Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0294
(580 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18810.1 68416.m02389 protein kinase family protein contains ... 46 2e-05
At1g28400.1 68414.m03492 expressed protein similar to E6 (GI:100... 41 7e-04
At1g53260.1 68414.m06035 hypothetical protein low similarity to ... 38 0.004
At5g61030.1 68418.m07659 RNA-binding protein, putative similar t... 30 0.97
At2g40955.1 68415.m05057 hypothetical protein 30 0.97
At1g10620.1 68414.m01204 protein kinase family protein contains ... 30 0.97
At5g55670.1 68418.m06941 RNA recognition motif (RRM)-containing ... 30 1.3
At2g17110.1 68415.m01974 expressed protein 29 1.7
At1g79090.2 68414.m09222 expressed protein 11408 (cDNA not full... 29 1.7
At1g79090.1 68414.m09221 expressed protein 11408 (cDNA not full... 29 1.7
At4g15096.1 68417.m02320 hypothetical protein 29 2.2
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 29 2.2
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 29 2.2
At3g15000.1 68416.m01897 expressed protein similar to DAG protei... 29 2.2
At1g71410.1 68414.m08247 protein kinase family protein contains ... 29 2.2
At5g65070.1 68418.m08185 MADS-box protein (MAF4) contains Pfam p... 29 3.0
At4g28300.2 68417.m04053 hydroxyproline-rich glycoprotein family... 28 3.9
At4g28300.1 68417.m04052 hydroxyproline-rich glycoprotein family... 28 3.9
At2g06860.1 68415.m00768 Ulp1 protease family protein contains P... 28 3.9
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 28 5.2
At4g25750.1 68417.m03707 ABC transporter family protein Bactroce... 27 6.8
At3g04980.1 68416.m00541 DNAJ heat shock N-terminal domain-conta... 27 6.8
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 27 6.8
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 27 6.8
At5g52710.1 68418.m06543 heavy-metal-associated domain-containin... 27 9.0
At5g43250.1 68418.m05285 transcription factor, putative similar ... 27 9.0
At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kina... 27 9.0
At3g25590.1 68416.m03186 expressed protein 27 9.0
At2g20760.1 68415.m02440 expressed protein 27 9.0
At1g32830.1 68414.m04046 hypothetical protein similar to At2g049... 27 9.0
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 45.6 bits (103), Expect = 2e-05
Identities = 28/82 (34%), Positives = 38/82 (46%)
Frame = +3
Query: 255 PRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQYGN 434
P+ + N N+ N ND N N+ G NN NN + NN NG+ + GN GN
Sbjct: 67 PQGNNNNDGNNGNNNNDNNNNNNGNNNN--DNNNGNNKDNNNNGNNNNGNNNNGNDNNGN 124
Query: 435 KNDFGGPKQQNYNKNYGPKTYN 500
N+ G N N+N G + N
Sbjct: 125 NNN--GNNNDNNNQNNGGGSNN 144
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/76 (31%), Positives = 33/76 (43%)
Frame = +3
Query: 261 NDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQYGNKN 440
ND N N+ + N+ N N+ ++N NNGN NN NG+ + GN GN N
Sbjct: 73 NDGNNGNNNNDNNNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNN-NGNDNNGNNNNGNNN 131
Query: 441 DFGGPKQQNYNKNYGP 488
D + N P
Sbjct: 132 DNNNQNNGGGSNNRSP 147
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/73 (32%), Positives = 27/73 (36%)
Frame = +3
Query: 309 NQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQYGNKNDFGGPKQQNYNKNYGP 488
N ND NN NNGN NN N + N N N+ G N N
Sbjct: 71 NNNDGNNGNNNNDNNNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNNNGNDNNGNNNNGNN 130
Query: 489 KTYNNQNAMGMSS 527
NNQN G S+
Sbjct: 131 NDNNNQNNGGGSN 143
Score = 31.9 bits (69), Expect = 0.32
Identities = 18/73 (24%), Positives = 29/73 (39%)
Frame = +3
Query: 261 NDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQYGNKN 440
N+ N N+ + N N+++ NN N N N N D + N G+ N
Sbjct: 85 NNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNNNGNDNNGNNNNGNNNDNNNQNNGGGSNN 144
Query: 441 DFGGPKQQNYNKN 479
P +N ++N
Sbjct: 145 RSPPPPSRNSDRN 157
Score = 31.5 bits (68), Expect = 0.42
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = +3
Query: 345 PRNNFNNGNQPPKKNNFNGDKSPGNMQYGNKNDFGGPKQQNYNKNYGPKTYNNQNAMGMS 524
P ++ N QPP ++ +SP + Q N ND N N N NN N G +
Sbjct: 46 PDDSSNGSPQPPSSDS----QSPPSPQGNNNNDGNNGNNNNDNNNNNNGNNNNDNNNGNN 101
Query: 525 SLNLFLGN 548
N GN
Sbjct: 102 KDNNNNGN 109
Score = 27.9 bits (59), Expect = 5.2
Identities = 21/71 (29%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Frame = +3
Query: 300 NDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNM-QYGNKNDFGGPKQQNYNK 476
++G+ Q P NN N NN N D + N N N+ G K N N
Sbjct: 50 SNGSPQPPSSDSQSPPSPQGNNNNDGNNGNN-NNDNNNNNNGNNNNDNNNGNNKDNNNNG 108
Query: 477 NYGPKTYNNQN 509
N NN N
Sbjct: 109 NNNNGNNNNGN 119
>At1g28400.1 68414.m03492 expressed protein similar to E6
(GI:1000090) [Gossypium barbadense]
Length = 335
Score = 40.7 bits (91), Expect = 7e-04
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
Frame = +3
Query: 234 YDEQKLQPRNDFNEVKNDYNTKNDG--NQNDFGGPKQFRPRNNFNNGNQP-PKKNNFNGD 404
Y + N+ N+ + + N KND N F P +FNN + PKK G
Sbjct: 85 YGHETTYNNNNDNKEEFNNNNKNDEKVNSKTFSTPSLSETEESFNNYEENYPKKTENYGT 144
Query: 405 KSPGNMQYGNKN---DFGGPKQQNYNK---NYGPKTYNNQN 509
K N ++ N N D ++ N NK NY + +NN N
Sbjct: 145 KGYNNEEFNNNNNKYDANFKEEFNNNKYDENYAKEEFNNNN 185
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/90 (22%), Positives = 35/90 (38%)
Frame = +3
Query: 213 KLWTKT*YDEQKLQPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNN 392
K+ +KT + FN + +Y K + ++F NN + N + NN
Sbjct: 110 KVNSKTFSTPSLSETEESFNNYEENYPKKTENYGTKGYNNEEFNNNNNKYDANFKEEFNN 169
Query: 393 FNGDKSPGNMQYGNKNDFGGPKQQNYNKNY 482
D++ ++ N N+ NYN Y
Sbjct: 170 NKYDENYAKEEFNNNNN-----NNNYNYKY 194
>At1g53260.1 68414.m06035 hypothetical protein low similarity to
SP|Q38732 DAG protein, chloroplast precursor
{Antirrhinum majus}
Length = 358
Score = 38.3 bits (85), Expect = 0.004
Identities = 34/100 (34%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Frame = +3
Query: 261 NDFNEVKNDYNTKN-DGNQNDFGGPKQ-FR--PRNNFNNGNQPPKKNNFNGDKSPGNMQY 428
N NE + +N DG +ND G +R P N G PP + N P ++Q
Sbjct: 162 NATNENRRPRRPRNSDGGRNDRGNQDTGYRRPPPNQGMGGAPPPPPHIGNNPNMPPHIQP 221
Query: 429 GNKNDF--GGPKQQNYNKNY-GPKTYN-NQNAMGMSSLNL 536
N N G P N N+NY GP N NQN G N+
Sbjct: 222 PNMNQNYRGPPPPPNMNQNYQGPPAPNMNQNYQGPPPSNM 261
>At5g61030.1 68418.m07659 RNA-binding protein, putative similar to
RNA-binding protein from [Solanum tuberosum]
GI:15822705, [Nicotiana tabacum] GI:15822703, [Nicotiana
sylvestris] GI:624925; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 309
Score = 30.3 bits (65), Expect = 0.97
Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +3
Query: 291 NTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNN-FNGDKSPGNMQYGNKNDFGGPKQQ 464
NT +G+ G + + + + N N F GD G GN + FGG Q
Sbjct: 212 NTYGEGSSASAGAVGDYNGSSGYGSANTYGSSNGGFAGDSQFGGSPVGNSSQFGGDNTQ 270
>At2g40955.1 68415.m05057 hypothetical protein
Length = 679
Score = 30.3 bits (65), Expect = 0.97
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -2
Query: 258 EAEVFVHHIRSWSKVFRSSKIRKTFNVWNFTELFIAVWLRHRMLIVKPVVL 106
EAE+ VH + + V + K + F ++ + +WLRH L++KP +L
Sbjct: 523 EAEL-VHILLGYRDVMFNLKKKGRFRLFQSFSKQLLLWLRHDALLIKPFLL 572
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 30.3 bits (65), Expect = 0.97
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +3
Query: 375 PPKKNNFNGDKSPGNMQYGNKNDFGGPKQQNYNKNYGPKT 494
PP + N N N N GG QQ+ NY KT
Sbjct: 223 PPSLSGSNNHSGGSNRHNANSNGDGGTSQQSNESNYTEKT 262
>At5g55670.1 68418.m06941 RNA recognition motif (RRM)-containing
protein
Length = 710
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/54 (29%), Positives = 18/54 (33%)
Frame = +3
Query: 291 NTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQYGNKNDFGG 452
N N+ N N GG Q F GN G + PG N GG
Sbjct: 352 NNNNNNNNNAIGGNFQGGENRGFGRGNWGRGNAQGMGGRGPGGPMRNRPNGMGG 405
>At2g17110.1 68415.m01974 expressed protein
Length = 733
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Frame = +3
Query: 312 QNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQYGNKNDFGGPKQQNY-NKNYGP 488
++D PK + N N PP SP + +G + + Y N NYG
Sbjct: 109 EDDDSNPKSYLHMNYMKNSYMPPSLVYEQRPSSPQRVHFGESSSSSTSEYNPYLNSNYGS 168
Query: 489 K 491
K
Sbjct: 169 K 169
>At1g79090.2 68414.m09222 expressed protein 11408 (cDNA not
full-length)
Length = 793
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 145 PDRNEQFGKIPYIKGLPDFGGPKNFGPRPNM 237
PD+ IPY G P G P NF P PN+
Sbjct: 209 PDQRLGHPNIPYQSGGPQMGSP-NFSPFPNL 238
>At1g79090.1 68414.m09221 expressed protein 11408 (cDNA not
full-length)
Length = 793
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 145 PDRNEQFGKIPYIKGLPDFGGPKNFGPRPNM 237
PD+ IPY G P G P NF P PN+
Sbjct: 209 PDQRLGHPNIPYQSGGPQMGSP-NFSPFPNL 238
>At4g15096.1 68417.m02320 hypothetical protein
Length = 679
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -2
Query: 258 EAEVFVHHIRSWSKVFRSSKIRKTFNVWNFTELFIAVWLRHRMLIVKPVVL 106
EAE+ VH + + + + K + F ++ + +WLRH L++KP +L
Sbjct: 523 EAEL-VHILLGYRDMMFNLKKKGRFRLFQSFSRQLLLWLRHDALLIKPFLL 572
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 115 GFHNQHPMPQPDRNEQFGKIPYIKGLPDFGGPKNFGPRP 231
G N P P N G +P + G P G F P P
Sbjct: 205 GHPNGAHTPSPTTNHLMGSVPKVGGFPPLGAHGPFQPTP 243
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 115 GFHNQHPMPQPDRNEQFGKIPYIKGLPDFGGPKNFGPRP 231
G N P P N G +P + G P G F P P
Sbjct: 205 GHPNGAHTPSPTTNHLMGSVPKVGGFPPLGAHGPFQPTP 243
>At3g15000.1 68416.m01897 expressed protein similar to DAG protein
(required for chloroplast differentiation and palisade
development) GB:Q38732 [Antirrhinum majus]
Length = 395
Score = 29.1 bits (62), Expect = 2.2
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +3
Query: 324 GGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQYGNKNDFGGPK-QQNYN----KNYG 485
GG P N G PP NN G + P +N+ GGP+ QNY NYG
Sbjct: 268 GGSAPPPPHMGQNYG--PPPPNNMGGPRHPPPYGAPPQNNMGGPRPPQNYGGTPPPNYG 324
>At1g71410.1 68414.m08247 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 909
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = +3
Query: 315 NDFGGPKQFRPRNN----FNNGNQPPKKNNFNGDKSPGNMQYGNKNDFGGPKQQNYNKNY 482
N+ G F+ NN F++ + K G++ N FG PKQ ++
Sbjct: 784 NNLPGGTHFQTANNDNWAFSSASLSSLKPPQQGNQGISANNQDPLNSFGVPKQSQGMPSF 843
Query: 483 GPKTYNNQNAMGMSSL 530
+YNNQ +SS+
Sbjct: 844 TSGSYNNQKPADISSI 859
>At5g65070.1 68418.m08185 MADS-box protein (MAF4) contains Pfam
profile PF00319: SRF-type transcription factor
(DNA-binding and dimerisation domain); contains Pfam
profile PF01486: K-box region
Length = 200
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 349 EIILTMVTNHQRKTTLMETNHQEICNMAIKM 441
E+++ +V HQ K L+ +Q + N IKM
Sbjct: 137 ELMMELVKTHQEKEKLLREENQSLTNQLIKM 167
>At4g28300.2 68417.m04053 hydroxyproline-rich glycoprotein family
protein
Length = 438
Score = 28.3 bits (60), Expect = 3.9
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 46 IPTRP*SPSKLINRLSTIKMQYNGFHNQHPMPQPDRNEQFGKIPYIKGLPDFGGPKNFGP 225
+P+ P PS N + Y G Q+P PQP + +Q + Y++G P GG + P
Sbjct: 319 LPSGPPPPSGYANAM------YEGGRMQYPPPQPQQQQQ--QAHYLQG-PQGGG---YSP 366
Query: 226 RPN 234
+P+
Sbjct: 367 QPH 369
>At4g28300.1 68417.m04052 hydroxyproline-rich glycoprotein family
protein
Length = 496
Score = 28.3 bits (60), Expect = 3.9
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 46 IPTRP*SPSKLINRLSTIKMQYNGFHNQHPMPQPDRNEQFGKIPYIKGLPDFGGPKNFGP 225
+P+ P PS N + Y G Q+P PQP + +Q + Y++G P GG + P
Sbjct: 377 LPSGPPPPSGYANAM------YEGGRMQYPPPQPQQQQQ--QAHYLQG-PQGGG---YSP 424
Query: 226 RPN 234
+P+
Sbjct: 425 QPH 427
>At2g06860.1 68415.m00768 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 938
Score = 28.3 bits (60), Expect = 3.9
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = +3
Query: 375 PPKKNNFNGDKSPGNMQYGNKNDFGGPKQQNYNKNYGPKTYNNQ--NAMGMSSLNLFLGN 548
P K + F+G P +Q +K GPK KT N N + L LFL
Sbjct: 221 PFKNDMFDGACFPSQIQLASKKQKRGPKSNATRNRKAAKTSKNHETNLRRLGVLRLFLWT 280
Query: 549 L 551
L
Sbjct: 281 L 281
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +3
Query: 315 NDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQYGNKNDFGGPKQ 461
N FG Q P N+ NG Q +N + + PGN G GG Q
Sbjct: 161 NSFGVSGQL-PTNHSTNGTQSSMPSNQSSNAPPGNTSDGEPG-IGGQSQ 207
>At4g25750.1 68417.m03707 ABC transporter family protein Bactrocera
tryoni membrane transporter (white) gene, PID:g3676298
Length = 577
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = -3
Query: 518 SHSILVVVCFRPIILVIILLFRTAKIIFIAILHISW*FVSIKVVFLWWLV 369
SH + + F P +L+I +++ + + F+ L SW ++ V+ +W +V
Sbjct: 392 SHILANTLVFLPYLLLIAIIY-SVSLYFLVGLCFSWQALAYFVLVIWIIV 440
>At3g04980.1 68416.m00541 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 1165
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 303 DGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSP 413
+G+ DF P + ++ F ++P KK +KSP
Sbjct: 366 EGSDGDFVSPPNKKTKSGFEFESEPNKKQTAEDNKSP 402
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = +1
Query: 124 NQHPMPQPDRNEQFGKIPYIKGLPDFGGPKNFGPRPN 234
N P P N G +P +G P G F P P+
Sbjct: 208 NDARAPSPVNNPLLGSLPKAEGFPPLGAHGPFQPTPS 244
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = +1
Query: 124 NQHPMPQPDRNEQFGKIPYIKGLPDFGGPKNFGPRPN 234
N P P N G +P +G P G F P P+
Sbjct: 208 NDARAPSPVNNPLLGSLPKAEGFPPLGAHGPFQPTPS 244
>At5g52710.1 68418.m06543 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 451
Score = 27.1 bits (57), Expect = 9.0
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 7/107 (6%)
Frame = +3
Query: 237 DEQKLQPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPG 416
+E K Q ++++ + +K D G + + R N QP +++ +++ G
Sbjct: 175 EEPKKQSEAGGSKLQPEQLSKKKNIYEDAYG-EHLKKRQGINQAKQPAFYDDWLLEEAHG 233
Query: 417 --NMQYGNKND-----FGGPKQQNYNKNYGPKTYNNQNAMGMSSLNL 536
N Q G K + +GG Q K K + Q G ++LNL
Sbjct: 234 PFNQQQGFKQENLLPIYGGAHAQGLYKQNANKVFQPQPKGGFAALNL 280
>At5g43250.1 68418.m05285 transcription factor, putative similar to
heme activated protein GI:6289057 from (Arabidopsis
thaliana) GI:14577940 CCAAT-binding protein subunit HAP5
{Hypocrea jecorina} similar to Transcription factor
GB:CAA74053 GI:2398533 from [Arabidopsis thaliana]
similarity to transcription factor Hap5a similar to
transcription factor Hap5a [Arabidopsis
thaliana](GI:6523090)
Length = 130
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 288 NHSLLH*NHFEAEVFVHHIRSWSKVFRSSKIRKTFNV 178
N LH + E+F+H + S V + K RKT N+
Sbjct: 31 NSEALHVITYSTELFLHFLAEKSAVVTAEKKRKTVNL 67
>At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to SP|Q9Z1T6 FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68)
(1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
(PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF01363: FYVE zinc finger, PF00118:
TCP-1/cpn60 chaperonin family
Length = 1756
Score = 27.1 bits (57), Expect = 9.0
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +3
Query: 252 QPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQ 425
+P N+ +E + + +DG++ D G RP N+FN +K+ + DKS G M+
Sbjct: 315 EPENEEDE-REAVLSDDDGDEGDRGDWGYLRPSNSFN------EKDFHSKDKSSGAMK 365
>At3g25590.1 68416.m03186 expressed protein
Length = 423
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/84 (19%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +3
Query: 258 RNDFNEVKNDYNTKNDGNQ-NDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSP-GNMQYG 431
+++F+E + + +G + ++F ++NF+ ++PP+++ F KS +Y
Sbjct: 236 KSNFSETTEHWKSNFEGGRKSNFSETTTENRKSNFSE-SEPPRRSGFEARKSNFSETEYP 294
Query: 432 NKNDFGGPKQQNYNKNYGPKTYNN 503
+ + N + P T N
Sbjct: 295 TRRSNFSETEYNTRRGNNPATAEN 318
>At2g20760.1 68415.m02440 expressed protein
Length = 338
Score = 27.1 bits (57), Expect = 9.0
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Frame = +3
Query: 294 TKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGD-KSPGNMQYG---NKNDFGGPKQ 461
T + DFGG F +Q ++FNGD SP +G +DF P +
Sbjct: 13 THSPSEHEDFGGYDNFSEAQQPPTQHQSGGFSSFNGDPASPNGYGFGASSPNHDFSSPFE 72
Query: 462 QNYNKNYG 485
+ N G
Sbjct: 73 SSVNDANG 80
>At1g32830.1 68414.m04046 hypothetical protein similar to At2g04970,
At2g15200, At2g14140, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 707
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/52 (21%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 240 EQKLQPRNDFNEVKNDYNTKNDGNQNDFGGPKQFR-PRNNFNNGNQPPKKNN 392
E+K++ +++N+V + N K ++ +++ ++ NNG P +K +
Sbjct: 456 EEKVEEHDEYNDVLKEENVKEHDEHDEIEDQEEYAILSDDENNGTAPTEKES 507
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,730,626
Number of Sequences: 28952
Number of extensions: 284676
Number of successful extensions: 991
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1131744440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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