Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0292
         (480 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    24   0.84 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.9  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   1.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   4.5  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   5.9  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.8  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.8  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.8 bits (49), Expect = 0.84
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = +2

Query: 89  SASLYTLAKPESRSVMPAGSFTAWSTASSLMARC--PQTR-PSGVETILSTLSSARPERQ 259
           SA    + +P   SV P      W  A   + R   PQT  P+G   +   L   +P R+
Sbjct: 59  SAHTVLIPQPLHPSV-PRLGHPQWPFAWGSLXRSSSPQTSAPTGPPIVRCALRKHKPNRK 117

Query: 260 ARTP 271
            RTP
Sbjct: 118 PRTP 121


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 106 VGQAGVQIGNACWELYCLEHGIQPDGQMPTD 198
           +G+  V +    W LYC   G  P GQ+  D
Sbjct: 345 LGELAVCVNERPWSLYC---GEPPCGQLNPD 372


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +3

Query: 192 HRQDHRGWRRFFQHFLQRDRSGKHVPR 272
           +R++ +GW+   +H L  ++    VPR
Sbjct: 120 YRENKQGWQNSIRHNLSLNKCFVKVPR 146


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -3

Query: 451 CEFCPKPNLLISFPMV 404
           C+ C   N+L  FP++
Sbjct: 243 CDMCGAINMLFGFPII 258


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 205 IGGGDDSFNTFFSETGAASTY 267
           +GGGD S N+      A  TY
Sbjct: 112 LGGGDTSPNSALQRARADKTY 132


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 139 CWELYCLEHGIQPDGQMPTDKT 204
           CW  Y +   +Q  GQ+P  +T
Sbjct: 263 CWSPYIIFDLLQVFGQIPGTQT 284


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +3

Query: 102 TRWPSRSPDR*CLLGALLPGARHPA*WPD 188
           T W   + ++ C+ G L     H   WP+
Sbjct: 117 TCWNGTATEQLCIGGLLYNERTHSCDWPE 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,227
Number of Sequences: 336
Number of extensions: 2668
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)