Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0292
(480 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 151 2e-37
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 147 5e-36
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 133 8e-32
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 111 2e-25
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 72 3e-13
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 72 3e-13
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 72 3e-13
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 71 4e-13
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 70 1e-12
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 69 3e-12
03_01_0034 + 318432-318825,318902-319851 68 3e-12
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 66 1e-11
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 48 4e-06
08_01_0312 + 2764744-2767390,2767632-2767990 31 0.37
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.64
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 0.85
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 29 1.5
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 1.5
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 28 3.4
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 28 3.4
07_01_0284 - 2082249-2082256,2082496-2083009 27 7.9
04_04_1189 + 31586991-31587291,31587358-31587397,31587449-315875... 27 7.9
03_05_0246 + 22333172-22333417 27 7.9
03_04_0182 - 18196447-18196482,18197058-18197149,18197262-18197544 27 7.9
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 151 bits (367), Expect = 2e-37
Identities = 71/133 (53%), Positives = 83/133 (62%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F L+ ++ + ++ VDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 442 RIRKLADQCTGLQ 480
RIRKLAD CTGLQ
Sbjct: 121 RIRKLADNCTGLQ 133
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 147 bits (356), Expect = 5e-36
Identities = 69/133 (51%), Positives = 83/133 (62%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F L+ ++ + ++ VDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 442 RIRKLADQCTGLQ 480
RIRKLAD CTGLQ
Sbjct: 121 RIRKLADNCTGLQ 133
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 133 bits (321), Expect = 8e-32
Identities = 63/133 (47%), Positives = 78/133 (58%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGA
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F L+ ++ + ++ VDL LD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 442 RIRKLADQCTGLQ 480
R+RKLAD CTGLQ
Sbjct: 121 RVRKLADNCTGLQ 133
Score = 118 bits (283), Expect = 3e-27
Identities = 51/66 (77%), Positives = 58/66 (87%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHY 404
F F +GKHVPRA+FVDLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+A GHY
Sbjct: 49 FNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 405 TIGKEI 422
T+GKEI
Sbjct: 109 TVGKEI 114
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 111 bits (268), Expect = 2e-25
Identities = 49/69 (71%), Positives = 57/69 (82%)
Frame = +3
Query: 216 RRFFQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAP 395
R F F SGKHVPRA+FVDLEPTV+DEV+TG YRQLFHPEQLI+ KEDAANN+A
Sbjct: 106 RDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFAR 165
Query: 396 GHYTIGKEI 422
GHYT+G+E+
Sbjct: 166 GHYTVGREV 174
Score = 81.4 bits (192), Expect = 3e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 198
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
Score = 52.0 bits (119), Expect = 2e-07
Identities = 32/96 (33%), Positives = 41/96 (42%)
Frame = +1
Query: 193 TDKTIGGGDDSFNTFFSETGAASTYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRK 372
+D T G D+FNTFFSET + P F L+ ++
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKE 157
Query: 373 XXXXXXXXXXXXLERKSVDLVLDRIRKLADQCTGLQ 480
+ R+ VDL LDR+RKLAD CTGLQ
Sbjct: 158 DAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQ 193
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 71.7 bits (168), Expect = 3e-13
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A GHYT G E+
Sbjct: 237 GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 292
Score = 52.8 bits (121), Expect = 1e-07
Identities = 36/139 (25%), Positives = 54/139 (38%)
Frame = +1
Query: 64 KKTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFS 243
KK + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYN 232
Query: 244 ETGAASTYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKS 423
E P F +N + + +
Sbjct: 233 EASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 292
Query: 424 VDLVLDRIRKLADQCTGLQ 480
+D VLD +RK A+ C LQ
Sbjct: 293 IDSVLDVVRKEAENCDCLQ 311
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 71.7 bits (168), Expect = 3e-13
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A GHYT G E+
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 47.6 bits (108), Expect = 5e-06
Identities = 33/133 (24%), Positives = 50/133 (37%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDL--QLERVNVYYNEASCGR 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + +D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 442 RIRKLADQCTGLQ 480
+RK A+ C LQ
Sbjct: 119 VVRKEAENCDCLQ 131
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 71.7 bits (168), Expect = 3e-13
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A GHYT G E+
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 48.4 bits (110), Expect = 3e-06
Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 3/136 (2%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 252
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGTSDLQLERVNVYYNEAS 55
Query: 253 AASTYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDL 432
P F +N + + + +D
Sbjct: 56 CGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
Query: 433 VLDRIRKLADQCTGLQ 480
VLD +RK A+ C LQ
Sbjct: 116 VLDVVRKEAENCDCLQ 131
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 71.3 bits (167), Expect = 4e-13
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
G++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A GHYT G E+
Sbjct: 57 GRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 46.4 bits (105), Expect = 1e-05
Identities = 33/133 (24%), Positives = 49/133 (36%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + +D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 442 RIRKLADQCTGLQ 480
+RK A+ C LQ
Sbjct: 119 VVRKEAENCDCLQ 131
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 69.7 bits (163), Expect = 1e-12
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
G++VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A GHYT G E+
Sbjct: 57 GRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 46.4 bits (105), Expect = 1e-05
Identities = 32/133 (24%), Positives = 49/133 (36%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDL--QLERINVYYNEASGGR 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + +D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 442 RIRKLADQCTGLQ 480
+RK A+ C LQ
Sbjct: 119 VVRKEAENCDCLQ 131
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 68.5 bits (160), Expect = 3e-12
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
G+ VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A GHYT G E+
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 46.4 bits (105), Expect = 1e-05
Identities = 33/133 (24%), Positives = 49/133 (36%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + +D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 442 RIRKLADQCTGLQ 480
+RK A+ C LQ
Sbjct: 119 VVRKEAENCDCLQ 131
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 68.1 bits (159), Expect = 3e-12
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
G+ VPRAV +DLEP +D VR+G Y +F P+ + G+ A NN+A GHYT G E+
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 47.6 bits (108), Expect = 5e-06
Identities = 33/133 (24%), Positives = 49/133 (36%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDL--QLERVNVYYNEASCGR 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + +D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 118
Query: 442 RIRKLADQCTGLQ 480
+RK A+ C LQ
Sbjct: 119 VVRKEAENCDCLQ 131
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 66.5 bits (155), Expect = 1e-11
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
G+HVPRAV +DLEP +D +R+G +F P+ + G+ A NN+A GHYT G E+
Sbjct: 57 GRHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 47.2 bits (107), Expect = 7e-06
Identities = 34/133 (25%), Positives = 48/133 (36%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTY--TGTSPQQLERINVYFNEASGGR 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + +D VLD
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 442 RIRKLADQCTGLQ 480
+RK A+ C LQ
Sbjct: 119 VVRKEAENCDCLQ 131
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 48.0 bits (109), Expect = 4e-06
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +1
Query: 85 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 240
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFF 52
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +3
Query: 234 FLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYAPGHY 404
F Q D ++PRA+ VDLEP V++ ++ YR L++ E + + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYH 109
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 182 ARCPQTRPSGVETILSTLSSARPERQ 259
+RCPQ RPS + +LS L ARP+R+
Sbjct: 969 SRCPQERPS-MREVLSMLQEARPKRK 993
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 30.7 bits (66), Expect = 0.64
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 221 SSPPPMVLSVGIWPSGWMPCSR 156
S P P+ LS I SGW+PCSR
Sbjct: 147 SMPYPITLSAVISLSGWLPCSR 168
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 30.3 bits (65), Expect = 0.85
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 218 SPPPMVLSVGIWPSGWMPCSR 156
+P P+ LSV + SGW+PC+R
Sbjct: 149 NPYPVNLSVSVGLSGWLPCAR 169
>10_08_0253 -
16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 143 GSFTAWSTASSLMARCPQTRPS-GVETILSTLSSARPER 256
GSF+A + A+ L+ARCP R V + ST P R
Sbjct: 5 GSFSAAAAAARLLARCPALRADPRVLALASTAGGGGPSR 43
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 215 PPPMVLSVGIWPSGWMPCSR 156
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 125 RSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPE 253
++ M A T+ S +S P + PSGV L + SSA PE
Sbjct: 690 QTAMAASQATSISRGASQPLAVPNSMPSGVNFPLQSSSSAPPE 732
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 209 PMVLSVGIWPSGWMPCSR 156
P+ LS I SGW+PCSR
Sbjct: 184 PVTLSAVIGLSGWLPCSR 201
>07_01_0284 - 2082249-2082256,2082496-2083009
Length = 173
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 254 APVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 126
+P+ K E PPP + I W P + ++QQ +PI
Sbjct: 63 SPIFAKLAAAEPPPPPSTTAPIIAAPAWAPLLQFAATQQIIPI 105
>04_04_1189 +
31586991-31587291,31587358-31587397,31587449-31587534,
31587535-31588097,31588250-31589913,31589956-31590066,
31590152-31591181,31591234-31591406,31591535-31591814,
31592275-31592331
Length = 1434
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -1
Query: 105 VYRDA--LTHFDLSFFLCLNVELNYNQSSF 22
VYRD + HFDL ++C++ N + S +
Sbjct: 306 VYRDQRIIDHFDLQIWICVSTNFNEDSSGW 335
>03_05_0246 + 22333172-22333417
Length = 81
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2
Query: 371 FLTSNKLFWMKQLSVCASADLINNSRFKIDEDSTGYVLAAPVSLKK 234
FL S LF++ L + L N S FKI + +T +V L+K
Sbjct: 13 FLFSVSLFYIPDLMIDWIDPLTNKSTFKIKDTTTSFVEEKKNELEK 58
>03_04_0182 - 18196447-18196482,18197058-18197149,18197262-18197544
Length = 136
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 164 TASSLMARCPQ-TRPSGVETILSTLSSARPERQARTP 271
T S LMA C + P + ++ LSSA P A TP
Sbjct: 40 TLSLLMALCDRGANPEALAALVRELSSAAPPTAATTP 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,953,954
Number of Sequences: 37544
Number of extensions: 303214
Number of successful extensions: 1059
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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