Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0294
         (580 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    26   0.77 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   0.77 
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    26   0.77 
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    25   1.8  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    25   2.3  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 26.2 bits (55), Expect = 0.77
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +3

Query: 291 NTKNDGNQNDFG-GPKQFRPRNNFNNGNQPPKKNNFNGDKSPGN 419
           NT N GN N+ G G  Q +P +  N G      NN N + +  N
Sbjct: 68  NTGNSGNNNNNGVGNHQQQP-SPVNEGTGKTNNNNNNNNNNGSN 110



 Score = 23.4 bits (48), Expect = 5.4
 Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
 Frame = +3

Query: 414 GNMQYGNKNDFGGPKQQNYNKNYGP-KTYNNQN 509
           GN    N N  G  +QQ    N G  KT NN N
Sbjct: 70  GNSGNNNNNGVGNHQQQPSPVNEGTGKTNNNNN 102


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 26.2 bits (55), Expect = 0.77
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +3

Query: 411 PGNMQY-GNKNDFGGPKQQNYNKNYGPK 491
           PG++ Y G K D G P    Y  + GPK
Sbjct: 133 PGSLGYPGEKGDLGTPGPPGYPGDVGPK 160


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 26.2 bits (55), Expect = 0.77
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = +3

Query: 333 KQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQYGNKNDFGGPKQQNYNKNYG 485
           +Q RP         PP++    GD++P +      +    P + N++++YG
Sbjct: 386 QQSRPTIPAPQQQTPPRQPPATGDRAPAHPDVEQIDPDHQPTESNFDEDYG 436


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = +3

Query: 375 PPKKNNFNGDKSPGNMQYGNKNDFGGPKQQNYNKNYG 485
           PP++    GD++P +      +    P + N++++YG
Sbjct: 401 PPRQPPATGDRAPAHPDVEQIDPDHQPTESNFDEDYG 437


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
 Frame = +3

Query: 351 NNFNNGNQPPKKNNFNGDKSPGNMQYGN--KNDFGGPKQQNYNKNYGPKTYNNQNAMGMS 524
           NN  N N  P      G ++ G         N + G   Q +   Y P++YN     G +
Sbjct: 23  NNSQNTNSSPNTAGSQGSQNDGYFPPSTYAPNIYPGTPHQAH---YSPQSYNPLAGAGAT 79

Query: 525 SLN 533
           S+N
Sbjct: 80  SVN 82


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,539
Number of Sequences: 2352
Number of extensions: 13847
Number of successful extensions: 44
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)