Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0296
         (650 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B56C6 Cluster: PREDICTED: similar to ENSANGP000...    48   3e-04
UniRef50_Q12840 Cluster: Kinesin heavy chain isoform 5A; n=121; ...    45   0.001
UniRef50_Q4TBE0 Cluster: Chromosome undetermined SCAF7138, whole...    36   0.64 
UniRef50_UPI000065D5F1 Cluster: Kinesin heavy chain isoform 5A (...    36   0.84 
UniRef50_Q4S807 Cluster: Chromosome 9 SCAF14710, whole genome sh...    36   0.84 
UniRef50_Q8IDJ3 Cluster: Putative uncharacterized protein MAL13P...    33   5.9  

>UniRef50_UPI00015B56C6 Cluster: PREDICTED: similar to
           ENSANGP00000022750; n=2; Apocrita|Rep: PREDICTED:
           similar to ENSANGP00000022750 - Nasonia vitripennis
          Length = 1004

 Score = 47.6 bits (108), Expect = 3e-04
 Identities = 23/40 (57%), Positives = 31/40 (77%)
 Frame = +2

Query: 59  VEKLEAELNRWRSGETVRLEEQVNLQEIEAVTPVTSFIEE 178
           VEKLE+EL+RWR GETV+ EEQV+LQ+   VT  ++ I +
Sbjct: 370 VEKLESELSRWRQGETVKPEEQVSLQDGPDVTTPSNEISK 409



 Score = 41.9 bits (94), Expect = 0.013
 Identities = 25/56 (44%), Positives = 28/56 (50%)
 Frame = +1

Query: 256 LYQQLDDKDEEINQHSQLVXXXXXXXXXXXXXIACTR*DNLNLIWTLHYSRSEGES 423
           LYQQLDDKDEEINQ SQ V             IA  R D   L   ++  + E ES
Sbjct: 459 LYQQLDDKDEEINQQSQFVEKLKEQMEEQEELIASARRDYEQLQQEMNRIQQENES 514


>UniRef50_Q12840 Cluster: Kinesin heavy chain isoform 5A; n=121;
           Bilateria|Rep: Kinesin heavy chain isoform 5A - Homo
           sapiens (Human)
          Length = 1032

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 23/59 (38%), Positives = 33/59 (55%)
 Frame = +1

Query: 247 VRSLYQQLDDKDEEINQHSQLVXXXXXXXXXXXXXIACTR*DNLNLIWTLHYSRSEGES 423
           +R LY+QLDDKD+EINQ SQL+             +  TR DN  +   L + +SE ++
Sbjct: 421 IRRLYKQLDDKDDEINQQSQLIEKLKQQMLDQEELLVSTRGDNEKVQRELSHLQSENDA 479


>UniRef50_Q4TBE0 Cluster: Chromosome undetermined SCAF7138, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF7138,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 1060

 Score = 36.3 bits (80), Expect = 0.64
 Identities = 15/24 (62%), Positives = 20/24 (83%)
 Frame = +2

Query: 59  VEKLEAELNRWRSGETVRLEEQVN 130
           V+KLE EL RWR GE+V +EEQ++
Sbjct: 478 VQKLENELKRWRKGESVPVEEQLS 501


>UniRef50_UPI000065D5F1 Cluster: Kinesin heavy chain isoform 5A
           (Neuronal kinesin heavy chain) (NKHC) (Kinesin heavy
           chain neuron-specific 1).; n=1; Takifugu rubripes|Rep:
           Kinesin heavy chain isoform 5A (Neuronal kinesin heavy
           chain) (NKHC) (Kinesin heavy chain neuron-specific 1). -
           Takifugu rubripes
          Length = 985

 Score = 35.9 bits (79), Expect = 0.84
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +1

Query: 247 VRSLYQQLDDKDEEINQHSQLV 312
           +R LY+QLDDKD+EIN   QLV
Sbjct: 368 IRKLYKQLDDKDDEINLQCQLV 389


>UniRef50_Q4S807 Cluster: Chromosome 9 SCAF14710, whole genome
           shotgun sequence; n=4; Eumetazoa|Rep: Chromosome 9
           SCAF14710, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 1040

 Score = 35.9 bits (79), Expect = 0.84
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +1

Query: 247 VRSLYQQLDDKDEEINQHSQLV 312
           +R LY+QLDDKD+EIN   QLV
Sbjct: 454 IRKLYKQLDDKDDEINLQCQLV 475



 Score = 33.9 bits (74), Expect = 3.4
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = +2

Query: 59  VEKLEAELNRWRSGETV 109
           ++KLEAELNRWR+GE V
Sbjct: 392 IQKLEAELNRWRNGEDV 408


>UniRef50_Q8IDJ3 Cluster: Putative uncharacterized protein
           MAL13P1.254; n=1; Plasmodium falciparum 3D7|Rep:
           Putative uncharacterized protein MAL13P1.254 -
           Plasmodium falciparum (isolate 3D7)
          Length = 261

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = -2

Query: 436 LVSILILPLNVSNEVSKLSLNYLTLCRQLILLVPSSVP 323
           L++  ++   + N   KLS NYLT  + LI+ VPS+VP
Sbjct: 171 LINDQLMENELKNPTWKLSFNYLTGTKVLIITVPSAVP 208


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,320,986
Number of Sequences: 1657284
Number of extensions: 8584229
Number of successful extensions: 18372
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18365
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)