Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0298
         (712 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q647F4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_UPI00015A45F6 Cluster: Genetic suppressor element 1.; n...    33   9.2  
UniRef50_Q1X7K1 Cluster: Excreted/secreted protein 78; n=1; Leis...    33   9.2  

>UniRef50_Q647F4 Cluster: Putative uncharacterized protein; n=1;
           Thermoproteus tenax spherical virus 1|Rep: Putative
           uncharacterized protein - Thermoproteus tenax spherical
           virus 1
          Length = 212

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 15/60 (25%), Positives = 30/60 (50%)
 Frame = -1

Query: 226 LIHAYIFGLLFASVSILDMMHRLTLNIFAIALSLASNE*RTSCTPYFCNNLNDVRISCYI 47
           LIH+Y+F   FA   + ++++   L  + + +        +S  P+ C+N+  +   CYI
Sbjct: 77  LIHSYLFTFSFAETKVFEVLYDARLGAYGVVMQNKFMP-LSSLEPFVCDNVVGLTRLCYI 135


>UniRef50_UPI00015A45F6 Cluster: Genetic suppressor element 1.; n=1;
            Danio rerio|Rep: Genetic suppressor element 1. - Danio
            rerio
          Length = 1092

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
 Frame = +2

Query: 230  RRTNKGSILHTAHGDSKMDSRDLCAMMVFDNDRHYQGQDA*TQEREQGDSLRACHVKITS 409
            R+TN  S   +AH DS + S DL A     +D   + +++ +   +  +S+   + +   
Sbjct: 954  RQTNGHSWPVSAHRDSPVVSNDLSAGEGISSDED-EEEESFSPRWKGIESIFTAYEEYIE 1012

Query: 410  THSTLHHLIPTVC----IQEHNLGNIVDQLCTSLQDIKITK 520
              S  HH++ + C     Q +NL    +QL  S++D+   K
Sbjct: 1013 ERSIEHHVLQSECRRLETQHYNLSVTAEQLSHSMRDLLAQK 1053


>UniRef50_Q1X7K1 Cluster: Excreted/secreted protein 78; n=1;
           Leishmania major|Rep: Excreted/secreted protein 78 -
           Leishmania major
          Length = 174

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 293 LVSPFYYRRGPCVKSILCLSFVTNTCLYLWPVVC 192
           L+ PF++ R PC  S     F T+T L  +P+ C
Sbjct: 32  LLPPFFFHRAPCRASTTLTVFHTSTQLLRYPITC 65


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,521,918
Number of Sequences: 1657284
Number of extensions: 14360352
Number of successful extensions: 29000
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28997
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)