHTSPRHPAVWTLARRDL 631
Y T T TPC PS + H P+ P + L R ++
Sbjct: 870 Y---TPCTERYTPCTKRYTPSTEPSHAPPK-PTLQALGRHEI 907
>SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 526
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +2
Query: 431 PRSCSKHSTRPPCTS-PSKPCSRCTRPAYHRYRAWTSATVS-PTPC 562
P +H PP +S PC T HR+ AT S PTPC
Sbjct: 5 PHPLLRHHPPPPASSSSPTPCYGITPHPLHRHHLPPPATASPPTPC 50
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 401 STPRPTERI*PRSCSKHSTRPPCT-SPSKPCSRCTRPAYHRY 523
S+P P I P +H PP T SP PC HR+
Sbjct: 20 SSPTPCYGITPHPLHRHHLPPPATASPPTPCIVIISHPLHRH 61
>SB_59484| Best HMM Match : CHCH (HMM E-Value=0.18)
Length = 125
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +2
Query: 353 CVSPPRNTQSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAYHRYR 526
C PP C+ + R T++ P S+ CT P SRCT+P + R
Sbjct: 34 CTQPPHEMSRCTQQPNKMSRCTQQ--PNEMSR------CTQPPHEMSRCTQPPHEMSR 83
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 402 QPQGQQREYD-PDHVRNIQHARHVRLHPSRALAVRVRRTTGIVPG 533
Q QG Q + + P V + H R HP+ L ++ GI+PG
Sbjct: 2325 QQQGVQMQVNQPQGVMEVSHQRFALRHPAPGLPPPPQQVPGILPG 2369
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
Frame = -1
Query: 311 SQLVTIPCSMGYLRVRIPLCSVPHLQHKS---------PSVPYRPSRPDGGAFP 177
S+ ++IP G+ R L P L H S P+ PY PS+ G +FP
Sbjct: 3759 SKPISIPSRDGHARAATSLPGSPQLSHLSGRFSSDDVSPTPPYSPSQKQGFSFP 3812
>SB_31262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 341 STMSCVSPPRNTQSCSLRLPS-TPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCT 502
S++S SP + SL S T PT R PRS S+ R P T PS P + T
Sbjct: 178 SSISPASPALRSSLGSLAPTSRTSTPTSRSTPRSRSRSRARTPST-PSTPSTPST 231
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 168 GNTARGASSPAKPALHIPEPLSTT 97
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = +2
Query: 341 STMSCVSPPRNTQSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAYHR 520
+T +P T + +TPR T P + + +T P T+P R T P
Sbjct: 164 TTPETTAPRTTTPETTTPETTTPRTTT---PVTTTPRTTTPETTTPETTTPRTTTPETTT 220
Query: 521 YRAWTSATVSPTP 559
+ T+A +P P
Sbjct: 221 PKKTTAAKKAPLP 233
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 168 GNTARGASSPAKPALHIPEPLSTT 97
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_48330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/55 (32%), Positives = 22/55 (40%)
Frame = +2
Query: 332 IIPSTMSCVSPPRNTQSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSR 496
++P T V P S L +TPR T P S S P T +PC R
Sbjct: 452 VLPCTRWTVPQPAYFHSRGSPLRTTPRGTSTTVPLYASTFSPLWPGTGTGRPCLR 506
>SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 1093
Score = 28.3 bits (60), Expect = 5.6
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +2
Query: 335 IPSTMSCVSPPRNT--QSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRP 508
+ S C+SPP+NT Q C +L S P + I P K++ + C S + +C P
Sbjct: 807 LESPKQCISPPKNTLKQVCPSQLES---PKQCISP---PKNTLKQVCPSQLESPKQCISP 860
Query: 509 AYHRYR-AWTSATVSPTPCPS 568
+ + S SP C S
Sbjct: 861 LKNTLKQVCPSQLESPKQCIS 881
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 335 IPSTMSCVSPPRNT--QSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPC 490
+ S C+SPP+NT Q C +L S P+ ++ + P++ K + SP +PC
Sbjct: 873 LESPKQCISPPKNTLKQVCPSQLES-PKQSD-LSPKNTLKQAGPSQLESP-EPC 923
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISNIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_42662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1054
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +1
Query: 166 PLDRGKAPPSGRDGRYGTEG-LLCWR*GTEQR--GILTLK 276
PLD G +GR GR G G LL WR G E G+LTL+
Sbjct: 907 PLDYGSGGGNGR-GRGGAGGGLLHWRIGQEIELDGLLTLR 945
>SB_37182| Best HMM Match : DUF225 (HMM E-Value=1)
Length = 1282
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 2/91 (2%)
Frame = -1
Query: 374 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRI-PL-CSVPHLQHKSPSVPYRPS 201
CS + + C +S Q++ CS V + P+ CS + H+ P
Sbjct: 232 CSPSRADVDMFPIACSCRCVSHQVLMSMCSPSRAHVDVFPIACSCRCVSHRVLMSMCSPL 291
Query: 200 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 108
FP + R HH+L + T R+H
Sbjct: 292 SAHVDVFPIACSCRCVSHHVLMSMSSTLRAH 322
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +2
Query: 359 SPPRNTQSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSPSKPCSRCTRPAYHRYRAWTS 538
SPP+ + S PS+P PT+ + + S++ P TS + + +P+ R + +S
Sbjct: 147 SPPKPSARTSA--PSSPSPTKHPTWEASPEKSSKAPSTSKKQSAAEKAKPS--RVTS-SS 201
Query: 539 ATVSPTPCPS 568
T PT PS
Sbjct: 202 GTDKPTTRPS 211
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISNIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISNIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_59727| Best HMM Match : C2 (HMM E-Value=0.0018)
Length = 482
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 356 VSPPRNTQSCSLRLPSTPRPTERI*PRSCSKHSTRPPCTSP 478
V+PP T S R+P+ P+ + P S S +T P C SP
Sbjct: 226 VTPPPPTFPVSSRVPTPPQGQGLVPPMSSSAGNT-PRCLSP 265
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISNIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISNIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L LC + ++LSH + H L +HG R +SCET L T
Sbjct: 854 LTCLCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISNIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_12076| Best HMM Match : CHCH (HMM E-Value=0.28)
Length = 115
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +2
Query: 338 PSTMS-CVSPPRNTQSCSLRLPSTPRPTERI*PRSCSKHSTRPP----CTSPSKPCSRCT 502
P MS C PP C+ R T++ P S+ + +P CT P SRCT
Sbjct: 18 PHEMSRCTQPPHEMSRCTQPPHEMSRCTQQ--PNEMSRCTQQPHEMSRCTQPPHEMSRCT 75
Query: 503 R 505
+
Sbjct: 76 Q 76
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISNIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISNIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISNIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 183 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 73
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 473 SPSKPCSRCTRPAYHRYRAWTSAT---VSPTPCPSYQRIHTSPRH 598
SP + ++ TRP Y WT ++ P Y+ I T PR+
Sbjct: 865 SPYEHITKWTRPPYEHITKWTRPPYEHITKWTRPPYEHITTRPRY 909
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 27.5 bits (58), Expect = 9.7
Identities = 24/70 (34%), Positives = 33/70 (47%)
Frame = -1
Query: 320 SMSSQLVTIPCSMGYLRVRIPLCSVPHLQHKSPSVPYRPSRPDGGAFPRSRGTRREEHHL 141
+++SQ VT M R +PL S P KSP V + P PD + R E HH
Sbjct: 792 ALTSQQVTSSHDMP--RTSMPLVSYPPHMKKSPFVVHHP--PDSAS--RHGNQAPEAHH- 844
Query: 140 LRNRPCTYRS 111
+ P +Y+S
Sbjct: 845 --HEPGSYKS 852
>SB_7678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1432
Score = 27.5 bits (58), Expect = 9.7
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Frame = +2
Query: 365 PRNTQSCSLRLPSTPRPTERI*PRSCSK-HSTRPPCTSPSKPCSRCTRPAYHRYRAWTSA 541
P +C+L P+ P P R PR + PP P + R RP R + +
Sbjct: 1223 PLTGPACALEQPAVPVPRPRGRPRKQAPIQPLHPP--GPVQSKKRFGRPRKQRTMTFGAG 1280
Query: 542 TVSPTPCPSYQRIHTSPRHPAVWTLARRDLT 634
T+ P + + T R AV ++ D T
Sbjct: 1281 TIGPAAIDNRETDTTEDR--AVVDVSETDTT 1309
>SB_38059| Best HMM Match : Zfx_Zfy_act (HMM E-Value=2.6)
Length = 722
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Frame = +2
Query: 374 TQSCSLRLPSTPRPTERI*------PRSCSKHSTRP-PCTSPSKPCSRCTRPAYHRYRAW 532
+QSCS P +P + I PR + T+ P S +KPCS R + +
Sbjct: 616 SQSCSNIKPEISKPRDGIKRPVSGDPRRSNTEKTKAIPILSENKPCSDDVRGVDNVVSRY 675
Query: 533 TSATVSPTPCPSYQRI 580
S+ + T C Y +
Sbjct: 676 PSSASAETGCAVYMNL 691
>SB_25282| Best HMM Match : rve (HMM E-Value=6.3e-12)
Length = 451
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2
Query: 488 CSRCTRPAYHRYRAWTSATVSPTPCPSYQRIHTS---PRH-PAVWTL 616
CS +R + R +T + + +P P + TS PRH PA W L
Sbjct: 147 CSAASRRPFSILRVYTGSALRGSPMPFSEGAPTSERPPRHYPACWRL 193
>SB_434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 624 RRAKVQTAGWRGEVCILW 571
RR+ V+TAGWR C W
Sbjct: 243 RRSPVETAGWRWLACSQW 260
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,494,777
Number of Sequences: 59808
Number of extensions: 650401
Number of successful extensions: 2592
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 2145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2540
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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